CuGenDBv2

Gene ID	MC09g0334
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	WD repeat-containing protein 43
Genome location	MC09:2988200..2991623
RNA-Seq Expression	MC09g0334
Synteny	MC09g0334
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0005730 - nucleolus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR007148 - Small-subunit processome, Utp12 IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily IPR015943 - WD40/YVTN repeat-like-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136081.1 WD repeat-containing protein 43 isoform X2 [Cucumis sativus]

0.0

81.05

Show/hide

Query:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        MK E+LKS PI AFTPDGDYLAI+S N T+K  S    RDGSLLAEWKD +GK D GYSC+ACCF+ KK  +K S CV+AIGT++GDVLAVNAS+GE KW
Subjt:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
        VSAGCH GGVIGLSFANKG RLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFS DE+YL VAGKKL+ILSTD+GDEL+VH DKLGPVKLVS+SDD
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
        AK IITSE GAKHLQVWWC++SA K SRGP+LSMKHPPFVSEC+N+SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV+P KV+VKAND QSAEENHGSAK
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK

Query:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
        KNR SV+ASRI G GDNEVSVLVTHGS+D PQ +L +IGY+VKED NTAHE KTLQQND  S QGPHEIEQ +T PKSKKSKKKRAAS++DSLTAGDVS 
Subjt:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG

Query:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
        VGNGD SDVLFNDD+NEP+MGEKLASLNL DQ++D   EQE+PSVP IPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL LLH
Subjt:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH

Query:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG
        +LIS IQSRGAILVCALPWLR L+LQHAS+IMSQESSLLALNSLYQLIESR STFQSA+LLSSSLDFLYT VLD+E +DND IVPIIYE+ED SD+ E+G
Subjt:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG

Query:  DEMETDEDEEEEEREEAFGDLSAGEVDD
        DEMET+ED+E +E E AF DLSAGEVDD
Subjt:  DEMETDEDEEEEEREEAFGDLSAGEVDD

XP_008461080.1 PREDICTED: WD repeat-containing protein 43 [Cucumis melo]

0.0

82.48

Show/hide

Query:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        MKKE+LKSPPITAFTPDGDYLAI S N T+K  S    RDGSLLAEWKD +GK D GYSC+ACC + KK  +K S C++AIGT+NGDVLAVNAS+GE KW
Subjt:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
        VS GCH GGVIGLSFAN+GRRL TVGSNGMASEMDTETGNIIKEFKASKKSISSSAFS DEKYLAVAGKKL+ILS D+GDEL+VH DKL PVKLVSISDD
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
        AK I+TSE GAKHLQVWWCDMSA K SRGPVLSM HPPFVSEC+N+SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV P KV+VKAND QSAEENHGSAK
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK

Query:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
        KNR+SV+AS+I   GDNEVSVLVTHGS+D PQ SL +IGY+VKED NTAHE KTLQQND  S QGPHEIEQ +T PKSKKSKKKRAASD+DS TAGDVS 
Subjt:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG

Query:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
        VGNGDASDV+FNDD+NEP+MGEKLASLNL DQ+ED   EQE+PSVP IPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
Subjt:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH

Query:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG
        S+IS IQSRGAILVCALPWLRGLLLQHAS+IMSQESSLLALNSLYQLIE+RISTFQSA+LLSSSLDFLYTGVLDEE +DNDAIVPIIYE+ED SD+ E+G
Subjt:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG

Query:  DEMETDEDEEEEEREEAFGDLSAGEVDD
        DEMETDED+E +E E AF DLSAGEVDD
Subjt:  DEMETDEDEEEEEREEAFGDLSAGEVDD

XP_022150139.1 WD repeat-containing protein 43 [Momordica charantia]

0.0

99.21

Show/hide

Query:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        MKKEMLKSPPITAFTPDGDYLAILSPNETVK  S   ARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
Subjt:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
        VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
        AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK

Query:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
        KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
Subjt:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG

Query:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
        VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
Subjt:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH

Query:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG
        SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG
Subjt:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG

Query:  DEMETDEDEEEEEREEAFGDLSAGEVDDISE
        DEMETDEDEEEEEREEAFGDLSAGEVDDISE
Subjt:  DEMETDEDEEEEEREEAFGDLSAGEVDDISE

XP_031744699.1 WD repeat-containing protein 43 isoform X1 [Cucumis sativus]

0.0

80.03

Show/hide

Query:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        MK E+LKS PI AFTPDGDYLAI+S N T+K  S    RDGSLLAEWKD +GK D GYSC+ACCF+ KK  +K S CV+AIGT++GDVLAVNAS+GE KW
Subjt:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
        VSAGCH GGVIGLSFANKG RLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFS DE+YL VAGKKL+ILSTD+GDEL+VH DKLGPVKLVS+SDD
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
        AK IITSE GAKHLQVWWC++SA K SRGP+LSMKHPPFVSEC+N+SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV+P KV+VKAND QSAEENHGSAK
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK

Query:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVS-
        KNR SV+ASRI G GDNEVSVLVTHGS+D PQ +L +IGY+VKED NTAHE KTLQQND  S QGPHEIEQ +T PKSKKSKKKRAAS++DSLTAGDVS 
Subjt:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVS-

Query:  -------GVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNS
                VGNGD SDVLFNDD+NEP+MGEKLASLNL DQ++D   EQE+PSVP IPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNS
Subjt:  -------GVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNS

Query:  SDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDED
        SDVL LLH+LIS IQSRGAILVCALPWLR L+LQHAS+IMSQESSLLALNSLYQLIESR STFQSA+LLSSSLDFLYT VLD+E +DND IVPIIYE+ED
Subjt:  SDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDED

Query:  DSDDQESGDEMETDEDEEEEEREEAFGDLSAGEVDD
         SD+ E+GDEMET+ED+E +E E AF DLSAGEVDD
Subjt:  DSDDQESGDEMETDEDEEEEEREEAFGDLSAGEVDD

XP_038899613.1 WD repeat-containing protein 43 [Benincasa hispida]

0.0

84.71

Show/hide

Query:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        MKKE+LKSPPITAFTPDGDYLAILS N T+K  S    RDGSLLAEWKD +GK DVGYSC+ACCF  KK  +K S CV+A+GT++GDVLAVNAS+GE KW
Subjt:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
        VSAGCH+GGVIGLSFANKGRRL  VGSNG  SEMDTETGNIIKEFKASKKSISSS+FS DEKYLAVAGKKL+ILS D+GDELMVH DKLGPVKLVS+SDD
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
        AK IITSE GAKHLQVWWCDMSA KLSRGPVLSMKHPPFVSEC+N+SN+ED++VVLSVSVSGVAY+W+LKILSEDEVSP KV+VKAND QSAEENHGSAK
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK

Query:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
        KNR+SVIASRI+G GDNEVSVLVTHGSMD PQ SLF+IGYSVKED+NTA   KTLQQNDD S QGPHE+EQ V TPKSKK KKKRAASD+DSLT GD+S 
Subjt:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG

Query:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
        VGNGDASDV+FNDD+NEP+MGEKLASLNL+DQ+EDE  E+E PSVPAIPPSADSVQVLLKQALHA+DR LLLECLYTKDDKVISKSIAQLNSSDVLKLLH
Subjt:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH

Query:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG
        SLIS IQSRGAILVC LPWLRGLLLQHAS+IMSQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFLY+GVLDEEVD+NDAIVPIIYE EDDSDD+ESG
Subjt:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG

Query:  DEMETDEDEEEEEREEAFGDLSAGEVDD
        DEMETDEDEE +E E AF DLSAGEVDD
Subjt:  DEMETDEDEEEEEREEAFGDLSAGEVDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBW9 Utp12 domain-containing protein

0.0

81.05

Show/hide

Query:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        MK E+LKS PI AFTPDGDYLAI+S N T+K  S    RDGSLLAEWKD +GK D GYSC+ACCF+ KK  +K S CV+AIGT++GDVLAVNAS+GE KW
Subjt:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
        VSAGCH GGVIGLSFANKG RLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFS DE+YL VAGKKL+ILSTD+GDEL+VH DKLGPVKLVS+SDD
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
        AK IITSE GAKHLQVWWC++SA K SRGP+LSMKHPPFVSEC+N+SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV+P KV+VKAND QSAEENHGSAK
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK

Query:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
        KNR SV+ASRI G GDNEVSVLVTHGS+D PQ +L +IGY+VKED NTAHE KTLQQND  S QGPHEIEQ +T PKSKKSKKKRAAS++DSLTAGDVS 
Subjt:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG

Query:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
        VGNGD SDVLFNDD+NEP+MGEKLASLNL DQ++D   EQE+PSVP IPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL LLH
Subjt:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH

Query:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG
        +LIS IQSRGAILVCALPWLR L+LQHAS+IMSQESSLLALNSLYQLIESR STFQSA+LLSSSLDFLYT VLD+E +DND IVPIIYE+ED SD+ E+G
Subjt:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG

Query:  DEMETDEDEEEEEREEAFGDLSAGEVDD
        DEMET+ED+E +E E AF DLSAGEVDD
Subjt:  DEMETDEDEEEEEREEAFGDLSAGEVDD

A0A1S3CDX9 WD repeat-containing protein 43

0.0

82.48

Show/hide

Query:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        MKKE+LKSPPITAFTPDGDYLAI S N T+K  S    RDGSLLAEWKD +GK D GYSC+ACC + KK  +K S C++AIGT+NGDVLAVNAS+GE KW
Subjt:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
        VS GCH GGVIGLSFAN+GRRL TVGSNGMASEMDTETGNIIKEFKASKKSISSSAFS DEKYLAVAGKKL+ILS D+GDEL+VH DKL PVKLVSISDD
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
        AK I+TSE GAKHLQVWWCDMSA K SRGPVLSM HPPFVSEC+N+SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV P KV+VKAND QSAEENHGSAK
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK

Query:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
        KNR+SV+AS+I   GDNEVSVLVTHGS+D PQ SL +IGY+VKED NTAHE KTLQQND  S QGPHEIEQ +T PKSKKSKKKRAASD+DS TAGDVS 
Subjt:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG

Query:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
        VGNGDASDV+FNDD+NEP+MGEKLASLNL DQ+ED   EQE+PSVP IPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
Subjt:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH

Query:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG
        S+IS IQSRGAILVCALPWLRGLLLQHAS+IMSQESSLLALNSLYQLIE+RISTFQSA+LLSSSLDFLYTGVLDEE +DNDAIVPIIYE+ED SD+ E+G
Subjt:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG

Query:  DEMETDEDEEEEEREEAFGDLSAGEVDD
        DEMETDED+E +E E AF DLSAGEVDD
Subjt:  DEMETDEDEEEEEREEAFGDLSAGEVDD

A0A5A7UYX1 WD repeat-containing protein 43

0.0

83.56

Show/hide

Query:  RDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTET
        RDGSLLAEWKD +GK D GYSC+ACC + KK  +K S CV+AIGT+NGDVLAVNAS+GE KWVS GCH GGVIGLSFAN+GRRL TVGSNGMASEMDTET
Subjt:  RDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTET

Query:  GNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPP
        GNIIKEFKASKKSISSSAFS DEKYLAVAGKKL+ILS D+GDEL+VH DKL PVKLVSISDDAK IITSE GAKHLQVWWCDMSA K SRGPVLSM HPP
Subjt:  GNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPP

Query:  FVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNI
        FVSEC+N+SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV P KV+VKAND QSAEENHGSAKKNR+SV+ASRI   GDNEVSVLVTHGS+D PQ SL +I
Subjt:  FVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNI

Query:  GYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESH
        GY+VKED NTAHE KTLQQND  S QGPHEIEQ +  PKSKKSKKKRAASD+DS TAGDVS VGNGDASDV+FNDD+NEP+MGEKLASLNL DQ+ED   
Subjt:  GYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESH

Query:  EQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSL
        EQE+PSVP IPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+IS IQSRGAILVCALPWLRGLLLQHAS+IMSQESSL
Subjt:  EQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSL

Query:  LALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMETDEDEEEEEREEAFGDLSAGEVDD
        LALNSLYQLIE+RISTFQSA+LLSSSLDFLYTGVLDEE +DNDAIVPIIYE+ED SD+ E+GDEMETDED+E +E E AF DLSAGEVDD
Subjt:  LALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMETDEDEEEEEREEAFGDLSAGEVDD

A0A6J1D938 WD repeat-containing protein 43

0.0

99.21

Show/hide

Query:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        MKKEMLKSPPITAFTPDGDYLAILSPNETVK  S   ARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
Subjt:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
        VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
        AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK

Query:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
        KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
Subjt:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG

Query:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
        VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
Subjt:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH

Query:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG
        SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG
Subjt:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESG

Query:  DEMETDEDEEEEEREEAFGDLSAGEVDDISE
        DEMETDEDEEEEEREEAFGDLSAGEVDDISE
Subjt:  DEMETDEDEEEEEREEAFGDLSAGEVDDISE

A0A6J1HJF3 WD repeat-containing protein 43 isoform X1

0.0

80.76

Show/hide

Query:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        MK E  KSPPITAFTP+GDYLAILS N TVK  + +   DGSLLAEWKD +GKTD GYSC+ACCFV KK  +K SSC+IAIGT+ GDVL VNASSGETKW
Subjt:  MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
        VSAGCH+GGVIGLSFA+KGRRL TVGSNG+A +M+ ETG+II EFKASKKSISSSAFS DEKYLAVAGKKL+ILSTD+G ELMVH DKLGPVKL SISDD
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK
        AK IITSE GAKH+QVWWCDMSA KLSRGPVLSMKHPPFVSEC+NI+N EDSIVVLSVSVSGVAY+W+LK LSED+V+P KVTVK N+ +SAEENHGSAK
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAK

Query:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG
        KNRISV++S I G GDNEVSVLVTHGSMD PQ ++ NIGY  KED N A EK+           GPHEI+QAVT+PKSKKSKKKRAASD+DS  AGDVS 
Subjt:  KNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG

Query:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
        VGN D S+VLFNDD+NEPTMG+KLASLNL +Q+EDE+HEQ+EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH
Subjt:  VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH

Query:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQES-
        +LISIIQSRGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFLYTGVLDEE ++NDAIVPIIYE EDDSDD+ES 
Subjt:  SLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQES-

Query:  GDEMETDEDEEEEEREEAFGDLSAGEVDD
        GDEMETDE+    E E AF DLSAGEVDD
Subjt:  GDEMETDEDEEEEEREEAFGDLSAGEVDD

SwissProt top hits

e value

%identity

Alignment

Q15061 WD repeat-containing protein 43

2.5e-09

23.31

Show/hide

Query:  FTLARDGSLLAEWKDSEGKTDVGY----------SCLACCFVR------KKHQKKKSSCV--------IAIGTDNGDVLAVNASSGE--TKWVSAGCHIG
        F LA     L  W+ +  +    Y          +CLA    R       + +K+KS  V        +A+GT  G +L  +   GE  +K +S G H  
Subjt:  FTLARDGSLLAEWKDSEGKTDVGY----------SCLACCFVR------KKHQKKKSSCV--------IAIGTDNGDVLAVNASSGE--TKWVSAGCHIG

Query:  GVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGK--KLRILSTD------NGDELMVHSDKLGPVKLVSISDD
         V  + +      L +   +    E + +T  +  ++K    S+SS   SPD K L  AG+  KL +L T        G    V S     ++  + S  
Subjt:  GVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGK--KLRILSTD------NGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEF--GAKH---LQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEEN
           I    F  GA H   L VW      ++ S     ++   P   +     N+E+ + +  V   G  +++   IL+     P       ++       
Subjt:  AKAIITSEF--GAKH---LQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEEN

Query:  HGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKS--KKSKKKRAASDIDSL
         G  KK+    I     G   +++S+L+ +GS  QP +         +  LN+      L +  D S     ++E A+T  ++    S+ K     I   
Subjt:  HGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKS--KKSKKKRAASDIDSL

Query:  TAGDVSGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSS
         A         +  +       NE ++ E+L ++++      ++H++ +  +       +S  VLL Q L ++D  +L + L T++  +I K++ ++   
Subjt:  TAGDVSGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSS

Query:  DVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVP-----IIY
         ++ LL  L   +Q      V  + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E     A  P     ++Y
Subjt:  DVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVP-----IIY

Query:  EDE-------DDSDDQESGDEMETDEDEEEEEREE
        E+E       D+  D++S D  + DE+E E E++E
Subjt:  EDE-------DDSDDQESGDEMETDEDEEEEEREE

Q6ZQL4 WD repeat-containing protein 43

9.0e-07

21.9

Show/hide

Query:  FTLARDGSLLAEWKDSEGKTDVGY----------SCLACCFVR----KKHQKKK----------SSCVIAIGTDNGDVLAVNASSGET-KWVSAGCHIGG
        F LA     L  W+ +  +    Y          +CLA    R    + HQ+KK           + ++A+GT  G +L  +   GE    +++G H   
Subjt:  FTLARDGSLLAEWKDSEGKTDVGY----------SCLACCFVR----KKHQKKK----------SSCVIAIGTDNGDVLAVNASSGET-KWVSAGCHIGG

Query:  VIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGD---ELMVHSDKLGPVKLVSI----SDDAK
        V  + +      L +   +    E  T+T  +  ++K    S+SS   SPD K L  AG+ +++   +  +       H+  +  ++  +I    S  + 
Subjt:  VIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGD---ELMVHSDKLGPVKLVSI----SDDAK

Query:  AIITSEF--GAKH---LQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHG
         I    F  GA H   L VW      ++ S     ++   P   +     N+E+ + +  V   G  +++   IL+     P         A   +    
Subjt:  AIITSEF--GAKH---LQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHG

Query:  SAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKS--KKSKKKRAASDIDSLTA
        + K   I   +  +D     ++S+L+ +G+  QP +         +  LN+      L++  D S      +E A+T  K+    S+ K     I    A
Subjt:  SAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKS--KKSKKKRAASDIDSLTA

Query:  GDVSGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDV
                   ++        E T+ E+L +++L     D    +++          +S  VLL Q L ++D  +L + L TK+  +I +++ ++    V
Subjt:  GDVSGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDV

Query:  LKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTG-------------------VLDEE
        + LL  L   +Q         + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T                    V +EE
Subjt:  LKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTG-------------------VLDEE

Query:  VDDNDAIVPIIYEDEDDSDDQESGDEMETDE--DEEEEEREEAFGDLSAGEVD
          + ++   +  +D DD+ D++   + E DE  DE+ EE +E   D    E D
Subjt:  VDDNDAIVPIIYEDEDDSDDQESGDEMETDE--DEEEEEREEAFGDLSAGEVD

Arabidopsis top hits

e value

%identity

Alignment

AT1G15420.1 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).

2.7e-51

52.51

Show/hide

Query:  KSKKSKKKRAASDIDSLTAGDVSGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPA--IPPSADSVQVLLKQALHADDRALLLEC
        K KK  KKRA  + D  +  D SG+ + D   VL +D +NEPT+G+KL SL+LL+ ++  S E    S P    PP+A SV VLL+QALHADDR+LLL+C
Subjt:  KSKKSKKKRAASDIDSLTAGDVSGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPA--IPPSADSVQVLLKQALHADDRALLLEC

Query:  LYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLD
        LY +D++VI+ S+A+LNS++VLKLL++L+ I+QSRGAIL C +PW++ LLL H+S IMSQESSLLALN++YQLIESR+ST  +AV +SS LD L    LD
Subjt:  LYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLD

Query:  EEVDDNDAIVPIIYEDEDDSDDQESGDE--METDEDEEEEEREEAFGDLSAGEVDDISE
        EE D+     P+IYED+D  +D+E G E  METDE+ ++   E A G       DD+S+
Subjt:  EEVDDNDAIVPIIYEDEDDSDDQESGDE--METDEDEEEEEREEAFGDLSAGEVDDISE

AT5G11240.1 transducin family protein / WD-40 repeat family protein

6.1e-35

25.59

Show/hide

Query:  ITAFTPDGDYLAILSPN------ETVKASSFTLARDGSLLAE----WKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW
        +T+F+P  DYLA+ + +      +TVK    T   D +   E     K  +G   V Y+C+    + KK ++K  + V+ +GT  GDVLA++ +SG+ KW
Subjt:  ITAFTPDGDYLAILSPN------ETVKASSFTLARDGSLLAE----WKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKW

Query:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD
          + CH GGV  +S + K   + + G++GM  ++D  +GN+I++FKAS K++SS   SPD K L  A  +L+  +  +  ++   +   G V+ V+ ++D
Subjt:  VSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDD

Query:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSE-DEVSPNKVTVKANDAQSAEENHGSA
         K +++S  G +++ VW  D  A+K S   VL+++HPP   +    +NE+  + VL++S  GV Y W    + E    +P KV +      +A+ +    
Subjt:  AKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSE-DEVSPNKVTVKANDAQSAEENHGSA

Query:  KKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQ-QNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDV
        K +   + A+++ G        ++  GS      +    G  VK     + +K  LQ  ND         I   +T   SK SK++   + + +L     
Subjt:  KKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQ-QNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDV

Query:  SGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDE---DESHEQEEPSVPAIPPSADSVQVLLKQALHAD-DRALLLECLYTK---DDKVISKSIAQLN
               A D L           +K   L+  D+D    D+SH     +  ++     S+ +L     H +   A +++    K     K +  ++  + 
Subjt:  SGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDE---DESHEQEEPSVPAIPPSADSVQVLLKQALHAD-DRALLLECLYTK---DDKVISKSIAQLN

Query:  SSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQE-SSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGV----------------LD
         S   K L +L ++ Q+R       LPW+  +++ H+  IMSQE  +   LN+L ++ +SR +  Q  + LS  L  +   +                +D
Subjt:  SSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQE-SSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGV----------------LD

Query:  EEVDDNDAIVPIIYEDEDDSDDQESGDEMETDE
        E  D+ + +    Y + D+  D  S D  + D+
Subjt:  EEVDDNDAIVPIIYEDEDDSDDQESGDEMETDE

Sequences

Show/hide sequences

CDS sequence

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ATGAAGAAGGAAATGCTGAAATCGCCGCCCATCACAGCTTTCACACCCGACGGCGACTATCTGGCTATCTTGTCCCCCAACGAAACTGTCAAGGCAAGCTCCTTCACTCT
TGCTCGTGATGGAAGTTTACTGGCAGAGTGGAAGGATTCTGAGGGAAAAACCGATGTGGGTTATTCCTGTTTGGCCTGCTGTTTTGTGCGGAAAAAGCATCAAAAGAAAA
AGAGTTCTTGTGTAATTGCTATCGGTACCGATAATGGGGATGTGTTGGCTGTAAATGCTTCAAGTGGTGAGACGAAGTGGGTATCTGCAGGTTGCCATATTGGTGGAGTT
ATTGGCCTTTCTTTTGCGAACAAAGGCCGTAGACTGCGGACGGTTGGAAGTAATGGAATGGCATCTGAGATGGACACTGAAACAGGAAACATTATCAAGGAGTTCAAAGC
TTCGAAAAAATCAATCTCTTCTTCAGCCTTTTCACCTGATGAGAAGTACTTAGCTGTTGCTGGCAAAAAGTTGAGGATTTTAAGCACAGATAACGGGGATGAGCTTATGG
TGCACTCTGATAAATTGGGTCCTGTGAAGCTTGTTTCTATATCTGATGATGCCAAAGCAATAATTACATCAGAATTTGGAGCCAAACATCTTCAAGTGTGGTGGTGTGAC
ATGAGTGCAAGAAAACTTAGTAGAGGTCCTGTTCTTTCCATGAAACATCCTCCATTTGTTTCTGAGTGCAAAAATATTAGCAATGAAGAAGATAGCATAGTTGTCTTGTC
AGTATCAGTATCGGGTGTAGCTTATGTATGGAGATTAAAGATTCTATCAGAAGACGAGGTTAGTCCAAATAAAGTCACTGTTAAAGCTAATGACGCCCAATCAGCTGAGG
AAAACCATGGAAGTGCTAAGAAGAATCGAATTTCTGTCATCGCTTCCAGAATAGATGGTTCAGGAGACAATGAAGTGTCAGTTCTTGTTACTCATGGCTCCATGGACCAA
CCGCAGCTTAGTCTTTTTAATATTGGTTATTCCGTGAAGGAAGACCTAAATACTGCGCATGAGAAGAAAACCCTCCAACAAAATGATGATTTTTCTGGACAAGGTCCCCA
TGAGATCGAACAAGCAGTTACTACGCCTAAAAGTAAGAAAAGCAAAAAGAAAAGAGCAGCATCTGATATTGATAGTCTGACAGCTGGAGATGTCAGCGGTGTTGGCAATG
GAGACGCATCTGATGTTTTATTCAATGATGATATAAATGAGCCAACCATGGGAGAGAAACTTGCAAGTTTGAATCTGCTAGACCAGGACGAAGATGAGAGCCATGAACAA
GAAGAACCTTCCGTCCCTGCAATACCACCAAGTGCAGACTCTGTTCAGGTTTTGCTCAAGCAAGCACTACATGCTGACGATCGCGCCCTTTTGCTAGAATGCTTATATAC
CAAGGATGATAAGGTTATCTCAAAATCAATAGCACAATTGAATTCATCTGATGTTCTTAAGCTTTTGCACTCTCTGATATCCATTATCCAGTCGAGAGGGGCAATTCTTG
TATGTGCCCTCCCTTGGCTGAGAGGTTTACTTCTCCAACATGCAAGTAGAATAATGTCCCAAGAATCTTCTCTGCTCGCCCTGAATTCTCTATATCAGCTCATTGAGTCT
AGAATTTCAACTTTCCAATCCGCTGTTCTGCTATCAAGTAGCTTGGACTTCCTTTACACGGGGGTTCTTGATGAGGAGGTGGATGACAATGATGCCATTGTGCCGATTAT
TTACGAGGACGAGGACGACAGCGATGATCAGGAATCGGGAGATGAAATGGAAACTGATGAAGATGAAGAAGAAGAAGAAAGAGAAGAAGCTTTTGGTGATCTTAGTGCTG
GTGAAGTTGATGACATCAGTGAGTGA

mRNA sequence

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Protein sequence

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MKKEMLKSPPITAFTPDGDYLAILSPNETVKASSFTLARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGV
IGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCD
MSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQ
PQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSGVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQ
EEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIES
RISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMETDEDEEEEEREEAFGDLSAGEVDDISE

MC09g0334 (gene) of Bitter gourd (Dali-11) v1 genome