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MC09g0280 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0280
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDynein light chain
Genome locationMC09:2527265..2527755
RNA-Seq ExpressionMC09g0280
SyntenyMC09g0280
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462164.1 PREDICTED: dynein light chain LC6, flagellar outer arm-like [Cucumis melo]2.44e-6194.79Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
        MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP

XP_011659570.1 dynein light chain LC6, flagellar outer arm [Cucumis sativus]9.95e-6193.75Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
        MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS P
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP

XP_022964212.1 dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]2.65e-5691.49Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQ+QAM AA KALDLYDVFDCKSIA HIKKDFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

XP_023513963.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita pepo subsp. pepo]2.65e-5691.49Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQ+QAM AA KALDLYDVFDCKSIA HIKKDFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

XP_038897874.1 dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]1.21e-6194.79Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
        MLEGKAL+QDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP

TrEMBL top hitse value%identityAlignment
A0A0A0K947 Dynein light chain4.82e-6193.75Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
        MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS P
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP

A0A1S3CGU5 Dynein light chain1.18e-6194.79Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
        MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP

A0A5A7UW48 Dynein light chain1.18e-6194.79Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
        MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP

A0A6J1HH84 Dynein light chain1.28e-5691.49Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQ+QAM AA KALDLYDVFDCKSIA HIKKDFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

A0A6J1KDK4 Dynein light chain1.28e-5691.49Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQ+QAM AA KALDLYDVFDCKSIA HIKKDFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS

SwissProt top hitse value%identityAlignment
P61273 Dynein light chain 1, cytoplasmic4.4e-1442.7Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

P61285 Dynein light chain 1, cytoplasmic4.4e-1442.7Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

P63167 Dynein light chain 1, cytoplasmic4.4e-1442.7Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

P63168 Dynein light chain 1, cytoplasmic4.4e-1442.7Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

P63169 Dynein light chain 1, cytoplasmic4.4e-1442.7Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+VG NFG + TH    FIYF L  +  L+FK
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 112.4e-2381.36Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCV
        MLEGKA+V+D+DMP KMQ+QAMA A +ALDL+DVFDCKSIAGHIKK+FD RYGSGWQCV
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 113.3e-4181.72Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS
        MLEGKA+V+D+DMP KMQ+QAMA A +ALDL+DVFDCKSIAGHIKK+FD RYGSGWQCVVGSNFGCFFTHSKG+FIYF+LETL FLIFKG ++
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS

AT3G16120.1 Dynein light chain type 1 family protein8.4e-3777.17Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVT
        MLEGKA V++TDMP KMQ+QAM  A ++LDL+DVFD  SIA HIKK+FD RYGSGWQCVVG+NFGCFFTHSKG+FIYF L TLNFLIFKG T
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVT

AT4G27360.1 Dynein light chain type 1 family protein1.2e-2254.44Show/hide
Query:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG
        MLEGKA++ DTDM   M+  A++ A KALD +DV +   IA  IKK+FD  YGSGWQC+VG++FG F TH  G FI+F + +L  L+FKG
Subjt:  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKG

AT5G20110.1 Dynein light chain type 1 family protein7.4e-1750Show/hide
Query:  DMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK
        DMPG MQ  A   A   LD  + F  K +A ++KK+FD  YG  W C+VGS+FG F THS G FIYF ++ L  L+FK
Subjt:  DMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGCAAAGCTTTGGTACAGGACACAGACATGCCTGGCAAGATGCAGGTCCAAGCCATGGCCGCCGCTTATAAAGCTCTGGATCTCTATGATGTTTTCGACTG
CAAATCCATTGCTGGCCACATAAAAAAGGATTTTGACAACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTTACCCACTCCAAAGGGT
CTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGGTGACTTCTTCGGCCCCA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAGGCAAAGCTTTGGTACAGGACACAGACATGCCTGGCAAGATGCAGGTCCAAGCCATGGCCGCCGCTTATAAAGCTCTGGATCTCTATGATGTTTTCGACTG
CAAATCCATTGCTGGCCACATAAAAAAGGATTTTGACAACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTTACCCACTCCAAAGGGT
CTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGGTGACTTCTTCGGCCCCA
Protein sequenceShow/hide protein sequence
MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP