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MC09g0520 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0520
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box protein SKIP17-like
Genome locationMC09:4731820..4731978
RNA-Seq ExpressionMC09g0520
SyntenyMC09g0520
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575912.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]5.24e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

XP_022954019.1 F-box protein SKIP17-like isoform X1 [Cucurbita moschata]5.24e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

XP_022954022.1 F-box protein At4g02733-like isoform X2 [Cucurbita moschata]5.20e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

XP_022992510.1 F-box protein SKIP17-like isoform X1 [Cucurbita maxima]5.24e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

XP_022992515.1 F-box protein At4g02733-like isoform X2 [Cucurbita maxima]5.20e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

TrEMBL top hitse value%identityAlignment
A0A6J1D800 F-box protein SKIP17-like2.54e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

A0A6J1GPQ3 F-box protein SKIP17-like isoform X12.53e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

A0A6J1GPV7 F-box protein At4g02733-like isoform X22.52e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

A0A6J1JVX0 F-box protein At4g02733-like isoform X22.52e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

A0A6J1JZF4 F-box protein SKIP17-like isoform X12.53e-1469.81Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SLCYAT TCS+ FHKCAMDPS YAN+DLTT + RVNN VVSTMI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

SwissProt top hitse value%identityAlignment
Q0WRC9 F-box protein SKIP171.0e-0447.17Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + S+  A   C++ F+KCAMD   Y+++DLTT AR  + GVVSTMI   G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

Q9SY03 F-box protein At4g027606.0e-0547.17Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SL  A+  C++ F+KCAMD   Y+++DLTT A  V+NGVV  MI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

Arabidopsis top hitse value%identityAlignment
AT4G02740.1 F-box/RNI-like superfamily protein7.2e-0647.17Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + S+  A   C++ F+KCAMD   Y+++DLTT AR  + GVVSTMI   G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

AT4G02760.1 RNI-like superfamily protein4.2e-0647.17Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SL  A+  C++ F+KCAMD   Y+++DLTT A  V+NGVV  MI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

AT4G02760.2 RNI-like superfamily protein4.2e-0647.17Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SL  A+  C++ F+KCAMD   Y+++DLTT A  V+NGVV  MI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG

AT4G02760.3 RNI-like superfamily protein4.2e-0647.17Show/hide
Query:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG
        M+ + SL  A+  C++ F+KCAMD   Y+++DLTT A  V+NGVV  MI+  G
Subjt:  MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTTCACATAGCCTTTGCTATGCTACAACTACTTGTTCAATATGTTTTCACAAGTGTGCAATGGACCCTTCTGGCTATGCCAACGTCGACTTAACAACAGGTGC
TCGTAGAGTTAATAATGGAGTGGTGTCTACGATGATCTACCTAGTTGGT
mRNA sequenceShow/hide mRNA sequence
ATGATGATTTCACATAGCCTTTGCTATGCTACAACTACTTGTTCAATATGTTTTCACAAGTGTGCAATGGACCCTTCTGGCTATGCCAACGTCGACTTAACAACAGGTGC
TCGTAGAGTTAATAATGGAGTGGTGTCTACGATGATCTACCTAGTTGGT
Protein sequenceShow/hide protein sequence
MMISHSLCYATTTCSICFHKCAMDPSGYANVDLTTGARRVNNGVVSTMIYLVG