; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0565 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0565
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationMC09:5140763..5141206
RNA-Seq ExpressionMC09g0565
SyntenyMC09g0565
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046672.1 extensin-2 [Cucumis melo var. makuwa]3.69e-4469.13Show/hide
Query:  FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPP--VVDCPPPPPPPPPP-----LPTSECPPPPPSPPPPSCDACVYPSPPPPAN--------GGQF
        FSL+S A +AVAKDQ+ CSMCS+CDNPCQ+PPPPPP  VV+CPPPP PPPPP     LPTS+CPPP   P PPSCDACVYPSPPPP++        GGQF
Subjt:  FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPP--VVDCPPPPPPPPPP-----LPTSECPPPPPSPPPPSCDACVYPSPPPPAN--------GGQF

Query:  PGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLG-LLIILC
        PGIA  PPPPNPILPYFPYYY +PPSAS  SV  S K+L L  L+IILC
Subjt:  PGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLG-LLIILC

KAG6575794.1 hypothetical protein SDJN03_26433, partial [Cucurbita argyrosperma subsp. sororia]6.11e-4163.16Show/hide
Query:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPP-------LPTSECPPPPPSPPPPSCDACVYPSPP
        MA   SI +++ + + S  SP+ A V A+DQ+ CSMC+SCDNPCQ+PPPPP +VDCPPPP PPPPP       LPT ECPPP   P PPSCDACVYPSPP
Subjt:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPP-------LPTSECPPPPPSPPPPSCDACVYPSPP

Query:  PP---ANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL
        PP    +GGQ+PG  LAPPPPNPILPYFPYYY  PPS S  SV  S K L L
Subjt:  PP---ANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL

XP_022991777.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]2.35e-4162.58Show/hide
Query:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPP-----VVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP
        MA   SI +++ +F+ S  S ++A V A+DQ+ CSMCSSCDNPCQ+PPPPPP     VVDCPPPP PPPPPLP  ECPPP   P PPSCDACVYPSPPPP
Subjt:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPP-----VVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP

Query:  AN--------GGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL
        ++        GGQ+PG+A  PPPPNPILPYFPYYY  PPS S  SV  S K L L
Subjt:  AN--------GGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL

XP_023004682.1 glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like [Cucurbita maxima]7.85e-4261.25Show/hide
Query:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP---
        MA+ +SI  + ++FT   FS +S A  AVAKDQ+ CSMCSSCDNPCQ+PPPPPP               PTS+CPPPPP PPPPSC  CV+PSP PP   
Subjt:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP---

Query:  -----ANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL
             A+GGQFPG+A  PPPPNPILPY+PYYY +PP+AS  SVSIS KIL LGLLII+CL
Subjt:  -----ANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL

XP_023514546.1 leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]1.17e-4063.38Show/hide
Query:  FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP--------ANGGQFPGIALAP
        FS +S A  AVAKDQ+ CSMCSSCDNPCQ+PPPPPP               PTS+CPPP   PPPPSC  C++PSP PP        A+GGQFPG  LAP
Subjt:  FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP--------ANGGQFPGIALAP

Query:  PPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL
        PPPNPILPY+PYYY +PP+AS  SVSIS KIL LGLLII+CL
Subjt:  PPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL

TrEMBL top hitse value%identityAlignment
A0A0A0K5N4 Uncharacterized protein2.46e-4469.39Show/hide
Query:  FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPP--VVDCPPPPPPPPPP-----LPTSECPPPPPSPPPPSCDACVYPSPPPPAN--------GGQF
        FSL+S A  AVAKDQ+ CSMCS+CDNPCQ+PPPPPP  VV+CPPPPP PPPP     LPTS+CPPP   P PPSCDACVYPSPPPP++        GGQF
Subjt:  FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPP--VVDCPPPPPPPPPP-----LPTSECPPPPPSPPPPSCDACVYPSPPPPAN--------GGQF

Query:  PGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL
        PGIA  PPPPNPILPYFPYYY +PPSAS  SV  S K L L  LIIL
Subjt:  PGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL

A0A5D3D2P5 Extensin-21.79e-4469.13Show/hide
Query:  FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPP--VVDCPPPPPPPPPP-----LPTSECPPPPPSPPPPSCDACVYPSPPPPAN--------GGQF
        FSL+S A +AVAKDQ+ CSMCS+CDNPCQ+PPPPPP  VV+CPPPP PPPPP     LPTS+CPPP   P PPSCDACVYPSPPPP++        GGQF
Subjt:  FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPP--VVDCPPPPPPPPPP-----LPTSECPPPPPSPPPPSCDACVYPSPPPPAN--------GGQF

Query:  PGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLG-LLIILC
        PGIA  PPPPNPILPYFPYYY +PPSAS  SV  S K+L L  L+IILC
Subjt:  PGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLG-LLIILC

A0A6J1H7D0 glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like1.44e-3959.38Show/hide
Query:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP---
        MA+ +SI  + ++FT   FS +S A  AVAKDQ+ CSMCSSCDNPCQ+PPPPPP            PP PTS+CPPP   PPPPSC  C++PSP PP   
Subjt:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP---

