CuGenDBv2

Gene ID	MC09g0257
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Nuclear pore complex protein NUP35
Genome location	MC09:2359757..2363130
RNA-Seq Expression	MC09g0257
Synteny	MC09g0257
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006607 - NLS-bearing protein import into nucleus (biological process) GO:0006999 - nuclear pore organization (biological process) GO:0051028 - mRNA transport (biological process) GO:0031965 - nuclear membrane (cellular component) GO:0044613 - nuclear pore central transport channel (cellular component) GO:0044615 - nuclear pore nuclear basket (cellular component) GO:0003697 - single-stranded DNA binding (molecular function) GO:0005543 - phospholipid binding (molecular function) GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domains	IPR007846 - RNA-recognition motif (RRM) Nup35-type domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR017389 - Nucleoporin, NUP53 IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0051033.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa]

2.90e-215

89.39

Show/hide

Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS  DFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL
        P KNKSNASTSYTP +GQ SRQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGV+QPGALI LPTPREVARPEV+RNC P  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+R Y+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_004141656.1 nuclear pore complex protein NUP35 [Cucumis sativus]

3.54e-216

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Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS  DFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL
        P KNKSNASTSYTP SGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGV+QPGALI LPTPREVARPEVQRNC P  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNG+QINGVLIVGVKPVDPMHRQAL+E++NNPGFMVIPPV SRT+ELLATRGP+R YNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        G ++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_008462444.1 PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]

3.38e-214

89.09

Show/hide

Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS  DFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL
        P KNKSNASTSYTP +GQ SRQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGV+QPGALI LPTPREVARPEV+RNC P  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+  Y+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

XP_022151212.1 nuclear pore complex protein NUP35 [Momordica charantia]

1.29e-238

99.7

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Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPM
        MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPM
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPM

Query:  KNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVL
        KNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEG VQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVL
Subjt:  KNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVL

Query:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN
        REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN
Subjt:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN

Query:  SNARQSGGTIASPSKSLVSKVMDLMFGV
        SNARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  SNARQSGGTIASPSKSLVSKVMDLMFGV

XP_038900103.1 nuclear pore complex protein NUP35 [Benincasa hispida]

8.12e-222

92.73

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Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MNT +HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS  DFSPESGI DYP+SPEIKSDPRTPIQSHDFSS
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL
        P+KNKSNASTSYTP SGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGV+QPGALI LPTPREVARPEVQRNC PA KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNKNG+QINGVLIVGVKPVDPMHRQALDEK+N+PGFMV PPV SRT+ELLATRG VR YNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GNS+ARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7B2 Nuclear pore complex protein NUP35

1.71e-216

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Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS  DFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL
        P KNKSNASTSYTP SGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGV+QPGALI LPTPREVARPEVQRNC P  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNG+QINGVLIVGVKPVDPMHRQAL+E++NNPGFMVIPPV SRT+ELLATRGP+R YNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        G ++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A1S3CH09 Nuclear pore complex protein NUP35

1.64e-214

89.09

Show/hide

Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS  DFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL
        P KNKSNASTSYTP +GQ SRQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGV+QPGALI LPTPREVARPEV+RNC P  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+  Y+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A5A7U592 Nuclear pore complex protein NUP35

1.41e-215

89.39

Show/hide

Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS  DFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL
        P KNKSNASTSYTP +GQ SRQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGV+QPGALI LPTPREVARPEV+RNC P  KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+R Y+LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1DCV4 Nuclear pore complex protein NUP35

6.24e-239

99.7

Show/hide

Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPM
        MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPM
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPM

Query:  KNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVL
        KNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEG VQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVL
Subjt:  KNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVL

Query:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN
        REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN
Subjt:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN

Query:  SNARQSGGTIASPSKSLVSKVMDLMFGV
        SNARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  SNARQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1JYW9 Nuclear pore complex protein NUP35

3.01e-208

87.61

Show/hide

Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS
        MNTT+HRT NSGRQS+FYQDLASPV++R+GKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS  DFSPESGIPDYP+SPE+KSDP TPIQSHDFSS
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS--DFSPESGIPDYPLSPEIKSDPRTPIQSHDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL
        PMK+KSNASTS+TP S QQSRQ SAGFSWWST KGGGSEQEDKGKSSPVEGV+QPGALI L TPREVARPEVQRNC PAGKLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILY+NRS AHKAL+KNG+QING+LIVGVKPVDP+ RQ LDEK+NNPGFMV+PPV SRT EL    GPVR YN QN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN

Query:  GNSNARQSGGT-IASPSKSLVSKVMDLMFGV
        GNS ARQSGGT IASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGT-IASPSKSLVSKVMDLMFGV

SwissProt top hits

e value

%identity

Alignment

O04326 Nuclear pore complex protein NUP35

3.3e-122

68.98

Show/hide

Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDFSS
        M+   HRTP SGRQS+ +QDLASPV++R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DRSDFSPESGI DY  SP+ KSD RTP QS   +  +
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGS-EQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTN
        P K K  AS S++  + QQS+Q S   SWWS SK G S EQ+DKGK SPVEGVVQPGAL+ LP PREVARPEVQR   P G L+EEEWVTVYGFSP DTN
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGS-EQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTN

Query:  LVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQ
        LVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK G+ INGV+IVGVKPVDP+ +QAL+E++NN GFM +PP PS T      R   R   LQ
Subjt:  LVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQ

Query:  NGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV
        NG++ + Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  NGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV

Q66IJ0 Nucleoporin NUP35

3.0e-14

26.11

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Query:  PNSGRQ---SMFYQDLASPVTSRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFS---SPM
        P++G Q        D+ +PV        TP Q  ++  +  R    +   PP PV  T +D+S   P   I D   SP + S P  P ++  FS   +P+
Subjt:  PNSGRQ---SMFYQDLASPVTSRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFS---SPM

Query:  KNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVL
             +S      SG + R  S+ F   S +  G S +                      +P ++     Q +   +    ++ WVTV+GF  A  + +L
Subjt:  KNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVL

Query:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNP--GFMVIPPVPS--------RTTELLATRGP
         +F + G I+KHV    + NWMHI YQ++  A KAL+K+G      +++GVKP          EK++ P    +  PPV +         T    + R  
Subjt:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNP--GFMVIPPVPS--------RTTELLATRGP

Query:  VRTYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG
          TY           +        +S+VSK M+ MFG
Subjt:  VRTYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG

Q68FY1 Nucleoporin NUP35

2.8e-12

26.38

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Query:  RTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIK--SDPRTPIQSHDFSSPMKNKS
        + P  G + M    L SP + + G           +A +   F   DLP P   T + RS   P  G+ +   SP +   S P+  + +H      K+KS
Subjt:  RTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIK--SDPRTPIQSHDFSSPMKNKS

Query:  NASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPE-------------VQRNCFPAGKLNEEEWVTVYGF
         A     P         S G    ST      +       SP+ GV  P     + +P  + +P               Q +   +    ++ WVTV+GF
Subjt:  NASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPE-------------VQRNCFPAGKLNEEEWVTVYGF

Query:  SPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKP-VDPMHRQALDEKI-NNPGFMVIPPV-----PSR--TT
          A  + +L +F + G ILKHV      NWMHI YQ++  A KAL+K+G      +++GVKP +D    +  D  + ++P     PP+     P++  +T
Subjt:  SPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKP-VDPMHRQALDEKI-NNPGFMVIPPV-----PSR--TT

Query:  ELLATRGPVRTYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG
          ++T  P+ T    + +     S        +SLVS+ M+ MFG
Subjt:  ELLATRGPVRTYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG

Q6P6X9 Nucleoporin NUP35

2.1e-15

35.29

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Query:  EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKP-VDPMHRQALDEKINNPGFMVIPPVPSR
        ++ W+TV+GF PA  + +L +F + G ILKHV      NWMH+ YQ++  A KAL+K+G      +++GVKP +D    ++LD K +    +  PPV + 
Subjt:  EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKP-VDPMHRQALDEKINNPGFMVIPPVPSR

Query:  TT---ELLATRGPVRTYN-LQNGNSNARQSGGTIASPSK--SLVSKVMDLMFG
         T    L   R  +R  +     +S+  Q      +P K  S VSK M+ MFG
Subjt:  TT---ELLATRGPVRTYN-LQNGNSNARQSGGTIASPSK--SLVSKVMDLMFG

Q8NFH5 Nucleoporin NUP35

2.1e-15

27.44

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Query:  DLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSR
        DL +PVT +    S  G +  V  +          P P V   +D+S   P   I D   SP + S P T           + + N S   +P  G  S 
Subjt:  DLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSR

Query:  QGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDA
         G+ G S +S +  G           P +  + P  L    T         Q +   +    ++ WVTV+GF  A  + +L +F + G ILKHV      
Subjt:  QGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDA

Query:  NWMHILYQNRSDAHKALNKNGVQINGVLIVGVKP-VDPMHRQALDE-KINNPGFMVIPPVPS-------RTTELLATRGPVRTYNLQNGNSNARQSGGTI
        NWMHI YQ++  A KAL+K+G      +++GVKP +D    ++ D   +++P     PP+ +        +T  ++T  P+ T    + +     S    
Subjt:  NWMHILYQNRSDAHKALNKNGVQINGVLIVGVKP-VDPMHRQALDE-KINNPGFMVIPPVPS-------RTTELLATRGPVRTYNLQNGNSNARQSGGTI

Query:  ASPSKSLVSKVMDLMFG
            +SLVSK M+ MFG
Subjt:  ASPSKSLVSKVMDLMFG

Arabidopsis top hits

e value

%identity

Alignment

AT3G16310.1 mitotic phosphoprotein N' end (MPPN) family protein

2.4e-123

68.98

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Query:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDFSS
        M+   HRTP SGRQS+ +QDLASPV++R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DRSDFSPESGI DY  SP+ KSD RTP QS   +  +
Subjt:  MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDFSS

Query:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGS-EQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTN
        P K K  AS S++  + QQS+Q S   SWWS SK G S EQ+DKGK SPVEGVVQPGAL+ LP PREVARPEVQR   P G L+EEEWVTVYGFSP DTN
Subjt:  PMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGS-EQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTN

Query:  LVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQ
        LVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK G+ INGV+IVGVKPVDP+ +QAL+E++NN GFM +PP PS T      R   R   LQ
Subjt:  LVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQ

Query:  NGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV
        NG++ + Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  NGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV

Sequences

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CDS sequence

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ATGAACACCACTTTGCATAGAACTCCCAACTCGGGGAGGCAGTCAATGTTCTACCAAGATTTAGCATCTCCTGTTACCTCGCGAAAAGGGAAATTTTCAACTCCAGGCCA
GGCGGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCACCAGTTTTTACCTTGGAAGACCGCTCAGATTTCTCTCCTGAGTCTGGCA
TTCCTGATTATCCTCTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCAATCCAAAGTCACGACTTCTCTTCACCGATGAAAAACAAGTCAAATGCCAGCACTTCGTAT
ACACCAACTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGATTTAGTTGGTGGTCAACATCAAAAGGTGGTGGCAGTGAGCAAGAAGATAAAGGAAAAAGTTCCCCAGT
CGAAGGTGTGGTTCAGCCTGGTGCTTTAATCATTCTTCCAACCCCAAGGGAAGTTGCCAGACCAGAAGTGCAGAGAAATTGCTTCCCTGCTGGAAAACTCAACGAGGAAG
AATGGGTTACTGTCTATGGATTCTCCCCTGCTGATACAAATCTAGTTTTGAGGGAATTCGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCTAAT
TGGATGCACATTCTTTATCAGAACCGATCTGATGCCCACAAAGCTCTCAACAAAAATGGCGTTCAAATTAACGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCGAT
GCACCGGCAGGCACTCGACGAAAAGATAAATAATCCAGGATTCATGGTTATCCCTCCGGTGCCTTCTAGAACCACAGAACTCCTTGCAACGAGAGGGCCTGTGCGTACCT
ACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCGGGAGGTACCATTGCTTCGCCATCGAAATCGTTGGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAG

mRNA sequence

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GTCCAAATAAGATCACCAATCGCACCGCCAAACCGTATTCCCTCGCTACTGGCGAAGTTGGAGTTTTAGGGTTTCAAATTCCATAATTTTTAGGTCTTTTCGTCCCGTTT
GGGCGTCTCTATTCCAAAATACTTTCGGGAGGGAAAACTCCGAACGGAAAATCAAATTCCCGAGGCCCTCTTGCATCTCGATTCATCCAATCCAATCGATCCAGTTCGAA
GCAGAGCTCCGGCAGTTTCTGAAGTCGACATATTTATCTTCTAAGTCATGAACACCACTTTGCATAGAACTCCCAACTCGGGGAGGCAGTCAATGTTCTACCAAGATTTA
GCATCTCCTGTTACCTCGCGAAAAGGGAAATTTTCAACTCCAGGCCAGGCGGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCACC
AGTTTTTACCTTGGAAGACCGCTCAGATTTCTCTCCTGAGTCTGGCATTCCTGATTATCCTCTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCAATCCAAAGTCACG
ACTTCTCTTCACCGATGAAAAACAAGTCAAATGCCAGCACTTCGTATACACCAACTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGATTTAGTTGGTGGTCAACATCA
AAAGGTGGTGGCAGTGAGCAAGAAGATAAAGGAAAAAGTTCCCCAGTCGAAGGTGTGGTTCAGCCTGGTGCTTTAATCATTCTTCCAACCCCAAGGGAAGTTGCCAGACC
AGAAGTGCAGAGAAATTGCTTCCCTGCTGGAAAACTCAACGAGGAAGAATGGGTTACTGTCTATGGATTCTCCCCTGCTGATACAAATCTAGTTTTGAGGGAATTCGAAA
AATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCCCACAAAGCTCTCAACAAAAATGGCGTT
CAAATTAACGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCGATGCACCGGCAGGCACTCGACGAAAAGATAAATAATCCAGGATTCATGGTTATCCCTCCGGTGCC
TTCTAGAACCACAGAACTCCTTGCAACGAGAGGGCCTGTGCGTACCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCGGGAGGTACCATTGCTTCGCCATCGA
AATCGTTGGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAGAAGGAAATGAAGATTGATGCTTATGATGCTGGAACTTCTTTAGGCCCTTGTTTCTTAGGAACAAAA
AAAAAAAAAAAAAGAGATGGGAATCGGAATCAGACGCAGAAGCAGAAGCAGAAGCAGGTAGTATAATGCCCTCCCCAATTTTGAGAAGCTGCTTCTTGTGGATCACACTC
AACCCAACTAGTCTACATGAGAATTACAAATAGGTTGGAATTCCCATCTTTTTTTTTCATTATTTGTTTTCGGGAACTTTTTATTTTTTACTTTTTAAAATCATGTTGAG
GGAATCTATAAGCATGCATTTATAGTTAGAAATATGCAAATTACCCATCAA

Protein sequence

Show/hide protein sequence

MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSY
TPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDAN
WMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFGV

MC09g0257 (gene) of Bitter gourd (Dali-11) v1 genome