; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0267 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0267
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein THYLAKOID ASSEMBLY 8, chloroplastic
Genome locationMC09:2432873..2433526
RNA-Seq ExpressionMC09g0267
SyntenyMC09g0267
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014066.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.13e-11679.45Show/hide
Query:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
        FLKS+IP P   +A A VV S+PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRA++SDPTKL  VLS+TLSRLLKADLVATLKELLRQ++C LALEVF 
Subjt:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT

Query:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG
        VVRSEYGADLG+YAE+AAALSRNG  EEIDRL+C+LE E   I+CDDKGLIKLI+AVIGGDRRESTVRIYRMM+RSGWGST KADD+TV++LSKGLRRLG
Subjt:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG

Query:  EVELADEINREFQNLVATY
        E+E+ADE+N +FQ+LV ++
Subjt:  EVELADEINREFQNLVATY

XP_022150715.1 uncharacterized protein LOC111018772 [Momordica charantia]1.05e-146100Show/hide
Query:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
        FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
Subjt:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT

Query:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGE
        VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGE
Subjt:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGE

Query:  VELADEINREFQNLVATY
        VELADEINREFQNLVATY
Subjt:  VELADEINREFQNLVATY

XP_022954347.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita moschata]4.13e-11679.45Show/hide
Query:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
        FLKS+IP P   +A A VV S+PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRA++SDPTKL  VLS+TLSRLLKADLVATLKELLRQ++C LALEVF 
Subjt:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT

Query:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG
        VVRSEYGADLG+YAE+AAALSRNG  EEIDRL+C+LE E   I+CDDKGLIKLI+AVIGGDRRESTVRIYRMM+RSGWGST KADD+TV++LSKGLRRLG
Subjt:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG

Query:  EVELADEINREFQNLVATY
        E+E+ADE+N +FQ+LV ++
Subjt:  EVELADEINREFQNLVATY

XP_022992386.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita maxima]9.70e-11579Show/hide
Query:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
        FLKS+IP P   +A A VV S+PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRA++SDPTKL  VLS+TLSRLLKADLVATLKELLRQ++C LALEVF 
Subjt:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT

Query:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG
        VVRSEYG DLG+YAE+AAALSRNG  EEIDRL+C+LE E   I+CDDKGLIKLI+AVIGGDRRESTVRIYRMM+RSGWGST KADD+ V++LSKGLRRLG
Subjt:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG

Query:  EVELADEINREFQNLVATY
        E+E+ADEIN +FQ+LV ++
Subjt:  EVELADEINREFQNLVATY

XP_023522652.1 protein THYLAKOID ASSEMBLY 8, chloroplastic-like [Cucurbita pepo subsp. pepo]7.16e-11779.91Show/hide
Query:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
        FLKS+IP P   +A A VV S+PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRA++SDPTKL  VLS+TLSRLLKADLVATLKELLRQ++C LALEVF 
Subjt:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT

Query:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG
        VVRSEYGADLG+YAE+AAALSRNG AEEIDRL+C+LE E   I+CDDKGLIKLI+AVIGGDRRESTVRIYRMM+RSGWGST KADD+TV++LSKGLRRLG
Subjt:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG

Query:  EVELADEINREFQNLVATY
        E+E+ADE+N +FQ+LV ++
Subjt:  EVELADEINREFQNLVATY

TrEMBL top hitse value%identityAlignment
A0A1S3CGD3 uncharacterized protein LOC1035005978.91e-10676.47Show/hide
Query:  FLKSEIPTP-RSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVF
        FLKS+I  P  ++ A AAV  S  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRA+RSDPTKL  VLS+TLSRLLKADLVATLKELLRQE+C LALEVF
Subjt:  FLKSEIPTP-RSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVF

Query:  TVVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEG-EGEIEC--DDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLR
         V+RSEY A+LGLYAE+AAALSRNG AEEIDRL+C+L+G +G IE   DDKGLIKLI+AVI G+RRESTVRIYRMMRR+GWGS  K DD+ +K++SKGLR
Subjt:  TVVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEG-EGEIEC--DDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLR

Query:  RLGEVELADEINREFQNLVAT
        R+GE+ELADEINREFQ+LV +
Subjt:  RLGEVELADEINREFQNLVAT

A0A5A7V0E2 Uncharacterized protein7.10e-10676.47Show/hide
Query:  FLKSEIPTP-RSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVF
        FLKS+I  P  ++ A AAV  S  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRA+RSDPTKL  VLS+TLSRLLKADLVATLKELLRQE+C LALEVF
Subjt:  FLKSEIPTP-RSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVF

Query:  TVVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEG-EGEIEC--DDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLR
         V+RSEY A+LGLYAE+AAALSRNG AEEIDRL+C+L+G +G IE   DDKGLIKLI+AVI G+RRESTVRIYRMMRR+GWGS  K DD+ +K++SKGLR
Subjt:  TVVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEG-EGEIEC--DDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLR

Query:  RLGEVELADEINREFQNLVAT
        R+GE+ELADEINREFQ+LV +
Subjt:  RLGEVELADEINREFQNLVAT

A0A6J1D998 uncharacterized protein LOC1110187725.08e-147100Show/hide
Query:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
        FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
Subjt:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT

Query:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGE
        VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGE
Subjt:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGE

Query:  VELADEINREFQNLVATY
        VELADEINREFQNLVATY
Subjt:  VELADEINREFQNLVATY

A0A6J1GQS0 protein THYLAKOID ASSEMBLY 8, chloroplastic2.00e-11679.45Show/hide
Query:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
        FLKS+IP P   +A A VV S+PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRA++SDPTKL  VLS+TLSRLLKADLVATLKELLRQ++C LALEVF 
Subjt:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT

Query:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG
        VVRSEYGADLG+YAE+AAALSRNG  EEIDRL+C+LE E   I+CDDKGLIKLI+AVIGGDRRESTVRIYRMM+RSGWGST KADD+TV++LSKGLRRLG
Subjt:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG

Query:  EVELADEINREFQNLVATY
        E+E+ADE+N +FQ+LV ++
Subjt:  EVELADEINREFQNLVATY

A0A6J1JTE8 protein THYLAKOID ASSEMBLY 8, chloroplastic4.70e-11579Show/hide
Query:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT
        FLKS+IP P   +A A VV S+PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRA++SDPTKL  VLS+TLSRLLKADLVATLKELLRQ++C LALEVF 
Subjt:  FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFT

Query:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG
        VVRSEYG DLG+YAE+AAALSRNG  EEIDRL+C+LE E   I+CDDKGLIKLI+AVIGGDRRESTVRIYRMM+RSGWGST KADD+ V++LSKGLRRLG
Subjt:  VVRSEYGADLGLYAELAAALSRNGMAEEIDRLLCELEGEGE-IECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLG

Query:  EVELADEINREFQNLVATY
        E+E+ADEIN +FQ+LV ++
Subjt:  EVELADEINREFQNLVATY

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.3e-0832.85Show/hide
Query:  LSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYAELAAALSRNGMAEEIDRLLCELEG
        +S E + A + LKR Q +   +L   + S +SRLLK+DLV+ L E  RQ Q  L ++++ VVR E  Y  D+  Y ++   L+RN   +E  ++  +L+ 
Subjt:  LSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYAELAAALSRNGMAEEIDRLLCELEG

Query:  EGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRS
        E E+  D      L+R  +  +     +R+Y  MR S
Subjt:  EGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRS

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic8.9e-4755.21Show/hide
Query:  VPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSST---LSRLLKADLVATLKELLRQEQCGLALEVFTVVRSEY-GADLGLYAELA
        V +RCGPRDNRGPL+KGR LSTEAIQ+IQSLKRA R+  +     LS T   L RL+K+DL++ L+ELLRQ+ C LA+ V + +R+EY   DL LYA++ 
Subjt:  VPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSST---LSRLLKADLVATLKELLRQEQCGLALEVFTVVRSEY-GADLGLYAELA

Query:  AALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTT-KADDHTVKILSKGLRRLGEVELADEIN
         AL+RN   +EIDRL+ E++G  +   DDK L KLIRAV+G +RRES VR+Y +MR SGWGS + +AD++  ++LSKGL RLGE +LA +++
Subjt:  AALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTT-KADDHTVKILSKGLRRLGEVELADEIN

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.3e-0827.96Show/hide
Query:  RGPLVKGRTL-STEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYAELAAALSRNGMAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL   + + + RLLK D++A + EL RQE+  LA+++F V++ +  Y  D+ +Y +L  +L+++   +E
Subjt:  RGPLVKGRTL-STEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYAELAAALSRNGMAEE

Query:  IDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGEVELADEINREFQNL
           L  +++ E  +  D +   ++IR  +        + +Y  M +    S    ++   ++L KGL  L    L +++ ++F+ L
Subjt:  IDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGEVELADEINREFQNL

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein8.9e-1032.85Show/hide
Query:  LSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYAELAAALSRNGMAEEIDRLLCELEG
        +S E + A + LKR Q +   +L   + S +SRLLK+DLV+ L E  RQ Q  L ++++ VVR E  Y  D+  Y ++   L+RN   +E  ++  +L+ 
Subjt:  LSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYAELAAALSRNGMAEEIDRLLCELEG

Query:  EGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRS
        E E+  D      L+R  +  +     +R+Y  MR S
Subjt:  EGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRS

AT3G27750.1 FUNCTIONS IN: molecular_function unknown6.3e-4855.21Show/hide
Query:  VPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSST---LSRLLKADLVATLKELLRQEQCGLALEVFTVVRSEY-GADLGLYAELA
        V +RCGPRDNRGPL+KGR LSTEAIQ+IQSLKRA R+  +     LS T   L RL+K+DL++ L+ELLRQ+ C LA+ V + +R+EY   DL LYA++ 
Subjt:  VPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSST---LSRLLKADLVATLKELLRQEQCGLALEVFTVVRSEY-GADLGLYAELA

Query:  AALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTT-KADDHTVKILSKGLRRLGEVELADEIN
         AL+RN   +EIDRL+ E++G  +   DDK L KLIRAV+G +RRES VR+Y +MR SGWGS + +AD++  ++LSKGL RLGE +LA +++
Subjt:  AALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTT-KADDHTVKILSKGLRRLGEVELADEIN

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein8.9e-1027.96Show/hide
Query:  RGPLVKGRTL-STEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYAELAAALSRNGMAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL   + + + RLLK D++A + EL RQE+  LA+++F V++ +  Y  D+ +Y +L  +L+++   +E
Subjt:  RGPLVKGRTL-STEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYAELAAALSRNGMAEE

Query:  IDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGEVELADEINREFQNL
           L  +++ E  +  D +   ++IR  +        + +Y  M +    S    ++   ++L KGL  L    L +++ ++F+ L
Subjt:  IDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGEVELADEINREFQNL

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.5e-1731.12Show/hide
Query:  NRGPLVKGRTLSTEAIQAIQSLKRAQ--------------RSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYA
        NR PL +GR LS EAIQA+Q+LKRA                S    L  V+ S   RLLK D+VA L+ELLRQ +C LAL+VF  +R E  Y   + +Y 
Subjt:  NRGPLVKGRTLSTEAIQAIQSLKRAQ--------------RSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSE--YGADLGLYA

Query:  ELAAALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGEVELADEINRE
        ++   ++ N + EE++ L   ++ E  +  + +    L+  ++     +  +  Y  M+  G+    + D  + ++L  GL   GE+ L+  + ++
Subjt:  ELAAALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGEVELADEINRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCCTCAAATCTGAAATCCCAACTCCGAGGTCCGCCGCCGCCGTCGCCGCCGTAGTCTTCTCCGTTCCGGTGCGGTGCGGGCCACGCGACAACCGAGGACCTCTGGTGAA
AGGCAGAACCCTAAGCACCGAAGCGATCCAAGCCATTCAATCTCTGAAACGGGCCCAAAGATCCGACCCGACGAAGCTCCACCACGTACTCTCCAGCACGCTCTCCCGAT
TGCTCAAAGCGGACCTCGTCGCGACCTTGAAGGAGCTTCTCCGGCAGGAGCAGTGCGGCCTCGCGTTGGAGGTTTTCACCGTCGTCCGATCGGAGTACGGCGCCGACTTA
GGGCTGTACGCGGAGCTGGCGGCGGCGCTGTCGAGGAACGGGATGGCGGAGGAAATCGACCGGCTGTTGTGCGAATTGGAGGGAGAGGGGGAGATCGAGTGCGACGATAA
GGGTTTGATTAAGCTGATCAGGGCGGTGATTGGTGGGGACAGAAGGGAATCGACGGTCAGGATTTATCGGATGATGAGGAGGAGCGGGTGGGGGTCCACCACCAAGGCCG
ATGATCACACGGTTAAGATTTTGAGCAAGGGTTTAAGGAGGCTTGGGGAAGTGGAGTTAGCTGATGAGATTAATAGGGAATTCCAAAATTTAGTGGCCACTTAT
mRNA sequenceShow/hide mRNA sequence
TTCCTCAAATCTGAAATCCCAACTCCGAGGTCCGCCGCCGCCGTCGCCGCCGTAGTCTTCTCCGTTCCGGTGCGGTGCGGGCCACGCGACAACCGAGGACCTCTGGTGAA
AGGCAGAACCCTAAGCACCGAAGCGATCCAAGCCATTCAATCTCTGAAACGGGCCCAAAGATCCGACCCGACGAAGCTCCACCACGTACTCTCCAGCACGCTCTCCCGAT
TGCTCAAAGCGGACCTCGTCGCGACCTTGAAGGAGCTTCTCCGGCAGGAGCAGTGCGGCCTCGCGTTGGAGGTTTTCACCGTCGTCCGATCGGAGTACGGCGCCGACTTA
GGGCTGTACGCGGAGCTGGCGGCGGCGCTGTCGAGGAACGGGATGGCGGAGGAAATCGACCGGCTGTTGTGCGAATTGGAGGGAGAGGGGGAGATCGAGTGCGACGATAA
GGGTTTGATTAAGCTGATCAGGGCGGTGATTGGTGGGGACAGAAGGGAATCGACGGTCAGGATTTATCGGATGATGAGGAGGAGCGGGTGGGGGTCCACCACCAAGGCCG
ATGATCACACGGTTAAGATTTTGAGCAAGGGTTTAAGGAGGCTTGGGGAAGTGGAGTTAGCTGATGAGATTAATAGGGAATTCCAAAATTTAGTGGCCACTTAT
Protein sequenceShow/hide protein sequence
FLKSEIPTPRSAAAVAAVVFSVPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAQRSDPTKLHHVLSSTLSRLLKADLVATLKELLRQEQCGLALEVFTVVRSEYGADL
GLYAELAAALSRNGMAEEIDRLLCELEGEGEIECDDKGLIKLIRAVIGGDRRESTVRIYRMMRRSGWGSTTKADDHTVKILSKGLRRLGEVELADEINREFQNLVATY