CuGenDBv2

Gene ID	MC09g0192
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	40S ribosomal protein S3
Genome location	MC09:1684688..1687218
RNA-Seq Expression	MC09g0192
Synteny	MC09g0192
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005634 - nucleus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001351 - Ribosomal protein S3, C-terminal IPR004044 - K Homology domain, type 2 IPR005703 - Ribosomal protein S3, eukaryotic/archaeal IPR009019 - K homology domain superfamily, prokaryotic type IPR015946 - K homology domain-like, alpha/beta IPR018280 - Ribosomal protein S3, conserved site IPR036419 - Ribosomal protein S3, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022149321.1 40S ribosomal protein S3-3 [Momordica charantia]

7.91e-162

100

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

XP_022953609.1 40S ribosomal protein S3-3-like [Cucurbita moschata]

1.36e-160

99.15

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIHTPKEEE+FIRPVAVIPTAEIEV AA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

XP_022964488.1 40S ribosomal protein S3-3 [Cucurbita moschata]

1.86e-160

99.15

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIHTPKEEEEFIRP AV PTAEIEVAAA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

XP_023000220.1 40S ribosomal protein S3-3 isoform X1 [Cucurbita maxima]

6.50e-161

99.58

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIH PKEEEEFIRPVAVIPTAEIEVAAA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

XP_023514160.1 40S ribosomal protein S3-3 [Cucurbita pepo subsp. pepo]

3.22e-161

99.58

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIHTPKEEEEFIRP AVIPTAEIEVAAA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D813 40S ribosomal protein S3-3

3.83e-162

100

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

A0A6J1GQ60 40S ribosomal protein S3-3-like

6.59e-161

99.15

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIHTPKEEE+FIRPVAVIPTAEIEV AA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

A0A6J1HKZ2 40S ribosomal protein S3-3

9.02e-161

99.15

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIHTPKEEEEFIRP AV PTAEIEVAAA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

A0A6J1JPM9 40S ribosomal protein S3-3-like

7.69e-160

98.73

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP NSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIHTPKEEE+FIRPVAVIPTAEIEV AA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

A0A6J1KD29 40S ribosomal protein S3-3 isoform X1

3.15e-161

99.58

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA
        PTPLPDLVTIH PKEEEEFIRPVAVIPTAEIEVAAA
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA

SwissProt top hits

e value

%identity

Alignment

P02350 40S ribosomal protein S3-A

1.3e-96

80.52

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEI
          PLPD V+I  PK+E        ++PT  I
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEI

P47835 40S ribosomal protein S3-B

1.3e-96

80.52

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEI
          PLPD V+I  PK+E        ++PT  I
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEI

Q9FJA6 40S ribosomal protein S3-3

3.8e-112

89.52

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTA
         TPLPD+V IHTPKE++ +I P  V+  A
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTA

Q9M339 40S ribosomal protein S3-2

2.8e-110

88.31

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEI
         TPLPD+V IH+PKEEE    P  V   A +
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEI

Q9SIP7 40S ribosomal protein S3-1

1.2e-108

86.38

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPV-AVIPTAEIEVA
         TPLPD+V IH PK++  +  P  A  P   ++ A
Subjt:  PTPLPDLVTIHTPKEEEEFIRPV-AVIPTAEIEVA

Arabidopsis top hits

e value

%identity

Alignment

AT2G31610.1 Ribosomal protein S3 family protein

8.2e-110

86.38

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPV-AVIPTAEIEVA
         TPLPD+V IH PK++  +  P  A  P   ++ A
Subjt:  PTPLPDLVTIHTPKEEEEFIRPV-AVIPTAEIEVA

AT3G53870.1 Ribosomal protein S3 family protein

2.0e-111

88.31

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEI
         TPLPD+V IH+PKEEE    P  V   A +
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTAEI

AT5G35530.1 Ribosomal protein S3 family protein

2.7e-113

89.52

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Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTA
         TPLPD+V IHTPKE++ +I P  V+  A
Subjt:  PTPLPDLVTIHTPKEEEEFIRPVAVIPTA

