; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0134 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0134
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA-binding protein with multiple splicing
Genome locationMC09:1224301..1228765
RNA-Seq ExpressionMC09g0134
SyntenyMC09g0134
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059349.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]1.41e-22894.99Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP IP PHPPQILVDNPGRH SDEVRTIFITGLPEDV+ERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPP+WGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMP PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEEL GLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQF----SKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        MRIQ+      NPFGKRKDA YPVSAP VNGTPQAMAYQ
Subjt:  MRIQF----SKNPFGKRKDATYPVSAPSVNGTPQAMAYQ

XP_004141738.1 RNA-binding protein with multiple splicing 2 [Cucumis sativus]1.32e-23296.72Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP IP PHPPQILVDNPGRH SDEVRTIFITGLPEDV+ERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPP+WGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMP PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEEL GLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        MRIQFSKNPFGKRKDA YPVSAP VNGTPQAMAYQ
Subjt:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ

XP_008462228.1 PREDICTED: RNA-binding protein with multiple splicing [Cucumis melo]3.25e-23397.01Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP IP PHPPQILVDNPGRH SDEVRTIFITGLPEDV+ERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPP+WGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMP PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEEL GLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        MRIQFSKNPFGKRKDA YPVSAP VNGTPQAMAYQ
Subjt:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ

XP_022147254.1 RNA-binding protein with multiple splicing 2 [Momordica charantia]6.41e-242100Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALF
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALF
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALF

Query:  SNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPV
        SNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPV
Subjt:  SNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPV

Query:  PPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGM
        PPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGM
Subjt:  PPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGM

Query:  RIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        RIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
Subjt:  RIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ

XP_038898734.1 RNA-binding protein with multiple splicing 2 [Benincasa hispida]1.49e-23197.01Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP IP PHP QILVDNPGRH SDEVRTIFITGLPEDV+ERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPP+WGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMP PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEEL GLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        MRIQFSKNPFGKRKDATYPVSAP  NGTPQAMAYQ
Subjt:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ

TrEMBL top hitse value%identityAlignment
A0A0A0K6S7 RRM domain-containing protein6.41e-23396.72Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP IP PHPPQILVDNPGRH SDEVRTIFITGLPEDV+ERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPP+WGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMP PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEEL GLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        MRIQFSKNPFGKRKDA YPVSAP VNGTPQAMAYQ
Subjt:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ

A0A1S3CH02 RNA-binding protein with multiple splicing1.57e-23397.01Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP IP PHPPQILVDNPGRH SDEVRTIFITGLPEDV+ERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPP+WGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMP PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEEL GLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        MRIQFSKNPFGKRKDA YPVSAP VNGTPQAMAYQ
Subjt:  MRIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ

A0A5A7V0M8 RNA-binding protein with multiple splicing6.83e-22994.99Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP IP PHPPQILVDNPGRH SDEVRTIFITGLPEDV+ERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPP+WGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMP PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEEL GLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQF----SKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        MRIQ+      NPFGKRKDA YPVSAP VNGTPQAMAYQ
Subjt:  MRIQF----SKNPFGKRKDATYPVSAPSVNGTPQAMAYQ

A0A5D3BWV1 RNA-binding protein with multiple splicing2.31e-22690.96Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP IP PHPPQILVDNPGRH SDEVRTIFITGLPEDV+ERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPP-IPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPP+WGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG
        VPPVPMP PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEEL GLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG

Query:  MRIQFS-------------------KNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        MRIQ+                     NPFGKRKDA YPVSAP VNGTPQAMAYQ
Subjt:  MRIQFS-------------------KNPFGKRKDATYPVSAPSVNGTPQAMAYQ

A0A6J1D0G5 RNA-binding protein with multiple splicing 23.10e-242100Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALF
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALF
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALF

Query:  SNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPV
        SNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPV
Subjt:  SNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPV

Query:  PPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGM
        PPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGM
Subjt:  PPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGM

Query:  RIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
        RIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ
Subjt:  RIQFSKNPFGKRKDATYPVSAPSVNGTPQAMAYQ

SwissProt top hitse value%identityAlignment
O74452 Cell wall integrity protein scw12.7e-1030.96Show/hide
Query:  LHTEMAKKNLFVKRGIVA---DASAYDQSKRLRTGGDYAHTGYSSPSPFHAPP--PPMWGPHGYMAPPPPPYDPYGGYPVP-PVPMPTPAPVPAPSSYVP
        ++T +A+  L  ++G  A   ++SA     R+ +    A++ +S+ SP   PP  P     + + A    P  P+  Y     +    PA  P  ++   
Subjt:  LHTEMAKKNLFVKRGIVA---DASAYDQSKRLRTGGDYAHTGYSSPSPFHAPP--PPMWGPHGYMAPPPPPYDPYGGYPVP-PVPMPTPAPVPAPSSYVP

Query:  VQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGMRIQFSKNPFGKRKDAT
              NPPCNT+++GNL  + +EEEL  LFS Q G+K++    +    +CF+EFE++  A     +LQG  + SS   G+R+ FSKNP G R  ++
Subjt:  VQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGMRIQFSKNPFGKRKDAT

P34761 Protein WHI33.4e-1339.42Show/hide
Query:  PVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHT-------VCFIEFEDVNTATNVHHSLQGAVIPS---SGSVGMRIQFSKNP
        P      NPPCNTL++GNL  +  E+EL  LFS Q GF+++    +   +       +CF+EF+DV+ AT     L G  +P    S   G+R+ FSKNP
Subjt:  PVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHT-------VCFIEFEDVNTATNVHHSLQGAVIPS---SGSVGMRIQFSKNP

Query:  FGKR
         G R
Subjt:  FGKR

Q07655 Protein WHI46.8e-1437.1Show/hide
Query:  PVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKI---LRQERH-------TVCFIEFEDVNTATNVHHSLQGAVIPS-----SGSVGMRIQ
        P      NPPCNTL++GNL  +  E+EL  LFS Q GF+++     +    H        +CF+EFEDV+ AT     L G+ +P      +   G+R+ 
Subjt:  PVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKI---LRQERH-------TVCFIEFEDVNTATNVHHSLQGAVIPS-----SGSVGMRIQ

Query:  FSKNPFGKRKDATYPVSAPSVNGT
        FSKNP G R   +   S  S NG+
Subjt:  FSKNPFGKRKDATYPVSAPSVNGT

Q6DH13 RNA-binding protein, mRNA-processing factor 2a3.7e-1245.12Show/hide
Query:  DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        +EVRT+F++GLP D++ REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD ES   L  E AK N
Subjt:  DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q8VC52 RNA-binding protein with multiple splicing 26.4e-1243.9Show/hide
Query:  DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        +EVRT+F++GLP D++ REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-2935.58Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGS-DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP        PIP      + +      G+ DEVRT+F+ GLPEDV+ RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGS-DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P    
Subjt:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPVPPV

Query:  PMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS--GSVGMR
         +   A   AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS  G V +R
Subjt:  PMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS--GSVGMR

Query:  IQFSKNPFGKRK
        +Q++++  G RK
Subjt:  IQFSKNPFGKRK

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-2735.64Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGS-DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP        PIP      + +      G+ DEVRT+F+ GLPEDV+ RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGS-DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P    
Subjt:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPVPPV

Query:  PMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS--GSVGMR
         +   A   AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS  G V +R
Subjt:  PMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS--GSVGMR

Query:  IQF
        +Q+
Subjt:  IQF

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-2735.62Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGS-DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP        PIP      + +      G+ DEVRT+F+ GLPEDV+ RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGS-DEVRTIFITGLPEDVRERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P    
Subjt:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPVPPV

Query:  PMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS
         +   A   AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS
Subjt:  PMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSS

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.7e-2130.48Show/hide
Query:  PRPHPPQ--ILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEM
        P   PPQ  +L D PG      + T+F++GLP DV+ RE+ NL R   G+E+ Q+ +  +G++ + FA F++ +FA+AA + L  + FD ++ S LH E+
Subjt:  PRPHPPQ--ILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEM

Query:  AKKNLFVKRG------IVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPVPPVPMPTPAPVPAPSSYVPVQNTK
        A+ N   K        +V D    + SK   +  D +  G S P     P           +  P   D             +     APS+   ++   
Subjt:  AKKNLFVKRG------IVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPVPPVPMPTPAPVPAPSSYVPVQNTK

Query:  DN----PPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGMRIQFSKNPFGKR
        +       C+TLFI NLG N  E+EL  L S  PGF  +KI  +    V F +FE++  AT+  + LQG ++ SS   GM I+++++   K+
Subjt:  DN----PPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGMRIQFSKNPFGKR

AT3G21215.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-14276.45Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPIP-----RPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPM
        MAG GIHPYHQQWP A A  PPPP   ++AAPP P      P PP +LVDN  R   DE+RTIFI GLP+DV+EREL NLLRWLPGYEASQVNFKGEKPM
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPIP-----RPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPM

Query:  GFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWG-PHGYMAPPPPPYDP
        GFALFS AQFA+AAKD LQ MVFDAESKSV+HTEMAKKNLFVKRGIV D++AYDQSKRLRTGGD  H+ Y SPSPFH PPPP+WG PHGYMAP PPPYDP
Subjt:  GFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWG-PHGYMAPPPPPYDP

Query:  YGGYPVPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPS
        Y GY  PPVPMPTP P+ APSSYVPVQN KDNPPCNTLFIGNLGEN+NEEEL  L S QPGFKQMKILRQERHTVCFIEFEDVN+ATNVHH+LQGAVIPS
Subjt:  YGGYPVPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPS

Query:  SGSVGMRIQFSKNPFGKRKD----ATYPVSAPSVNGTPQAMAYQ
        SGS+GMRIQ+SKNP+GKRK+    + +P  +PS NG   A+ YQ
Subjt:  SGSVGMRIQFSKNPFGKRKD----ATYPVSAPSVNGTPQAMAYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGCACAGGAATCCACCCGTACCACCAGCAATGGCCTGCTGCGGCAGCCGCCCCTCCTCCGCCTCCGCCACAAGCCGCCGCCGCCGCTCCTCCTATTCCGCGCCC
ACACCCTCCTCAGATCCTCGTCGACAACCCCGGCCGCCATGGTTCCGACGAGGTTCGAACTATATTTATAACAGGTCTTCCTGAAGATGTAAGAGAGAGAGAACTACAGA
ATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTGAATTTTAAAGGTGAAAAGCCTATGGGATTTGCTCTCTTCTCCAATGCCCAGTTTGCTATTGCTGCTAAA
GATGCCCTTCAGGATATGGTTTTTGATGCCGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTCGTTAAACGAGGCATTGTTGCTGATGCAAGTGC
TTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGACTATGCCCACACTGGATATTCAAGCCCATCACCTTTTCATGCACCTCCACCCCCTATGTGGGGGCCTCATGGGT
ATATGGCTCCACCTCCTCCTCCATACGATCCATATGGAGGTTACCCTGTTCCTCCTGTACCTATGCCTACTCCTGCACCTGTACCAGCACCTAGCAGCTATGTGCCTGTT
CAGAACACGAAGGATAATCCTCCTTGCAATACCTTATTCATTGGCAATCTGGGGGAAAATGTAAATGAAGAGGAGCTGGGAGGTCTTTTCAGCGTACAACCTGGATTTAA
GCAAATGAAGATTCTAAGGCAGGAAAGGCATACGGTCTGCTTCATTGAGTTTGAAGATGTGAACACTGCCACCAATGTGCATCATAGTTTGCAGGGTGCTGTTATACCTA
GTTCTGGCTCTGTGGGCATGAGAATACAATTTTCAAAGAACCCATTTGGGAAAAGGAAAGATGCTACCTACCCTGTCTCCGCACCCAGTGTCAATGGAACTCCACAAGCT
ATGGCATACCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATCCGTATCACAATTCACAATTCACAGAGCGGAGGAGGCCAAGAAATCGAGCTAATTTATGCAAACAAGAAGTTGAAAGGAGAATTTTGGTAGCCCTCCATAGTCGCTCA
CTTCCACTGGTTAAGCATGGCCGGCACAGGAATCCACCCGTACCACCAGCAATGGCCTGCTGCGGCAGCCGCCCCTCCTCCGCCTCCGCCACAAGCCGCCGCCGCCGCTC
CTCCTATTCCGCGCCCACACCCTCCTCAGATCCTCGTCGACAACCCCGGCCGCCATGGTTCCGACGAGGTTCGAACTATATTTATAACAGGTCTTCCTGAAGATGTAAGA
GAGAGAGAACTACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTGAATTTTAAAGGTGAAAAGCCTATGGGATTTGCTCTCTTCTCCAATGCCCAGTT
TGCTATTGCTGCTAAAGATGCCCTTCAGGATATGGTTTTTGATGCCGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTCGTTAAACGAGGCATTG
TTGCTGATGCAAGTGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGACTATGCCCACACTGGATATTCAAGCCCATCACCTTTTCATGCACCTCCACCCCCTATG
TGGGGGCCTCATGGGTATATGGCTCCACCTCCTCCTCCATACGATCCATATGGAGGTTACCCTGTTCCTCCTGTACCTATGCCTACTCCTGCACCTGTACCAGCACCTAG
CAGCTATGTGCCTGTTCAGAACACGAAGGATAATCCTCCTTGCAATACCTTATTCATTGGCAATCTGGGGGAAAATGTAAATGAAGAGGAGCTGGGAGGTCTTTTCAGCG
TACAACCTGGATTTAAGCAAATGAAGATTCTAAGGCAGGAAAGGCATACGGTCTGCTTCATTGAGTTTGAAGATGTGAACACTGCCACCAATGTGCATCATAGTTTGCAG
GGTGCTGTTATACCTAGTTCTGGCTCTGTGGGCATGAGAATACAATTTTCAAAGAACCCATTTGGGAAAAGGAAAGATGCTACCTACCCTGTCTCCGCACCCAGTGTCAA
TGGAACTCCACAAGCTATGGCATACCAGTAGCACGAAGGGGATGTACTCTGTTCTTTTTGCTCCGACAAATACAAGCACTAGATGATAGGATGCATCTTGCAGCAGTTGC
ATGCATCCATGATCCATTTCATATCAAGTCATCAGCATTTTCATCTCCATGGGAATGAATACTCATATTGCTGTCACAAACATTCCATTTGGAAGCATGCTACTCTAGCT
AGCCCCTAATGGGACATGCATTTATCAGAACTCAGAAGATTTAAGTACCTGGATTACTTAATAGGGGCTCAGATATTGCTATCATTTGTAGGGCAAGACGACTGTCCAAG
ACTCCTTGTGGAGCTGAAGTTAACATCAGTTGAGGGTGAAGTGTATATATAATTTTTATTTTCTATAATTTCTTGAATCGAAGAAAAGAAGACAGATTCAATCTATGCTT
GCCATTGTCAAGTTTGCTGGATGTACCGGACTTGGCTACAAAACTGGAGGAAATTGATGCCACTGCTCTCTTGTTGGCTGGGTAGGCATATTGGTTGGATGGGAAGAAAA
GAATGGTTTAATCAAGATCTGGGTTAACTTATTCTTGTTTAGGATCGACATTCTAATTGTTTTCATGCCATTGTCCTTCAAACTTTTATCTGGTTGACTGAAGTGTGAGA
CTGATATTGCTCTCTGATATGAGTTCAGAGGAAAACATTTTTTTGTCCCTTTGTGAGATGAAGTTGCTTTTCACCTACCTTTGAAAGGATTAAAGAGTAAGAGAGAGAAT
GCAATTCCTTCTATGGCTCGTCAGGAACGGAAAAAAGGAATTTAAGGG
Protein sequenceShow/hide protein sequence
MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPIPRPHPPQILVDNPGRHGSDEVRTIFITGLPEDVRERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAK
DALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPMWGPHGYMAPPPPPYDPYGGYPVPPVPMPTPAPVPAPSSYVPV
QNTKDNPPCNTLFIGNLGENVNEEELGGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVGMRIQFSKNPFGKRKDATYPVSAPSVNGTPQA
MAYQ