; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0415 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0415
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationMC09:3734026..3737514
RNA-Seq ExpressionMC09g0415
SyntenyMC09g0415
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593336.1 hypothetical protein SDJN03_12812, partial [Cucurbita argyrosperma subsp. sororia]2.11e-5270.63Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQ++L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGLEL QRSFSITASNSSDGNS KE+      TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI LVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

KAG7025683.1 hypothetical protein SDJN02_12181 [Cucurbita argyrosperma subsp. argyrosperma]1.73e-5169.84Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQ++L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGLEL QRSFSITASNSSDGNS KE+      T DAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI LVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

XP_022145635.1 uncharacterized protein LOC111015032 [Momordica charantia]1.72e-75100Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII
        MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII

Query:  WMISSAFTSLIGLVVKLIPAK
        WMISSAFTSLIGLVVKLIPAK
Subjt:  WMISSAFTSLIGLVVKLIPAK

XP_022959607.1 uncharacterized protein LOC111460632 [Cucurbita moschata]4.95e-5169.84Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQL L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGL+L QRSFSITASNSSDGNS KE+      TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI L VKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

XP_023004845.1 uncharacterized protein LOC111498025 [Cucurbita maxima]2.99e-5271.43Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQL L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGL+L QRSFSITASNSSDGNS KEE      TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI LVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

TrEMBL top hitse value%identityAlignment
A0A6J1CV15 uncharacterized protein LOC1110150328.31e-76100Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII
        MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII

Query:  WMISSAFTSLIGLVVKLIPAK
        WMISSAFTSLIGLVVKLIPAK
Subjt:  WMISSAFTSLIGLVVKLIPAK

A0A6J1GPL5 uncharacterized protein LOC1114559847.99e-5071.43Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MASIF+APPS+LNL SR S  +   L  SI G++ HS+ FP+PSFR+R+TKGLEL QRSFSITASNSSDGNSIKEE     A+ DAQGPPFLTILAG FV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++WM+SSA TSLIGLVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

A0A6J1H506 uncharacterized protein LOC1114606322.40e-5169.84Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQL L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGL+L QRSFSITASNSSDGNS KE+      TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI L VKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

A0A6J1JUC2 uncharacterized protein LOC1114884361.28e-4872.36Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MASIFAAPPS+LNL SR S  +   L  SI G++ HS+ FP+PSFR+R+TKGLELS RSFSITASNSSDGNSI+EE     A+ DAQGPPFLTILAG FV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLI
        FSL++WM+SSA TSLIGLVVKLI
Subjt:  FSLIIWMISSAFTSLIGLVVKLI

A0A6J1KVQ7 uncharacterized protein LOC1114980251.45e-5271.43Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQL L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGL+L QRSFSITASNSSDGNS KEE      TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI LVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTGTTCTCGCCGCTCAAGTTCGAATCGCAGAGCCCTTCTCCCCTCCATTGTCGGCGTTAAACTTCACTC
GAGCGGCTTTCCAGTTCCTTCTTTCAGGTTCAGGCACACCAAAGGATTGGAATTAAGCCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCATTA
AGGAGGAAGCAACTGGTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTCTCCCTCATAATTTGGATGATCAGTTCTGCTTTCACGTCACTT
ATAGGACTAGTCGTCAAGCTGATCCCGGCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
GCGTAATCCACGCTCCGTTCTGAGTCTCGGGTGGACTCTCTTCTTTTTGGAAGTTCCAAAGTCTTTGTAACCGAACGGGAAGTTAATGGCTTCGATCTTCGCCGCGCCGC
CGTCTCAACTGAATCTCTGTTCTCGCCGCTCAAGTTCGAATCGCAGAGCCCTTCTCCCCTCCATTGTCGGCGTTAAACTTCACTCGAGCGGCTTTCCAGTTCCTTCTTTC
AGGTTCAGGCACACCAAAGGATTGGAATTAAGCCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCATTAAGGAGGAAGCAACTGGTGATGCCCA
AGGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTCTCCCTCATAATTTGGATGATCAGTTCTGCTTTCACGTCACTTATAGGACTAGTCGTCAAGCTGATCC
CGGCAAAGTAATGTAGCATTATTGTAGCTCTATCACAACTCACTTTTAGCTAGTTTTAGCTTATATCTAGTGCATAATTTTTATTTTCATCTCAATTACGCATAGCTTCA
GCCTTCAAATAATGTTTGATCTGAACTCGGATATATGCGTAAACCAACTTAAATGAACTTTGTAGATTAAGCCATCTACTAAGTAGTTTAAGTTAACCCACCTTAGCCTT
CATATATAGGTAGGTGAGTAGCTCTCAAGAAATATACCACCCCCACATTTGGAATCAAATCCTCTTTATAAAAGCTATTCAAGAAACTTTTTTATTACGTACTATGAAAG
AGTGATATATTTTCTCTCGTTAATCTTGTCTGATAGTCTGTTTAAAGCCCAAAAAAGAATAATATTTTCTTCCCATCGTCTGTTTTGACAAATAGGAGAGAAAAATGTAG
TGAAGAAGAGAATGAGAAATTTTGGAAAATGTTATCCAAGACAAGAGTGCGAACTTTTTTGTACACCATGACCGATATAGATAAAAAGTGGATTAAGAATGCCCTAAATG
GAATTGTAACAGCCAATAATTAAAAAAGAAAAAAAAAAGGTCATACATCATATTAGCAAATTTGACTTGACTTTACATCAATAAAAAGGTTCCATGTCTTTTTTCTTTAG
ACAACAATGAAGGACAGTTTCTACAGAGAAGATAAGATGGAATAATAAATCATCTGTTGGAAAAATACATTCCAAGCGCTGAAAATGAAATTACTAGTTTTTGTTTTAAC
GCGTTATTTACCGAATATAACAAAATTGTGATAGATAAATGAACTGACTCGACTTAGCCCTTAAAATACACAAAACGAAGTCATATCTAACTGGCAAAATTATCTTTATG
TTTCTGGATTTTCTCCAACTGAAGATGTAAATTTTCGCCGTTCATCGGCCGAAGCAGTGATTACTGGCATCCAAATATCAGCAGTGTCACTCAACAGAGACTGCACCTGT
GGATCTGCAGCCATTGCTGAAGAAATCATTTCATCAACATCATCTAACTTTTCAGATAACTTATCCAACTCCTTGGCAATTTCCAGCTGAATAGAGGGCACAAAATAAGA
TTTTTAGGCATTAGATTCAATCTCTTCAAGAAAATGCTAGCAATGGAATAAATATAAATGCAACGAATATACAGGAGACTAGGATACTAGAAGACTGACTTCATCAAGCT
GCTTCAAGGACTTCGAGGGTACTTTTGTAACTTCAAGTCCGAGGGCTTCGATCTTGGTACGCAATTCAACTTCTTCCTGGTTGGTCAGTGATTCCACCTGTAAAACAAAT
GCTTCTAAGGAAAGAAAGTGCACAAGCTAACGATGGACACGATTTCCATTTATTACACAATGCTACTCGCTCAAACAAGAAACATTATGGCCCAAGGACAAGGAGAGTGC
AAACATAACTTTTTATTAGGTAATTGAAGACAAACAATAACTTGGATATACTCGTCACTGCTTCACCGAGCAATTTCCACAGGGAACAGTTCACGAGAACACGCCCCTGT
ACAGTCTTCATGTTGATTCTGTGTATGTTCTTTTGTCACGTAATAGCATGACAATTTGAAAAATTGGCTCCTCTCATCCATG
Protein sequenceShow/hide protein sequence
MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLIIWMISSAFTSL
IGLVVKLIPAK