; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0487 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0487
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUPF0496 protein 4-like
Genome locationMC09:4416544..4416891
RNA-Seq ExpressionMC09g0487
SyntenyMC09g0487
Gene Ontology termsNA
InterPro domainsIPR008511 - Protein BYPASS-related


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575710.1 UPF0496 protein 4, partial [Cucurbita argyrosperma subsp. sororia]4.90e-4473.28Show/hide
Query:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
        G +ASS+ S LQA E DVSSCL QF  SSSD  LLSF WL QLLQ LPI+HQAF KL  NLEHPVG+W   LVDGYLNY+LNLLDLLNS+SFSLSQLG+S
Subjt:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS

Query:  RLLLSHALGLIQSSPS
        R+ +S+AL LIQSSPS
Subjt:  RLLLSHALGLIQSSPS

KAG7025628.1 Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.95e-4169.57Show/hide
Query:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
        G++AS + S LQAF+++VSSCL Q   SSSDSR LSF WLLQLLQ LP++HQAF KL V+L+ PV +W  DLVDGYLNY+LNLLDLLNSVSFSLSQLG S
Subjt:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS

Query:  RLLLSHALGLIQSSP
        RL L++AL L++SSP
Subjt:  RLLLSHALGLIQSSP

XP_022154307.1 UPF0496 protein 4-like [Momordica charantia]2.54e-68100Show/hide
Query:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
        GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
Subjt:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS

Query:  RLLLSHALGLIQSSPS
        RLLLSHALGLIQSSPS
Subjt:  RLLLSHALGLIQSSPS

XP_022991783.1 UPF0496 protein 4-like [Cucurbita maxima]2.40e-4075.49Show/hide
Query:  ESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSS
        E DVSSCL QF  SSSD   LSF WLLQLLQ LPI+HQAF KL  NLEHPVG+W   LVDGYLNY+LNLLDLLNS+SFSLSQLG+SR+ +S AL LIQSS
Subjt:  ESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSS

Query:  PS
        PS
Subjt:  PS

XP_023549389.1 UPF0496 protein 4-like [Cucurbita pepo subsp. pepo]1.34e-4176.47Show/hide
Query:  ESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSS
        E DVSSCL QF  SSSD  LLSF WLLQLLQ LPI+HQAF KL  NLEHPVG+W   LVDGYLNY+LNLLDLLNS+SFSLSQLG+SR+ +S+AL LIQSS
Subjt:  ESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSS

Query:  PS
        PS
Subjt:  PS

TrEMBL top hitse value%identityAlignment
A0A5D3CEU0 UPF0496 protein 4-like1.66e-3565.79Show/hide
Query:  ASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQ-TLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRL
        AS + S L AFE DVS+CL     S+S S+ LSF +LLQLLQ  LP +HQ+F KL V+LE+PVG+W  DLVDGYLNY+LNLLDLLNS+SFSL+QLG SR+
Subjt:  ASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQ-TLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRL

Query:  LLSHALGLIQSSPS
         LS+AL LIQSSP+
Subjt:  LLSHALGLIQSSPS

A0A6J1DLC1 UPF0496 protein 4-like1.23e-68100Show/hide
Query:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
        GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
Subjt:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS

Query:  RLLLSHALGLIQSSPS
        RLLLSHALGLIQSSPS
Subjt:  RLLLSHALGLIQSSPS

A0A6J1H7D5 protein BPS1, chloroplastic-like1.90e-4068.7Show/hide
Query:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
        G++AS + S LQAF+++VSSCL Q   SSSDS  LSF WLLQLLQ LP++HQAF KL V+L+ PV +W  DLVDGYLNY+LNLLDLLNSVSFSLSQLG S
Subjt:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS

Query:  RLLLSHALGLIQSSP
        RL L++AL L++SSP
Subjt:  RLLLSHALGLIQSSP

A0A6J1JX95 UPF0496 protein 4-like1.16e-4075.49Show/hide
Query:  ESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSS
        E DVSSCL QF  SSSD   LSF WLLQLLQ LPI+HQAF KL  NLEHPVG+W   LVDGYLNY+LNLLDLLNS+SFSLSQLG+SR+ +S AL LIQSS
Subjt:  ESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSS

Query:  PS
        PS
Subjt:  PS

A0A6J1KTC2 protein BPS1, chloroplastic-like4.32e-3966.96Show/hide
Query:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
        G++AS + S LQAF+++VSSCL Q    SSDS  LSF WLLQLLQ LP++H+AF+KL V+L+ PV +W  DLVDGYLNY+LNLLDLLNSVSFSLSQLG S
Subjt:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS

Query:  RLLLSHALGLIQSSP
        RL L++AL L++SSP
Subjt:  RLLLSHALGLIQSSP

SwissProt top hitse value%identityAlignment
A2Z9A6 UPF0496 protein 42.0e-0530.97Show/hide
Query:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
        G+  S     L A   D  +  ++     + S +L+  W+   +  L  +H     L  +LE PV  W    VD YLN ++ LLD+  ++S  LS+L Q 
Subjt:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS

Query:  RLLLSHALGLIQS
        +LLL +AL ++ S
Subjt:  RLLLSHALGLIQS

Q337C0 UPF0496 protein 42.0e-0530.97Show/hide
Query:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS
        G+  S     L A   D  +  ++     + S +L+  W+   +  L  +H     L  +LE PV  W    VD YLN ++ LLD+  ++S  LS+L Q 
Subjt:  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQS

Query:  RLLLSHALGLIQS
        +LLL +AL ++ S
Subjt:  RLLLSHALGLIQS

Q9LMM6 Protein BPS1, chloroplastic2.8e-0732.69Show/hide
Query:  LQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGL
        L  FE++++S + +       S +L+  W+ Q +++L   H     L  +LE PV  W    VD YL+ ++ LLDL N+ S  L++L Q  LLL  AL  
Subjt:  LQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGL

Query:  IQSS
        ++++
Subjt:  IQSS

Arabidopsis top hitse value%identityAlignment
AT1G01550.1 Protein of unknown function (DUF793)2.0e-0832.69Show/hide
Query:  LQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGL
        L  FE++++S + +       S +L+  W+ Q +++L   H     L  +LE PV  W    VD YL+ ++ LLDL N+ S  L++L Q  LLL  AL  
Subjt:  LQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGL

Query:  IQSS
        ++++
Subjt:  IQSS

AT1G01550.2 Protein of unknown function (DUF793)2.0e-0832.69Show/hide
Query:  LQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGL
        L  FE++++S + +       S +L+  W+ Q +++L   H     L  +LE PV  W    VD YL+ ++ LLDL N+ S  L++L Q  LLL  AL  
Subjt:  LQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGL

Query:  IQSS
        ++++
Subjt:  IQSS

AT2G46080.1 CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511)1.9e-0632.38Show/hide
Query:  SHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHAL
        S L  FE  +   L +    + D  +L+  W+   +++L   H+    L  +L+ PV  W    VD YLN ++ LLDL N+ S  L++L Q  L L   L
Subjt:  SHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHAL

Query:  GLIQS
          +QS
Subjt:  GLIQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGATCTCAAGCTTCATCTGCTGCCTCTCATCTCCAGGCCTTCGAGTCCGACGTGTCGTCTTGCCTCATTCAATTTTCGGCCTCGAGCTCCGATTCCCGATTGCTGTCGTT
CCCATGGCTTCTCCAGCTTCTCCAGACTCTGCCCATCGTTCACCAGGCGTTTACGAAATTGGCCGTGAATTTGGAGCATCCCGTCGGACAATGGCCGCCCGATTTGGTCG
ATGGGTATCTCAATTACACCCTTAATTTGCTTGATCTTCTAAATTCTGTCAGTTTCTCGCTCTCCCAATTGGGGCAATCTCGGCTTCTTCTTTCCCACGCTCTGGGCCTA
ATTCAGAGCTCCCCTTCC
mRNA sequenceShow/hide mRNA sequence
GGATCTCAAGCTTCATCTGCTGCCTCTCATCTCCAGGCCTTCGAGTCCGACGTGTCGTCTTGCCTCATTCAATTTTCGGCCTCGAGCTCCGATTCCCGATTGCTGTCGTT
CCCATGGCTTCTCCAGCTTCTCCAGACTCTGCCCATCGTTCACCAGGCGTTTACGAAATTGGCCGTGAATTTGGAGCATCCCGTCGGACAATGGCCGCCCGATTTGGTCG
ATGGGTATCTCAATTACACCCTTAATTTGCTTGATCTTCTAAATTCTGTCAGTTTCTCGCTCTCCCAATTGGGGCAATCTCGGCTTCTTCTTTCCCACGCTCTGGGCCTA
ATTCAGAGCTCCCCTTCC
Protein sequenceShow/hide protein sequence
GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGL
IQSSPS