; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0480 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0480
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionH/ACA ribonucleoprotein complex non-core subunit NAF1
Genome locationMC09:4287746..4289866
RNA-Seq ExpressionMC09g0480
SyntenyMC09g0480
Gene Ontology termsGO:0000493 - box H/ACA snoRNP assembly (biological process)
GO:0001522 - pseudouridine synthesis (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005732 - small nucleolar ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR007504 - H/ACA ribonucleoprotein complex, subunit Gar1/Naf1
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR038664 - H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain
IPR040309 - H/ACA ribonucleoprotein complex non-core subunit Naf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459182.1 PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X2 [Cucumis melo]4.88e-27672.46Show/hide
Query:  VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEF
        +QAS EA + S DLN IIEEG+SKVSLV   G T  ++LE + DD E+DVESEGTSS +TSSSSS G  S++E D+EEEN+SSSSS     D ++EE E+
Subjt:  VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEF

Query:  TVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSII
         V+AEG+ EIGELEEGEIRD D EDEEASAD MVAWD  DGEDLD DD+      EEA A GGPI+SKNELKVLPPVPQV+ATLQPHHQ+LPVGVVLS++
Subjt:  TVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSII

Query:  GSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE
        G+QVIVEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV DD 
Subjt:  GSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE

Query:  EFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNH
        EFSDDEKELEFK+MQRLAKR+MN+NQ+ NGN NN RKKKN+++ARKF Q T++N  +PDE +  YGQ TP+QA + EG KFD  T Q+AKMDM+QPS N 
Subjt:  EFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNH

Query:  NQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFG
        NQ  GPP APF Y GGCP+ S A QCF+N  GV+  FPPTYNP FTPA+NGIRP EMPFQ  QQQNPFFPN LPMNGMPWLLQN P QQ+PQMPM+NTF 
Subjt:  NQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFG

Query:  GVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHF
        G AYPQG +G+S  LPN LT+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G FSGN AP QFN +SSS QG KS GRGG  HF
Subjt:  GVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHF

Query:  RGRRGRRQTR
        RGRRG +Q+R
Subjt:  RGRRGRRQTR

XP_016902388.1 PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo]1.05e-27472.05Show/hide
Query:  VRSEPV---VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSC
        VRSE     +QAS EA + S DLN IIEEG+SKVSLV   G T  ++LE + DD E+DVESEGTSS +TSSSSS G  S++E D+EEEN+SSSSS     
Subjt:  VRSEPV---VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSC

Query:  DEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQIL
        D ++EE E+ V+AEG+ EIGELEEGEIRD D EDEEASAD MVAWD  DGEDLD DD+      EEA A GGPI+SKNELKVLPPVPQV+ATLQPHHQ+L
Subjt:  DEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQIL

Query:  PVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV
        PVGVVLS++G+QVIVEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGV
Subjt:  PVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV

Query:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKM
        NDEEV DD EFSDDEKELEFK+MQRLAKR+MN+NQ+ NGN NN RKKKN+++ARKF Q T++N  +PDE +  YGQ TP+QA + EG KFD  T Q+AKM
Subjt:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKM

Query:  DMIQPSSNHNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP
        DM+QPS N NQ  GPP APF Y GGCP+ S A QCF+N  GV+  FPPTYNP FTPA+NGIRP EMPFQ  QQQNPFFPN LPMNGMPWLLQN P QQ+P
Subjt:  DMIQPSSNHNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP

Query:  QMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKS
        QMPM+NTF G AYPQG +G+S  LPN LT+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G FSGN AP QFN +SSS QG KS
Subjt:  QMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKS

Query:  FGRGGDSHFRGRRGRRQTR
         GRGG  HFRGRRG +Q+R
Subjt:  FGRGGDSHFRGRRGRRQTR

XP_022149469.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia]0.088.12Show/hide
Query:  SEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEE
        S PVVQAS+EASDKSRDLN IIEEG+SKVSLVTGSGSTGNIDLEC+KD+ ESDVESEGTSSATTSSSSSHGR  NDEKD+EEEN+SSSSS +SSCD+EEE
Subjt:  SEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEE

Query:  ENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSIIGS
        EN+FT+KAEG GEIGELEEGEIRD++ EDEEAS DQMVAWDG DG D DIDDDEE G  GGPISSKNELKVLPPVPQVYATLQP HQI+PVGVVLSIIG+
Subjt:  ENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSIIGS

Query:  QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEF
        QVIVEGVEKHNPLNEGSILWITE RSPLGL+DEIFGPVK PYYSVRYNSESEVPTGICGGT VSFVLEFADY+LNNKDLYKKGYDASGVNDEEV DD+EF
Subjt:  QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEF

Query:  SDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHN
        SDDEKELEFKKMQRLAKRS NNNQKNGNGNNTRKKKNS QARKF QRTYQN KIP+E RNYG+PTPQQAMM EGSKF QHT Q+AKMDM+QPSSN NQHN
Subjt:  SDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHN

Query:  GPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGVAY
        GPP+APF YHGGCPNPSAA QCFING GVIP FPPTY+PCFTPA+NGIRPTEMPF LQQQQNPFFPNALPMNGMPWLLQN P QQVPQMPMMNTFGG AY
Subjt:  GPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGVAY

Query:  PQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRGRR
        PQGLIGTSP LPNPLTSVG QGIHSGGLQFGQNQNL QPP PLAIPGSMEATQ FNPANSHP GAF GN APPQFNPDSSSSQG KS GRGG SHFRGRR
Subjt:  PQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRGRR

Query:  GRRQTR
        GRRQTR
Subjt:  GRRQTR

XP_022150383.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia]0.095.23Show/hide
Query:  LVRSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDE
        +V S PVVQAS+EASDKSRDLN IIEEG+SKVSLVTGSGSTGNIDLEC+KD+ ESDVESEGTSSATTSSSSSHGR  NDEKD+EEEN+SSSSS +SSCD+
Subjt:  LVRSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDE

Query:  EEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSI
        EEEEN+FT+KAEG GEIGELEEGEIRD++ EDEEAS DQMVAWDG DG D DIDDDEE G  GGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSI
Subjt:  EEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSI

Query:  IGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD
        IGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD
Subjt:  IGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD

Query:  EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHN
        EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHN
Subjt:  EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHN

Query:  QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGV
        QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGV
Subjt:  QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGV

Query:  AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRG
        AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRG
Subjt:  AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRG

Query:  RRGRRQTR
        RRGRRQTR
Subjt:  RRGRRQTR

XP_031736891.1 H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X3 [Cucumis sativus]6.37e-27571.08Show/hide
Query:  EASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAE
        EA   S D N IIEEG+SKVSLV   G    ++LE + DD E DVESEGTSSA+TSSSSS G  S++E D+EEE++SSS+S  + CD+EEE+ E  V+AE
Subjt:  EASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAE

Query:  GRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVI
        G+ EIGELEEGEIRD D EDEEA AD MVAWD  DGEDL  DD+      EEAGA GGPI+SKNELKVLPPVPQV+ATLQPHHQ+LPVGVVLS++G+QVI
Subjt:  GRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVI

Query:  VEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDD
        VEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV DD EFSDD
Subjt:  VEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDD

Query:  EKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHNG
        EKELEFKKMQRLAKR+MN+NQ+ N N NN RKKKN+++ARKF +RT++N  +PDEP+  YGQ TP+QA + EG KFD  T  +AKMDM++PS N NQ  G
Subjt:  EKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHNG

Query:  PPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQ--------------QVP
        PP APF YHGGCPNPS A QCF+NG G++  FPPTYNPCFTPA+NGIRP EMPFQ QQQQNPFFPN LPMNGMPWLLQN   Q              Q+P
Subjt:  PPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQ--------------QVP

Query:  QMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKS
        QMPM+NTF G AYPQG +G S  LPN  T+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G FSGN AP QFN +SSS QG KS
Subjt:  QMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKS

Query:  FGRGGDSHFRGRRGRRQTR
         GRGG+ HFRGRRG RQ+R
Subjt:  FGRGGDSHFRGRRGRRQTR

TrEMBL top hitse value%identityAlignment
A0A1S3CAT3 H/ACA ribonucleoprotein complex non-core subunit NAF12.36e-27672.46Show/hide
Query:  VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEF
        +QAS EA + S DLN IIEEG+SKVSLV   G T  ++LE + DD E+DVESEGTSS +TSSSSS G  S++E D+EEEN+SSSSS     D ++EE E+
Subjt:  VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEF

Query:  TVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSII
         V+AEG+ EIGELEEGEIRD D EDEEASAD MVAWD  DGEDLD DD+      EEA A GGPI+SKNELKVLPPVPQV+ATLQPHHQ+LPVGVVLS++
Subjt:  TVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSII

Query:  GSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE
        G+QVIVEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV DD 
Subjt:  GSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE

Query:  EFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNH
        EFSDDEKELEFK+MQRLAKR+MN+NQ+ NGN NN RKKKN+++ARKF Q T++N  +PDE +  YGQ TP+QA + EG KFD  T Q+AKMDM+QPS N 
Subjt:  EFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNH

Query:  NQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFG
        NQ  GPP APF Y GGCP+ S A QCF+N  GV+  FPPTYNP FTPA+NGIRP EMPFQ  QQQNPFFPN LPMNGMPWLLQN P QQ+PQMPM+NTF 
Subjt:  NQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFG

Query:  GVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHF
        G AYPQG +G+S  LPN LT+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G FSGN AP QFN +SSS QG KS GRGG  HF
Subjt:  GVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHF

Query:  RGRRGRRQTR
        RGRRG +Q+R
Subjt:  RGRRGRRQTR

A0A1S4E2D7 H/ACA ribonucleoprotein complex non-core subunit NAF15.09e-27572.05Show/hide
Query:  VRSEPV---VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSC
        VRSE     +QAS EA + S DLN IIEEG+SKVSLV   G T  ++LE + DD E+DVESEGTSS +TSSSSS G  S++E D+EEEN+SSSSS     
Subjt:  VRSEPV---VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSC

Query:  DEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQIL
        D ++EE E+ V+AEG+ EIGELEEGEIRD D EDEEASAD MVAWD  DGEDLD DD+      EEA A GGPI+SKNELKVLPPVPQV+ATLQPHHQ+L
Subjt:  DEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQIL

Query:  PVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV
        PVGVVLS++G+QVIVEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGV
Subjt:  PVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV

Query:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKM
        NDEEV DD EFSDDEKELEFK+MQRLAKR+MN+NQ+ NGN NN RKKKN+++ARKF Q T++N  +PDE +  YGQ TP+QA + EG KFD  T Q+AKM
Subjt:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKM

Query:  DMIQPSSNHNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP
        DM+QPS N NQ  GPP APF Y GGCP+ S A QCF+N  GV+  FPPTYNP FTPA+NGIRP EMPFQ  QQQNPFFPN LPMNGMPWLLQN P QQ+P
Subjt:  DMIQPSSNHNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP

Query:  QMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKS
        QMPM+NTF G AYPQG +G+S  LPN LT+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G FSGN AP QFN +SSS QG KS
Subjt:  QMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKS

Query:  FGRGGDSHFRGRRGRRQTR
         GRGG  HFRGRRG +Q+R
Subjt:  FGRGGDSHFRGRRGRRQTR

A0A5D3CIV9 H/ACA ribonucleoprotein complex non-core subunit NAF15.09e-27572.05Show/hide
Query:  VRSEPV---VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSC
        VRSE     +QAS EA + S DLN IIEEG+SKVSLV   G T  ++LE + DD E+DVESEGTSS +TSSSSS G  S++E D+EEEN+SSSSS     
Subjt:  VRSEPV---VQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSC

Query:  DEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQIL
        D ++EE E+ V+AEG+ EIGELEEGEIRD D EDEEASAD MVAWD  DGEDLD DD+      EEA A GGPI+SKNELKVLPPVPQV+ATLQPHHQ+L
Subjt:  DEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD------EEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQIL

Query:  PVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV
        PVGVVLS++G+QVIVEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGV
Subjt:  PVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV

Query:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKM
        NDEEV DD EFSDDEKELEFK+MQRLAKR+MN+NQ+ NGN NN RKKKN+++ARKF Q T++N  +PDE +  YGQ TP+QA + EG KFD  T Q+AKM
Subjt:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRN-YGQPTPQQAMMPEGSKFDQHTTQEAKM

Query:  DMIQPSSNHNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP
        DM+QPS N NQ  GPP APF Y GGCP+ S A QCF+N  GV+  FPPTYNP FTPA+NGIRP EMPFQ  QQQNPFFPN LPMNGMPWLLQN P QQ+P
Subjt:  DMIQPSSNHNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP

Query:  QMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKS
        QMPM+NTF G AYPQG +G+S  LPN LT+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G FSGN AP QFN +SSS QG KS
Subjt:  QMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKS

Query:  FGRGGDSHFRGRRGRRQTR
         GRGG  HFRGRRG +Q+R
Subjt:  FGRGGDSHFRGRRGRRQTR

A0A6J1D5T5 H/ACA ribonucleoprotein complex non-core subunit NAF10.088.12Show/hide
Query:  SEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEE
        S PVVQAS+EASDKSRDLN IIEEG+SKVSLVTGSGSTGNIDLEC+KD+ ESDVESEGTSSATTSSSSSHGR  NDEKD+EEEN+SSSSS +SSCD+EEE
Subjt:  SEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEE

Query:  ENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSIIGS
        EN+FT+KAEG GEIGELEEGEIRD++ EDEEAS DQMVAWDG DG D DIDDDEE G  GGPISSKNELKVLPPVPQVYATLQP HQI+PVGVVLSIIG+
Subjt:  ENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSIIGS

Query:  QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEF
        QVIVEGVEKHNPLNEGSILWITE RSPLGL+DEIFGPVK PYYSVRYNSESEVPTGICGGT VSFVLEFADY+LNNKDLYKKGYDASGVNDEEV DD+EF
Subjt:  QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEF

Query:  SDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHN
        SDDEKELEFKKMQRLAKRS NNNQKNGNGNNTRKKKNS QARKF QRTYQN KIP+E RNYG+PTPQQAMM EGSKF QHT Q+AKMDM+QPSSN NQHN
Subjt:  SDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHN

Query:  GPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGVAY
        GPP+APF YHGGCPNPSAA QCFING GVIP FPPTY+PCFTPA+NGIRPTEMPF LQQQQNPFFPNALPMNGMPWLLQN P QQVPQMPMMNTFGG AY
Subjt:  GPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGVAY

Query:  PQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRGRR
        PQGLIGTSP LPNPLTSVG QGIHSGGLQFGQNQNL QPP PLAIPGSMEATQ FNPANSHP GAF GN APPQFNPDSSSSQG KS GRGG SHFRGRR
Subjt:  PQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRGRR

Query:  GRRQTR
        GRRQTR
Subjt:  GRRQTR

A0A6J1D9A9 H/ACA ribonucleoprotein complex non-core subunit NAF10.095.23Show/hide
Query:  LVRSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDE
        +V S PVVQAS+EASDKSRDLN IIEEG+SKVSLVTGSGSTGNIDLEC+KD+ ESDVESEGTSSATTSSSSSHGR  NDEKD+EEEN+SSSSS +SSCD+
Subjt:  LVRSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDE

Query:  EEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSI
        EEEEN+FT+KAEG GEIGELEEGEIRD++ EDEEAS DQMVAWDG DG D DIDDDEE G  GGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSI
Subjt:  EEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSI

Query:  IGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD
        IGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD
Subjt:  IGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD

Query:  EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHN
        EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHN
Subjt:  EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHN

Query:  QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGV
        QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGV
Subjt:  QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGV

Query:  AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRG
        AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRG
Subjt:  AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRG

Query:  RRGRRQTR
        RRGRRQTR
Subjt:  RRGRRQTR

SwissProt top hitse value%identityAlignment
A6ZRW0 H/ACA ribonucleoprotein complex non-core subunit NAF11.1e-0926.04Show/hide
Query:  NIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVA
        ++++E  KDD++  +  +G                N+ K DE    +  S+G  S   E E +  +      G  G  ++   +D++ EDE         
Subjt:  NIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVA

Query:  WDGGDGEDLDIDDDEEAGAVGGPISSKNEL--KVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGV--EKHNPLNEGSILWITELRSPLGLVDEIF
          GGD   ++ +D++E  +  GPI SKNE+  + +P +P+ Y  +     I P+GV+ S   + +I+      +   L EGSI  + E R+ +G++ E+F
Subjt:  WDGGDGEDLDIDDDEEAGAVGGPISSKNEL--KVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGV--EKHNPLNEGSILWITELRSPLGLVDEIF

Query:  GPVKNPYYSVRY-----NSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFKKMQR-LAKRSMNNNQKNGN
        GP++NP+Y ++      N   E+   +  G     V   A ++   +    KG DAS   DEE+ ++E EFSDDEKE  FKKM++   +R   +N+K  N
Subjt:  GPVKNPYYSVRY-----NSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFKKMQR-LAKRSMNNNQKNGN

Query:  GNNTRKKKNSSQAR-----KFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQE----AKMDMIQPSSNH----NQHNG---PPFAPF---YH
         ++  K K + Q +     K       +   P +   Y     ++ +  E S              ++   Q S+N+     Q NG   PP++PF    +
Subjt:  GNNTRKKKNSSQAR-----KFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQE----AKMDMIQPSSNH----NQHNG---PPFAPF---YH

Query:  GGCPNPSAAGQCFINGGGVIP--PFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNAL-PMNGMPWLLQNHPTQQVP
           P P             +P    PP YN       N   PT+  F    Q  P  P  + PMN M   +   P  Q P
Subjt:  GGCPNPSAAGQCFINGGGVIP--PFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNAL-PMNGMPWLLQNHPTQQVP

O14360 H/ACA ribonucleoprotein complex non-core subunit NAF13.7e-1026.48Show/hide
Query:  DEEASADQMVAWDGGDGEDLDIDD--DEEAGAVGGPISSKNEL-KVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEG-VEKHNPLNEGSILWITEL
        D  + ++   ++   D E+   ++  D E+ A   P  + NEL + +   P++   LQP+  I P+G ++ ++  +V+V+  ++    + +   +   E 
Subjt:  DEEASADQMVAWDGGDGEDLDIDD--DEEAGAVGGPISSKNEL-KVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEG-VEKHNPLNEGSILWITEL

Query:  RSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV-LDDEEFSDDEKELEFKKMQRLAKR---S
        RS +G + E FGPV +PYY VR+++E E      C G  V +V   A+ +      Y KG DAS V DEE+   ++EFSDDE E+  K++++  KR   S
Subjt:  RSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV-LDDEEFSDDEKELEFKKMQRLAKR---S

Query:  MNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEP-RNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHNGPPFAPFYHGGCPNPSAA
        M +  +   G    +  N +  R +    YQ  +  + P + + Q  P  ++         ++TQ      +  + N+ Q + PPF P Y+      S A
Subjt:  MNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEP-RNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHNGPPFAPFYHGGCPNPSAA

Query:  G-QCFINGGGVIPPFPPTYNP
          Q +       PP   +++P
Subjt:  G-QCFINGGGVIPPFPPTYNP

P53919 H/ACA ribonucleoprotein complex non-core subunit NAF13.7e-1025.93Show/hide
Query:  NIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVA
        ++++E  KDD++  +  +G                N+ K DE    +  S+G  S   E E +  +      G  G  ++   +D++ EDE         
Subjt:  NIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVA

Query:  WDGGDGEDLDIDDDEEAGAVGGPISSKNEL--KVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGV--EKHNPLNEGSILWITELRSPLGLVDEIF
          GGD   ++ +D++E  +  GPI SKNE+  + +P +P+ Y  +     I P+GV+ S   + +I+      +   L EGSI  + E R+ +G++ E+F
Subjt:  WDGGDGEDLDIDDDEEAGAVGGPISSKNEL--KVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGV--EKHNPLNEGSILWITELRSPLGLVDEIF

Query:  GPVKNPYYSVRY-----NSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFKKM---QRLAKRSMNNNQKN
        GP++NP+Y ++      N   E+   +  G     V   A ++   +    KG DAS   DEE+ ++E EFSDDEKE  FKKM   QR  K+  N    N
Subjt:  GPVKNPYYSVRY-----NSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFKKM---QRLAKRSMNNNQKN

Query:  GNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQH-------------NG---PPFAPF---
         + N   K+    +A    +         + P  +G  +       E  K +   T         P + H+Q              NG   PP++PF   
Subjt:  GNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQH-------------NG---PPFAPF---

Query:  YHGGCPNPSAAGQCFINGGGVIP--PFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNAL-PMNGMPWLLQNHPTQQVP
         +   P P             +P    PP YN       N   PT+  F    Q  P  P  + PMN M   +   P  Q P
Subjt:  YHGGCPNPSAAGQCFINGGGVIP--PFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNAL-PMNGMPWLLQNHPTQQVP

Q52KK4 H/ACA ribonucleoprotein complex non-core subunit NAF12.3e-0728.04Show/hide
Query:  SSSHGRDSNDEKD-DEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISS
        S S   DS+ E D D   ++SSSSS +SSC                     L +GE  D+ +E E  +                            P+ +
Subjt:  SSSHGRDSNDEKD-DEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISS

Query:  KNELKV--LPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTH
        K+EL +  LP V ++  TL     + P+G V SII   VI+E +    P+NE ++++ ++ R   G + EIFGPV +P+Y +R+NS   + + GI     
Subjt:  KNELKV--LPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTH

Query:  VSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFK--KMQRLAKRSMNNNQKNGNGNN---TRKKKNSSQARKFDQRTYQNEK
        + F   + +F  Y+   K    +G DAS  ND+E   +  +FSDDEKE E K  K  ++  R    ++ N +G +     +  N++ + +  +  +  E 
Subjt:  VSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFK--KMQRLAKRSMNNNQKNGNGNN---TRKKKNSSQARKFDQRTYQNEK

Query:  IPDEPR------NYGQPTPQQ
            PR      ++G+P PQQ
Subjt:  IPDEPR------NYGQPTPQQ

Q96HR8 H/ACA ribonucleoprotein complex non-core subunit NAF11.2e-0526.15Show/hide
Query:  VESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD
        V S G +    +  S    DS+ + D E ++ SSSSS +SS       +                               +   V  DG D  DL I+ +
Subjt:  VESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDD

Query:  EEAGAVGGPISSKNELKV--LPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSES
         +      P+ +K+EL +  LP V ++   L    ++ P+G+V SII   VI+E +    P+NE ++++ ++ R   G + EIFGPV +P+Y +R+NS  
Subjt:  EEAGAVGGPISSKNELKV--LPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSES

Query:  EVPT-GICGGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFK-----KMQRLAKRSMNNNQKNGNGNNTRKKKNSSQA
         + + GI     + F   + +F  Y+   K    KG DAS  ND+E   +  +FSDDEKE E K     ++Q   K     N+   +     +  N+  +
Subjt:  EVPT-GICGGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFK-----KMQRLAKRSMNNNQKNGNGNNTRKKKNSSQA

Query:  RKFDQRTYQNEKI------PDEPRN-YGQPTPQ------QAMMPEGSKFDQHTTQEAKMDMIQ-PSSNHNQHN------GPPFAPFYHGGCPNPSAAGQC
             + Y+N +          PR+ +G+P PQ        +  E S F         M     P    + HN       PP  P  + G   P+ A   
Subjt:  RKFDQRTYQNEKI------PDEPRN-YGQPTPQ------QAMMPEGSKFDQHTTQEAKMDMIQ-PSSNHNQHN------GPPFAPFYHGGCPNPSAAGQC

Query:  FINGGGVIPPFPP
         +N    +PP PP
Subjt:  FINGGGVIPPFPP

Arabidopsis top hitse value%identityAlignment
AT1G03530.1 nuclear assembly factor 18.7e-7137.33Show/hide
Query:  SEPVVQASVEASDKSRDLN------------YIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSS
        +EPVV +    +  + DL+              IE G+ KVSL        + + + + D  ES+ E+  +S++++ SSSS   +S++++ D+EEN    
Subjt:  SEPVVQASVEASDKSRDLN------------YIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSS

Query:  SSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIR-------DIDIEDEEASAD----------QMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKV
                ++EE+ E  V  +     GELEEGEI        D DIEDE+   D          +MVAW   + +DL +   E       PI SKNELK 
Subjt:  SSGNSSCDEEEEENEFTVKAEGRGEIGELEEGEIR-------DIDIEDEEASAD----------QMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKV

Query:  LPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFAD
        LPPVP V  TL+PHH  LPVGVVLS++ +QVIVEG+EKH+PL EGSILWITE R+PLGLVDEIFGPVK PYY VR+NSESEVP G+C GT VSFV +FA 
Subjt:  LPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFAD

Query:  YVLNNKDLYKKGYDASGVNDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQAR---KFDQRTYQNEKIPDEPRN-----YGQ
        ++LN K+L KKGYDASG NDEE+ D+ EFSDDEKE E+++MQ+L KR M ++QK GN  N +KKKN    R    +     +N+       N      G 
Subjt:  YVLNNKDLYKKGYDASGVNDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQAR---KFDQRTYQNEKIPDEPRN-----YGQ

Query:  PTPQ-QAMMPEGSKFDQHTTQE---------AKMDMIQPSSNHNQHNGPPFAPFYHGG-CPNPSAAGQCFINGGGVIPPFPPTYNP-CFTPAINGIRPTE
        P PQ     P  + +   + Q+          +M M  P       N   F P ++GG  P P   G      G    P+P      CF           
Subjt:  PTPQ-QAMMPEGSKFDQHTTQE---------AKMDMIQPSSNHNQHNGPPFAPFYHGG-CPNPSAAGQCFINGGGVIPPFPPTYNP-CFTPAINGIRPTE

Query:  MPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEAT
        M   +QQQ     PN L  N     LQ HP Q     P          P       P   +P+                Q Q + +P SP      M+A 
Subjt:  MPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEAT

Query:  QQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRGR-RGR
            P  S    + S   +P    P S     G+S  RG   H RGR RGR
Subjt:  QQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRGR-RGR

AT4G03380.1 BEST Arabidopsis thaliana protein match is: nuclear assembly factor 1 (TAIR:AT1G03530.1)1.5e-0639.29Show/hide
Query:  LPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVD-EIFGPVKNPYYSVRY-NSESEVPTGICGGTHVSFVLEFA
        +P GVV  +    ++V     H PLN G++L ITE + PLG VD   FG V NP Y V+  +SE ++P    GG   SF ++ +
Subjt:  LPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVD-EIFGPVKNPYYSVRY-NSESEVPTGICGGTHVSFVLEFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGTCAGGTCTGAGCCAGTTGTGCAGGCGAGTGTTGAGGCTTCTGATAAGTCTAGGGATTTGAATTACATAATCGAGGAAGGGATATCAAAGGTTAGTTTGGTTACTGG
AAGTGGAAGCACCGGGAACATTGATTTAGAGTGTCAAAAGGATGACATTGAAAGTGATGTTGAGTCTGAGGGCACAAGTTCAGCTACAACATCCAGTAGCAGTAGCCATG
GCAGAGACAGCAATGATGAAAAAGATGACGAGGAAGAAAATGCATCATCTTCTAGTAGTGGCAACAGTAGTTGCGATGAAGAAGAAGAGGAGAATGAGTTCACTGTGAAA
GCAGAGGGACGTGGAGAAATCGGTGAACTCGAAGAAGGTGAGATAAGGGACATTGACATTGAAGACGAAGAGGCTTCTGCAGATCAAATGGTTGCGTGGGATGGTGGTGA
TGGTGAGGACCTGGACATTGATGATGATGAAGAGGCTGGTGCTGTAGGAGGGCCAATTAGTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCAGGTGTATGCCA
CACTACAGCCACACCACCAGATTCTTCCTGTTGGAGTTGTTTTGTCAATAATTGGCAGTCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTTAATGAAGGCTCT
ATCCTCTGGATAACTGAACTTAGATCTCCATTGGGGTTGGTAGATGAAATTTTTGGACCAGTAAAAAATCCTTATTATTCCGTAAGATACAATTCTGAAAGTGAAGTTCC
TACAGGGATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCTGATTATGTGCTCAACAACAAAGACCTATACAAGAAGGGGTACGATGCATCTGGAGTGAATG
ATGAAGAGGTGTTAGACGATGAAGAGTTTTCAGATGATGAGAAAGAGCTCGAGTTCAAGAAAATGCAGAGGTTGGCTAAGAGGTCTATGAATAACAACCAGAAAAATGGG
AACGGAAACAACACTAGAAAGAAGAAAAACTCTAGTCAAGCCAGGAAATTCGATCAGCGTACGTATCAGAACGAAAAGATACCCGATGAGCCCAGAAATTATGGTCAGCC
CACACCCCAGCAAGCAATGATGCCTGAGGGCAGCAAATTTGATCAGCACACAACCCAGGAAGCAAAGATGGATATGATTCAGCCATCTTCCAATCACAACCAGCACAATG
GCCCTCCTTTTGCTCCATTTTATCACGGTGGTTGTCCGAACCCTTCAGCGGCAGGGCAATGTTTTATCAATGGAGGTGGTGTTATTCCACCCTTTCCACCAACGTACAAC
CCCTGCTTTACCCCAGCAATAAATGGCATTAGGCCAACTGAAATGCCATTTCAGCTTCAGCAGCAGCAGAATCCATTCTTTCCCAACGCCCTTCCAATGAATGGTATGCC
ATGGCTTTTACAGAATCACCCTACTCAGCAAGTGCCTCAAATGCCTATGATGAATACCTTTGGAGGAGTGGCATACCCACAGGGGCTCATAGGTACATCACCCGGTCTAC
CAAATCCTTTGACAAGTGTCGGGGCACAAGGAATCCATTCTGGTGGCCTACAGTTTGGACAGAATCAAAACTTGCTGCAGCCTCCTTCCCCCCTTGCCATCCCTGGAAGC
ATGGAAGCAACACAGCAATTCAATCCAGCCAACTCGCACCCATCTGGTGCATTTTCTGGAAACGGAGCACCACCGCAATTCAACCCGGACTCATCTTCAAGCCAGGGAGG
GAAATCTTTTGGTCGAGGAGGGGATTCCCATTTTAGAGGTAGAAGAGGTCGGCGACAAACAAGA
mRNA sequenceShow/hide mRNA sequence
CTTGTCAGGTCTGAGCCAGTTGTGCAGGCGAGTGTTGAGGCTTCTGATAAGTCTAGGGATTTGAATTACATAATCGAGGAAGGGATATCAAAGGTTAGTTTGGTTACTGG
AAGTGGAAGCACCGGGAACATTGATTTAGAGTGTCAAAAGGATGACATTGAAAGTGATGTTGAGTCTGAGGGCACAAGTTCAGCTACAACATCCAGTAGCAGTAGCCATG
GCAGAGACAGCAATGATGAAAAAGATGACGAGGAAGAAAATGCATCATCTTCTAGTAGTGGCAACAGTAGTTGCGATGAAGAAGAAGAGGAGAATGAGTTCACTGTGAAA
GCAGAGGGACGTGGAGAAATCGGTGAACTCGAAGAAGGTGAGATAAGGGACATTGACATTGAAGACGAAGAGGCTTCTGCAGATCAAATGGTTGCGTGGGATGGTGGTGA
TGGTGAGGACCTGGACATTGATGATGATGAAGAGGCTGGTGCTGTAGGAGGGCCAATTAGTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCAGGTGTATGCCA
CACTACAGCCACACCACCAGATTCTTCCTGTTGGAGTTGTTTTGTCAATAATTGGCAGTCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTTAATGAAGGCTCT
ATCCTCTGGATAACTGAACTTAGATCTCCATTGGGGTTGGTAGATGAAATTTTTGGACCAGTAAAAAATCCTTATTATTCCGTAAGATACAATTCTGAAAGTGAAGTTCC
TACAGGGATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCTGATTATGTGCTCAACAACAAAGACCTATACAAGAAGGGGTACGATGCATCTGGAGTGAATG
ATGAAGAGGTGTTAGACGATGAAGAGTTTTCAGATGATGAGAAAGAGCTCGAGTTCAAGAAAATGCAGAGGTTGGCTAAGAGGTCTATGAATAACAACCAGAAAAATGGG
AACGGAAACAACACTAGAAAGAAGAAAAACTCTAGTCAAGCCAGGAAATTCGATCAGCGTACGTATCAGAACGAAAAGATACCCGATGAGCCCAGAAATTATGGTCAGCC
CACACCCCAGCAAGCAATGATGCCTGAGGGCAGCAAATTTGATCAGCACACAACCCAGGAAGCAAAGATGGATATGATTCAGCCATCTTCCAATCACAACCAGCACAATG
GCCCTCCTTTTGCTCCATTTTATCACGGTGGTTGTCCGAACCCTTCAGCGGCAGGGCAATGTTTTATCAATGGAGGTGGTGTTATTCCACCCTTTCCACCAACGTACAAC
CCCTGCTTTACCCCAGCAATAAATGGCATTAGGCCAACTGAAATGCCATTTCAGCTTCAGCAGCAGCAGAATCCATTCTTTCCCAACGCCCTTCCAATGAATGGTATGCC
ATGGCTTTTACAGAATCACCCTACTCAGCAAGTGCCTCAAATGCCTATGATGAATACCTTTGGAGGAGTGGCATACCCACAGGGGCTCATAGGTACATCACCCGGTCTAC
CAAATCCTTTGACAAGTGTCGGGGCACAAGGAATCCATTCTGGTGGCCTACAGTTTGGACAGAATCAAAACTTGCTGCAGCCTCCTTCCCCCCTTGCCATCCCTGGAAGC
ATGGAAGCAACACAGCAATTCAATCCAGCCAACTCGCACCCATCTGGTGCATTTTCTGGAAACGGAGCACCACCGCAATTCAACCCGGACTCATCTTCAAGCCAGGGAGG
GAAATCTTTTGGTCGAGGAGGGGATTCCCATTTTAGAGGTAGAAGAGGTCGGCGACAAACAAGA
Protein sequenceShow/hide protein sequence
LVRSEPVVQASVEASDKSRDLNYIIEEGISKVSLVTGSGSTGNIDLECQKDDIESDVESEGTSSATTSSSSSHGRDSNDEKDDEEENASSSSSGNSSCDEEEEENEFTVK
AEGRGEIGELEEGEIRDIDIEDEEASADQMVAWDGGDGEDLDIDDDEEAGAVGGPISSKNELKVLPPVPQVYATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGS
ILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQKNG
NGNNTRKKKNSSQARKFDQRTYQNEKIPDEPRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYN
PCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGS
MEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRGRRGRRQTR