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MC09g0531 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0531
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTranscription factor UPBEAT1
Genome locationMC09:4832581..4832877
RNA-Seq ExpressionMC09g0531
SyntenyMC09g0531
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046707.1 transcription factor UPBEAT1 [Cucumis melo var. makuwa]2.15e-0750Show/hide
Query:  NKAKAKATIRRRSR--------RRRRSRSSG-----IEKRVSTLRSLVPNMNNNNSINCHQTSTVG-LQHLFTTTADYILLLQTRVRLMQTLLHVLSASP
        N    + T RRRSR        R RRS SS      IE+RV+ LR+LVPN  N+N  +  ++ T G L+ LFT TADYIL LQTRVRLM+TL+ VLS   
Subjt:  NKAKAKATIRRRSR--------RRRRSRSSG-----IEKRVSTLRSLVPNMNNNNSINCHQTSTVG-LQHLFTTTADYILLLQTRVRLMQTLLHVLSASP

Query:  SN
        S+
Subjt:  SN

KAG6575752.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]1.09e-0958.21Show/hide
Query:  SSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPS
        S+ I +RV+TLR+LVPNMNN+N    +  +   L+ LFT TADYIL LQTRVR M+TL+ VLS S S
Subjt:  SSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPS

KAG6593250.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]9.39e-1554.29Show/hide
Query:  EEAEDQQEEAINKAKAKATIRRRSR-----RRRRSRSSG-IEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLS
        E+ E Q+++   +A AK+  RRR       ++RRSRSS  IE+RVSTLR+LVPNMNNNN  N H++    L+ LFT TADYIL LQTRVR M+ L+ VLS
Subjt:  EEAEDQQEEAINKAKAKATIRRRSR-----RRRRSRSSG-IEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLS

Query:  ASPSN
        AS ++
Subjt:  ASPSN

KAG7025601.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.87e-1556.73Show/hide
Query:  EEAEDQQEEAINKAKAKATIRRRSR----RRRRSRSSG-IEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSA
        EE + +Q+EAI K+      RRRS     ++RRSRSS  IE+RVSTLR+LVPNMNNNN  N H++    L+ LFT TADYIL LQTRVR M+ L+ VLSA
Subjt:  EEAEDQQEEAINKAKAKATIRRRSR----RRRRSRSSG-IEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSA

Query:  SPSN
        S ++
Subjt:  SPSN

XP_031744332.1 transcription factor UPBEAT1 [Cucumis sativus]1.45e-1156.25Show/hide
Query:  IRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSN
        +++RSRR   S SS IE+RV+TLRSLVPN +N+N  +  ++    L+ LFT TADYIL LQTRVRLM+TL+ VLS   S+
Subjt:  IRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSN

TrEMBL top hitse value%identityAlignment
A0A0A0K6D9 Uncharacterized protein7.04e-1256.25Show/hide
Query:  IRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSN
        +++RSRR   S SS IE+RV+TLRSLVPN +N+N  +  ++    L+ LFT TADYIL LQTRVRLM+TL+ VLS   S+
Subjt:  IRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSN

A0A445F6P8 Transcription factor UPBEAT11.11e-0549.28Show/hide
Query:  RRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSAS
        RR   +GI +RV TL+SLVPN           + ++GL  LF  TADYIL LQTRVR+MQ ++ VL+ S
Subjt:  RRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSAS

A0A5A7TXU1 Transcription factor UPBEAT11.04e-0750Show/hide
Query:  NKAKAKATIRRRSR--------RRRRSRSSG-----IEKRVSTLRSLVPNMNNNNSINCHQTSTVG-LQHLFTTTADYILLLQTRVRLMQTLLHVLSASP
        N    + T RRRSR        R RRS SS      IE+RV+ LR+LVPN  N+N  +  ++ T G L+ LFT TADYIL LQTRVRLM+TL+ VLS   
Subjt:  NKAKAKATIRRRSR--------RRRRSRSSG-----IEKRVSTLRSLVPNMNNNNSINCHQTSTVG-LQHLFTTTADYILLLQTRVRLMQTLLHVLSASP

Query:  SN
        S+
Subjt:  SN

A0A6J5WKV7 Uncharacterized protein6.89e-0650Show/hide
Query:  RSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLS
        R RS+GI +RV TL+ L+PN +          S++GL  LF  TADYIL LQ+RVRLMQ +L  L+
Subjt:  RSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLS

I1NHA0 BHLH transcription factor1.11e-0549.28Show/hide
Query:  RRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSAS
        RR   +GI +RV TL+SLVPN           + ++GL  LF  TADYIL LQTRVR+MQ ++ VL+ S
Subjt:  RRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGAAGCAGAAGATCAACAAGAAGAAGCCATTAACAAAGCCAAAGCCAAAGCCACCATTAGAAGAAGATCAAGAAGAAGAAGAAGATCAAGATCCTCAGGAATTGAGAA
ACGGGTCAGCACATTGAGAAGCCTCGTACCAAACATGAACAACAACAACAGCATTAATTGTCATCAAACCTCCACTGTCGGATTACAACACCTCTTCACTACCACAGCCG
ATTACATATTGTTGCTGCAAACAAGAGTCAGATTGATGCAGACTTTGCTTCATGTCTTGTCTGCTTCTCCTTCTAAT
mRNA sequenceShow/hide mRNA sequence
GAAGAAGCAGAAGATCAACAAGAAGAAGCCATTAACAAAGCCAAAGCCAAAGCCACCATTAGAAGAAGATCAAGAAGAAGAAGAAGATCAAGATCCTCAGGAATTGAGAA
ACGGGTCAGCACATTGAGAAGCCTCGTACCAAACATGAACAACAACAACAGCATTAATTGTCATCAAACCTCCACTGTCGGATTACAACACCTCTTCACTACCACAGCCG
ATTACATATTGTTGCTGCAAACAAGAGTCAGATTGATGCAGACTTTGCTTCATGTCTTGTCTGCTTCTCCTTCTAAT
Protein sequenceShow/hide protein sequence
EEAEDQQEEAINKAKAKATIRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSN