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MC09g0277 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0277
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
Genome locationMC09:2514291..2514521
RNA-Seq ExpressionMC09g0277
SyntenyMC09g0277
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0043229 - intracellular organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ19381.1 ribosomal protein S17 [Actinidia rufa]1.10e-0463.64Show/hide
Query:  NGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVL
        NG + LGLANG+T L+LD V+DLELV+ +V L LLL SD  LVL
Subjt:  NGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVL

KAF4372487.1 hypothetical protein F8388_027160 [Cannabis sativa]1.81e-0446.97Show/hide
Query:  LQWNPELPRRGFPCFGLGISRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAAL
        LQWNP+L    F  F  GI   N N  + LGLANG+  L+L++V +LELV  ++ L LLL  D +L
Subjt:  LQWNPELPRRGFPCFGLGISRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAAL

RXH69120.1 hypothetical protein DVH24_031453 [Malus domestica]1.02e-1058.67Show/hide
Query:  LLRLQWNPELPRR-GFPCFGLGISRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR
        L RLQ NPEL RR  F    L    RNR+ +K LGLANG+ F KLD+V +LELVIR+V LVLLL  D  LVL +R
Subjt:  LLRLQWNPELPRR-GFPCFGLGISRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR

RXH88612.1 hypothetical protein DVH24_000211 [Malus domestica]5.15e-0557.69Show/hide
Query:  SRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR
        S ++R+ +K LGLANG+ F KLD+V +LELVIR+V LVL L  D  LVL +R
Subjt:  SRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR

TQD71245.1 hypothetical protein C1H46_043221 [Malus baccata]7.86e-0661.54Show/hide
Query:  SRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR
        S  NR+ +K LGLANG+ F KLD+V +LELVIR+V LVLLL  D  LVL +R
Subjt:  SRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR

TrEMBL top hitse value%identityAlignment
A0A498HEB3 Uncharacterized protein4.96e-1158.67Show/hide
Query:  LLRLQWNPELPRR-GFPCFGLGISRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR
        L RLQ NPEL RR  F    L    RNR+ +K LGLANG+ F KLD+V +LELVIR+V LVLLL  D  LVL +R
Subjt:  LLRLQWNPELPRR-GFPCFGLGISRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR

A0A498J3X1 Uncharacterized protein2.49e-0557.69Show/hide
Query:  SRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR
        S ++R+ +K LGLANG+ F KLD+V +LELVIR+V LVL L  D  LVL +R
Subjt:  SRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR

A0A540KAJ8 Uncharacterized protein3.81e-0661.54Show/hide
Query:  SRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR
        S  NR+ +K LGLANG+ F KLD+V +LELVIR+V LVLLL  D  LVL +R
Subjt:  SRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMR

A0A7J0H8T8 Ribosomal protein S175.35e-0563.64Show/hide
Query:  NGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVL
        NG + LGLANG+T L+LD V+DLELV+ +V L LLL SD  LVL
Subjt:  NGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVL

A0A7J6HWF1 Uncharacterized protein8.77e-0546.97Show/hide
Query:  LQWNPELPRRGFPCFGLGISRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAAL
        LQWNP+L    F  F  GI   N N  + LGLANG+  L+L++V +LELV  ++ L LLL  D +L
Subjt:  LQWNPELPRRGFPCFGLGISRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGTTGCTGCTCAGACTCCAATGGAATCCCGAGCTCCCCAGGCGCGGCTTCCCCTGCTTTGGGCTTGGAATTTCTCGGCGGAACCGGAATGGCCAGAAACGTCTTGGTCT
TGCTAATGGGGCGACATTTCTCAAGCTCGACGACGTCTCCGACCTTGAACTGGTTATCCGGATCGTGCGCCTGGTACTTCTTCTTGATTCTGATGCGGCGCTTGTACTTT
GGATGAGGCGC
mRNA sequenceShow/hide mRNA sequence
CTGTTGCTGCTCAGACTCCAATGGAATCCCGAGCTCCCCAGGCGCGGCTTCCCCTGCTTTGGGCTTGGAATTTCTCGGCGGAACCGGAATGGCCAGAAACGTCTTGGTCT
TGCTAATGGGGCGACATTTCTCAAGCTCGACGACGTCTCCGACCTTGAACTGGTTATCCGGATCGTGCGCCTGGTACTTCTTCTTGATTCTGATGCGGCGCTTGTACTTT
GGATGAGGCGC
Protein sequenceShow/hide protein sequence
LLLLRLQWNPELPRRGFPCFGLGISRRNRNGQKRLGLANGATFLKLDDVSDLELVIRIVRLVLLLDSDAALVLWMRR