; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0561 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0561
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzinc finger protein GIS3-like
Genome locationMC09:5115049..5115549
RNA-Seq ExpressionMC09g0561
SyntenyMC09g0561
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046676.1 zinc finger protein 6-like [Cucumis melo var. makuwa]4.15e-6667.74Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGT--------NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQP
        MSN NPSSILKLFGFPLV+HDD  PE  DG         NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH A ALR PPS       
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGT--------NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQP

Query:  LYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFA--AAYGSVSASSGRWIFGNSGEKGSSDHVGV---------VDLHLKLSPSS
        LYS VF  N    GGGGG G  SR LPR  NGYFA  AAYG VSASSGRW+FGNS E G  ++ G          VDLHLKLSPS+
Subjt:  LYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFA--AAYGSVSASSGRWIFGNSGEKGSSDHVGV---------VDLHLKLSPSS

KAG7025578.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.90e-6869.66Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG-----TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTA-HALRSPPSPPPP---PQ
        MSNQNPSSILKLFGFPLV+HDD+ P   DG     TNSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFH + H L +  +       P 
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG-----TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTA-HALRSPPSPPPP---PQ

Query:  PLYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGE---KGSSDHVGVVDLHLKLSPS
        P YS VF  NI    GGG  G   RFLPR  NGYF AAYG VSA SGRW+FGNSGE   KGS+D VGVVDLHLKLSPS
Subjt:  PLYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGE---KGSSDHVGVVDLHLKLSPS

XP_022154005.1 zinc finger protein GIS3-like [Momordica charantia]7.78e-11799.4Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP
        MSNQNPSSILKLFGFPLVDHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP

Query:  NIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGEKGSSDHVGVVDLHLKLSPSS
        NID VGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGEKGSSDHVGVVDLHLKLSPSS
Subjt:  NIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGEKGSSDHVGVVDLHLKLSPSS

XP_023004876.1 zinc finger protein GIS3-like [Cucurbita maxima]8.02e-6969.14Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG-----TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTA-HALRSPPSPPPPPQPLY
        MSNQNPS+ILKLFGFPLV+HDD+ P   DG     TNSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFH + H L +   PPP     Y
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG-----TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTA-HALRSPPSPPPPPQPLY

Query:  SRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGE---KGSSDHVGVVDLHLKLSPS
        S VF  +I    GGGG     RFLPR  +GYF AAYG VSA SGRW+FGNSGE   KGS+D V VVDLHLKLSPS
Subjt:  SRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGE---KGSSDHVGVVDLHLKLSPS

XP_023514545.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]3.98e-6968.72Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG-----TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHT-----AHALRSPPSPPPPP
        MSNQNPSSILKLFG PLV+HDD+ P   DG     TNSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFH      A ALR        P
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG-----TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHT-----AHALRSPPSPPPPP

Query:  QPLYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGE---KGSSDHVGVVDLHLKLSPS
         P YS VF  NI    GGGG     RF+PR  NGYF AAYG VS  SGRW+FGNSGE   KGS+D VGVVDLHLKLSPS
Subjt:  QPLYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGE---KGSSDHVGVVDLHLKLSPS

TrEMBL top hitse value%identityAlignment
A0A0A0K5R1 C2H2-type domain-containing protein2.92e-6065.59Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG------TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLY
        MSN NPSSILKLFGFPLV+HDD  PE  DG      T S+DDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH A ALR PPS       LY
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG------TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLY

Query:  SRVFAPNIDAVGGGGGVGASSRFLPRI--SNGYFA--AAYGSVSASSGRWIFGNSGEKGSSDHVGV---------VDLHLKLSPSS
        S VF  NI      GG G +SR L R   SNGYF   AAYG VSASSGRW+FGNS E G+ ++ G          VDLHLKLSPS+
Subjt:  SRVFAPNIDAVGGGGGVGASSRFLPRI--SNGYFA--AAYGSVSASSGRWIFGNSGEKGSSDHVGV---------VDLHLKLSPSS

A0A1S3BSU1 zinc finger protein 6-like3.00e-6567.2Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGT--------NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQP
        MSN NPSSILKLFGFPLV+HDD  PE  DG         NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH A ALR PPS       
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGT--------NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQP

Query:  LYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFA--AAYGSVSASSGRWIFGNSGEKGSSDHVGV---------VDLHLKLSPSS
        LYS VF  N    GGGGG    SR LPR  NGYFA  AAYG VSASSGRW+FGNS E G  ++ G          VDLHLKLSPS+
Subjt:  LYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFA--AAYGSVSASSGRWIFGNSGEKGSSDHVGV---------VDLHLKLSPSS

A0A5D3D1T3 Zinc finger protein 6-like2.01e-6667.74Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGT--------NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQP
        MSN NPSSILKLFGFPLV+HDD  PE  DG         NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH A ALR PPS       
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGT--------NSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQP

Query:  LYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFA--AAYGSVSASSGRWIFGNSGEKGSSDHVGV---------VDLHLKLSPSS
        LYS VF  N    GGGGG G  SR LPR  NGYFA  AAYG VSASSGRW+FGNS E G  ++ G          VDLHLKLSPS+
Subjt:  LYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFA--AAYGSVSASSGRWIFGNSGEKGSSDHVGV---------VDLHLKLSPSS

A0A6J1DIE9 zinc finger protein GIS3-like3.76e-11799.4Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP
        MSNQNPSSILKLFGFPLVDHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP

Query:  NIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGEKGSSDHVGVVDLHLKLSPSS
        NID VGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGEKGSSDHVGVVDLHLKLSPSS
Subjt:  NIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGEKGSSDHVGVVDLHLKLSPSS

A0A6J1KTC7 zinc finger protein GIS3-like3.88e-6969.14Show/hide
Query:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG-----TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTA-HALRSPPSPPPPPQPLY
        MSNQNPS+ILKLFGFPLV+HDD+ P   DG     TNSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFH + H L +   PPP     Y
Subjt:  MSNQNPSSILKLFGFPLVDHDDVKPERSDG-----TNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTA-HALRSPPSPPPPPQPLY

Query:  SRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGE---KGSSDHVGVVDLHLKLSPS
        S VF  +I    GGGG     RFLPR  +GYF AAYG VSA SGRW+FGNSGE   KGS+D V VVDLHLKLSPS
Subjt:  SRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGE---KGSSDHVGVVDLHLKLSPS

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 83.7e-0850.77Show/hide
Query:  DHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA-----LYFHTAH
        D D  K +  D  N +++R+F C +C R F  SQALGGHQNAHKRERQ AKR      L+ H  H
Subjt:  DHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA-----LYFHTAH

Q39265 Zinc finger protein 61.0e-1047.96Show/hide
Query:  SSILKLFGFPLVDHDDVKPERSD---GTNS-DDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP
        +S LKLFG  L++   V+ + S+   G+ S  + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA    T   L    +  P   PL S  FAP
Subjt:  SSILKLFGFPLVDHDDVKPERSD---GTNS-DDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP

Q84WI0 Zinc finger protein GIS4.8e-0844.78Show/hide
Query:  DHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPS
        + D      +D  +   +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  +  H   +P S
Subjt:  DHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPS

Q9C9H1 Zinc finger protein GIS33.5e-1132.85Show/hide
Query:  SNQNPSSILKLFGFPLVDHDD------------VKPERSD-----------------GTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL
        S++  +S LKLFGF +   +D            V PER +                 G     +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA 
Subjt:  SNQNPSSILKLFGFPLVDHDD------------VKPERSD-----------------GTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL

Query:  YFHTAHA-------------LRSP-PSPPPPPQPLYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSV--SASSGRWIFGNSGEKGSSDH-VG
           T +A             LR+P  S   PP  L S    P          +G    +LPR+S      ++G V    S G    G S E G+ D   G
Subjt:  YFHTAHA-------------LRSP-PSPPPPPQPLYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSV--SASSGRWIFGNSGEKGSSDH-VG

Query:  VVDLHLK
        VV   ++
Subjt:  VVDLHLK

Q9FG05 Zinc finger protein GIS22.8e-0840Show/hide
Query:  LKLFGFPL-VDHDDVKPERSDGTNSDD------DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFH
        ++LFGF     H++ + + +   N++       +++F+C +C R F  SQALGGHQNAHKRERQ+ KR       A +FH
Subjt:  LKLFGFPL-VDHDDVKPERSDGTNSDD------DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFH

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 75.8e-0953.7Show/hide
Query:  HDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY
        +DD K  + +     + R F C +CRR F +SQALGGHQNAHKRER  AKRA++
Subjt:  HDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALY

AT1G67030.1 zinc finger protein 67.3e-1247.96Show/hide
Query:  SSILKLFGFPLVDHDDVKPERSD---GTNS-DDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP
        +S LKLFG  L++   V+ + S+   G+ S  + RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA    T   L    +  P   PL S  FAP
Subjt:  SSILKLFGFPLVDHDDVKPERSD---GTNS-DDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAP

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein2.5e-1232.85Show/hide
Query:  SNQNPSSILKLFGFPLVDHDD------------VKPERSD-----------------GTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL
        S++  +S LKLFGF +   +D            V PER +                 G     +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA 
Subjt:  SNQNPSSILKLFGFPLVDHDD------------VKPERSD-----------------GTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL

Query:  YFHTAHA-------------LRSP-PSPPPPPQPLYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSV--SASSGRWIFGNSGEKGSSDH-VG
           T +A             LR+P  S   PP  L S    P          +G    +LPR+S      ++G V    S G    G S E G+ D   G
Subjt:  YFHTAHA-------------LRSP-PSPPPPPQPLYSRVFAPNIDAVGGGGGVGASSRFLPRISNGYFAAAYGSV--SASSGRWIFGNSGEKGSSDH-VG

Query:  VVDLHLK
        VV   ++
Subjt:  VVDLHLK

AT2G41940.1 zinc finger protein 82.6e-0950.77Show/hide
Query:  DHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA-----LYFHTAH
        D D  K +  D  N +++R+F C +C R F  SQALGGHQNAHKRERQ AKR      L+ H  H
Subjt:  DHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA-----LYFHTAH

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein3.4e-0944.78Show/hide
Query:  DHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPS
        + D      +D  +   +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  +  H   +P S
Subjt:  DHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATCAAAATCCCTCCTCCATTCTAAAGCTATTCGGGTTTCCGTTGGTGGATCACGACGACGTTAAGCCGGAGAGATCCGACGGCACCAACTCCGACGACGACAG
GAAATTCCGGTGCCAATTCTGCCGCCGCGTTTTCGCCAACTCCCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAGCGCGCCCTCTATT
TCCACACCGCCCACGCACTCCGATCGCCGCCGTCTCCGCCGCCTCCGCCGCAGCCGCTTTACTCCAGAGTGTTCGCGCCCAACATTGACGCCGTCGGCGGCGGCGGCGGG
GTTGGTGCTTCTTCTAGATTTCTGCCCCGGATCAGTAACGGCTACTTTGCGGCGGCGTACGGCAGCGTGTCGGCGTCTTCGGGGCGGTGGATATTTGGGAATTCGGGTGA
AAAGGGATCGTCAGATCATGTGGGGGTTGTTGATCTTCATCTTAAACTTTCACCGTCGTCT
mRNA sequenceShow/hide mRNA sequence
ATGTCCAATCAAAATCCCTCCTCCATTCTAAAGCTATTCGGGTTTCCGTTGGTGGATCACGACGACGTTAAGCCGGAGAGATCCGACGGCACCAACTCCGACGACGACAG
GAAATTCCGGTGCCAATTCTGCCGCCGCGTTTTCGCCAACTCCCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAGCGCGCCCTCTATT
TCCACACCGCCCACGCACTCCGATCGCCGCCGTCTCCGCCGCCTCCGCCGCAGCCGCTTTACTCCAGAGTGTTCGCGCCCAACATTGACGCCGTCGGCGGCGGCGGCGGG
GTTGGTGCTTCTTCTAGATTTCTGCCCCGGATCAGTAACGGCTACTTTGCGGCGGCGTACGGCAGCGTGTCGGCGTCTTCGGGGCGGTGGATATTTGGGAATTCGGGTGA
AAAGGGATCGTCAGATCATGTGGGGGTTGTTGATCTTCATCTTAAACTTTCACCGTCGTCT
Protein sequenceShow/hide protein sequence
MSNQNPSSILKLFGFPLVDHDDVKPERSDGTNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAPNIDAVGGGGG
VGASSRFLPRISNGYFAAAYGSVSASSGRWIFGNSGEKGSSDHVGVVDLHLKLSPSS