Sequences

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CDS sequence

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ATGGCTACTCAGATGAGCAAAAAGAGAAAGTTTGTGGCGGATGGAGTGTTCTTTGCGGAGCTTAACGAAGTTCTCACCAGAGAGCTTGCAGAGGATGGCTACTCCGGAGT
CGAGGTTAGGGTCACACCTATGCGGACTGAGATTATCATTAGGGCTACTCGTACACAGAATGTTCTTGGCGAGAAAGGAAGGAGAATCCGAGAATTAACATCTGTTGTTC
AGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTATATGCTGAGAAAGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAATCTCTGCGCTACAAGCTTCTA
GGAGGCCTTGCTGTCAGGAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAGGGATGTGAGGTTATTGTTAGTGGTAAGCTGAGGGCTCAGCGTGC
AAAATCCATGAAATTCAAGGATGGATACATGATATCATCCGGACAGCCAGTGAAAGAGTACATAGACTCGGCCGTGAGACATGTTCTCCTTAGACAGGGTGTTCTGGGTA
TCAAGGTCAAGATCATGCTCGACTGGGACCCGAAGGGCAAGCAAGGTCCACCGACGCCCCTTCCTGATTTGGTTACTATCCATACTCCCAAGGAGGAAGAGGAATTCATT
AGGCCCGTCGCTGTGATTCCAACGGCTGAGATAGAGGTTGCAGCAGCTTAA

mRNA sequence

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GGGTACCATTCTAATTACGGTTGTTTCATGACAATGTAAATTCTATACCTTTCAATATTTTTTTTAATTATAATTTTTAAATAGACGATATATACACATGAATTTTTTAT
TTTTTATTTTGTTTCCATGGCCACGACCCATTAGTTTTCGATAGCCCATTAGTTCTTGTTGGGCCTATAGAAAAGCTGAAGGCCCAATCGCAGACGTTAAAAACTTTCAT
TTTAGGATATTTAATTTCTTCAGGCTGGCTCAGGGTTTCCTAGGGTTTTCTTCATCTTCAACCTAGAGTTCACGCAGAGGATCGGTGAACGGCGACAGCAGCAGCAACCA
AACATGGCTACTCAGATGAGCAAAAAGAGAAAGTTTGTGGCGGATGGAGTGTTCTTTGCGGAGCTTAACGAAGTTCTCACCAGAGAGCTTGCAGAGGATGGCTACTCCGG
AGTCGAGGTTAGGGTCACACCTATGCGGACTGAGATTATCATTAGGGCTACTCGTACACAGAATGTTCTTGGCGAGAAAGGAAGGAGAATCCGAGAATTAACATCTGTTG
TTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTATATGCTGAGAAAGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAATCTCTGCGCTACAAGCTT
CTAGGAGGCCTTGCTGTCAGGAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAGGGATGTGAGGTTATTGTTAGTGGTAAGCTGAGGGCTCAGCG
TGCAAAATCCATGAAATTCAAGGATGGATACATGATATCATCCGGACAGCCAGTGAAAGAGTACATAGACTCGGCCGTGAGACATGTTCTCCTTAGACAGGGTGTTCTGG
GTATCAAGGTCAAGATCATGCTCGACTGGGACCCGAAGGGCAAGCAAGGTCCACCGACGCCCCTTCCTGATTTGGTTACTATCCATACTCCCAAGGAGGAAGAGGAATTC
ATTAGGCCCGTCGCTGTGATTCCAACGGCTGAGATAGAGGTTGCAGCAGCTTAAGAGAAGAAGAAAAGAATAGCAGACATGAGGGAGCAAAAAGTAGTCTAGTGTTTCTA
TCATAAATGTCATTTCTTTCAGACCATGGAATTCTAAGTTTTGATAATGTCTTTCTTCTGTTTTGAGTTTTGATTTTGGCATGTTTTTGTTACAAATATTCACACAAACA
TTGTTACTCTACTTTATGACTGGCCCCCTACTGTTTAATCGTAATCTTAATCTGAGTTTGTAATATGT

Protein sequence

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MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLL
GGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFI
RPVAVIPTAEIEVAAA

MC09g0192 (gene) of Bitter gourd (Dali-11) v1 genome