Query:  -----ANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL
             A+G QFPG+A  PPPPNPILPY+PYYY +PP+AS   VSIS KIL LGLLII+CL
Subjt:  -----ANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL

A0A6J1JMT5 leucine-rich repeat extensin-like protein 31.14e-4162.58Show/hide
Query:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPP-----VVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP
        MA   SI +++ +F+ S  S ++A V A+DQ+ CSMCSSCDNPCQ+PPPPPP     VVDCPPPP PPPPPLP  ECPPP   P PPSCDACVYPSPPPP
Subjt:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPP-----VVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP

Query:  AN--------GGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL
        ++        GGQ+PG+A  PPPPNPILPYFPYYY  PPS S  SV  S K L L
Subjt:  AN--------GGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL

A0A6J1KR41 glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like3.80e-4261.25Show/hide
Query:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP---
        MA+ +SI  + ++FT   FS +S A  AVAKDQ+ CSMCSSCDNPCQ+PPPPPP               PTS+CPPPPP PPPPSC  CV+PSP PP   
Subjt:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP---

Query:  -----ANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL
             A+GGQFPG+A  PPPPNPILPY+PYYY +PP+AS  SVSIS KIL LGLLII+CL
Subjt:  -----ANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16140.1 proline-rich family protein2.8e-0741.98Show/hide
Query:  HFISIAISIIFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLP-TSECPPPPPSP--------PPPSCDACVYPSP---
        H         FT +L SP+  A       C+MC+SCDNPCQ  P PPP    PP  P PPPP P T+ CPPPP S         PP S      P P   
Subjt:  HFISIAISIIFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLP-TSECPPPPPSP--------PPPSCDACVYPSP---

Query:  ------PPPANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL
              PPP +GG +P      PPPNPI+PYFP+YY NPP  S  S S +      G+  IL
Subjt:  ------PPPANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL

AT5G49280.1 hydroxyproline-rich glycoprotein family protein7.2e-1140.88Show/hide
Query:  ISIIFTFSLISPAMAAVAKDQ-LTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSP----------PPPSCDACVYPSPPPPANGG
        +S +    L+S      +KD+ ++C+MCSSCDNPC       PV   PPPP PPPP  PT+ CPPPP  P          PPPS        PPP   GG
Subjt:  ISIIFTFSLISPAMAAVAKDQ-LTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSP----------PPPSCDACVYPSPPPPANGG

Query:  Q-------FPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLL-IILCL
        Q       + G    PPPPNPI+PYFP+YY  PP  S +   +S   +   L  + LCL
Subjt:  Q-------FPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLL-IILCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCATTTCATCTCCATCGCCATCTCCATCATTTTCACTTTTTCCTTAATTTCGCCTGCAATGGCCGCCGTCGCCAAGGATCAACTCACCTGTTCCATGTGCTCAAG
TTGCGACAATCCCTGCCAAATTCCGCCGCCGCCTCCGCCGGTCGTTGACTGCCCTCCTCCTCCACCGCCTCCTCCGCCGCCGCTCCCCACTTCCGAATGCCCCCCTCCTC
CCCCTTCTCCGCCGCCCCCCTCCTGCGACGCCTGCGTCTACCCTTCCCCGCCGCCGCCGGCCAACGGCGGGCAGTTTCCCGGGATTGCCCTTGCCCCGCCGCCGCCGAAC
CCAATTTTGCCGTATTTTCCTTACTATTATCTGAATCCCCCTTCGGCTTCTGCCAATTCCGTCTCGATTTCATTGAAGATTCTGCGTTTGGGTTTATTAATCATTCTCTG
CCTC
mRNA sequenceShow/hide mRNA sequence
ATGGCCCATTTCATCTCCATCGCCATCTCCATCATTTTCACTTTTTCCTTAATTTCGCCTGCAATGGCCGCCGTCGCCAAGGATCAACTCACCTGTTCCATGTGCTCAAG
TTGCGACAATCCCTGCCAAATTCCGCCGCCGCCTCCGCCGGTCGTTGACTGCCCTCCTCCTCCACCGCCTCCTCCGCCGCCGCTCCCCACTTCCGAATGCCCCCCTCCTC
CCCCTTCTCCGCCGCCCCCCTCCTGCGACGCCTGCGTCTACCCTTCCCCGCCGCCGCCGGCCAACGGCGGGCAGTTTCCCGGGATTGCCCTTGCCCCGCCGCCGCCGAAC
CCAATTTTGCCGTATTTTCCTTACTATTATCTGAATCCCCCTTCGGCTTCTGCCAATTCCGTCTCGATTTCATTGAAGATTCTGCGTTTGGGTTTATTAATCATTCTCTG
CCTC
Protein sequenceShow/hide protein sequence
MAHFISIAISIIFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPPANGGQFPGIALAPPPPN
PILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL