; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0589 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0589
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic
Genome locationMC09:5417328..5417867
RNA-Seq ExpressionMC09g0589
SyntenyMC09g0589
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003425 - CCB3/YggT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067975.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa]2.70e-9684.44Show/hide
Query:  QRGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAF
        QRGFK+HPQRNPNY+FQA++CSSSLLGS  TSSK+   LA   PPLKPAAA+E  RT PFALQDASMAASDF  +M LADLDP TAKLAI FLGP LS F
Subjt:  QRGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAF

Query:  SFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        SFLFI RIVMSWYPKLPVGKFPYV+AYAPTEPLLI TRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  SFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

XP_008451549.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic [Cucumis melo]8.07e-9684.36Show/hide
Query:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
        RGFK+HPQRNPNY+FQA++CSSSLLGS  TSSK+   LA   PPLKPAAA+E  RT PFALQDASMAASDF  +M LADLDP TAKLAI FLGP LS FS
Subjt:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS

Query:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFI RIVMSWYPKLPVGKFPYV+AYAPTEPLLI TRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

XP_022144899.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 [Momordica charantia]5.02e-116100Show/hide
Query:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
        RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
Subjt:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS

Query:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
        FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
Subjt:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ

XP_022144908.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 [Momordica charantia]4.84e-116100Show/hide
Query:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
        RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
Subjt:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS

Query:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
        FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
Subjt:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ

XP_022144916.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X3 [Momordica charantia]1.92e-117100Show/hide
Query:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
        RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
Subjt:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS

Query:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

TrEMBL top hitse value%identityAlignment
A0A1S3BSI7 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic3.91e-9684.36Show/hide
Query:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
        RGFK+HPQRNPNY+FQA++CSSSLLGS  TSSK+   LA   PPLKPAAA+E  RT PFALQDASMAASDF  +M LADLDP TAKLAI FLGP LS FS
Subjt:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS

Query:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFI RIVMSWYPKLPVGKFPYV+AYAPTEPLLI TRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A5A7VQJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB31.31e-9684.44Show/hide
Query:  QRGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAF
        QRGFK+HPQRNPNY+FQA++CSSSLLGS  TSSK+   LA   PPLKPAAA+E  RT PFALQDASMAASDF  +M LADLDP TAKLAI FLGP LS F
Subjt:  QRGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAF

Query:  SFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        SFLFI RIVMSWYPKLPVGKFPYV+AYAPTEPLLI TRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  SFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

A0A6J1CTL8 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X12.43e-116100Show/hide
Query:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
        RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
Subjt:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS

Query:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
        FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
Subjt:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ

A0A6J1CUI3 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X22.35e-116100Show/hide
Query:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
        RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
Subjt:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS

Query:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
        FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
Subjt:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ

A0A6J1CUU2 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X39.28e-118100Show/hide
Query:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
        RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS
Subjt:  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFS

Query:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
        FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Subjt:  FLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS

SwissProt top hitse value%identityAlignment
Q8RWM7 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic5.8e-4474.6Show/hide
Query:  EGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPV
        E   TT    Q  S+  S+  +N++LADLDP TAKLAIG LGP LSAF FLFI+RIVMSWYPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPV
Subjt:  EGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPV

Query:  VWFGLVSFLNEILLGPQGLLVLLSQQ
        VWFGLVSFL+EIL+GPQGLLVL+SQQ
Subjt:  VWFGLVSFLNEILLGPQGLLVLLSQQ

Arabidopsis top hitse value%identityAlignment
AT3G07430.1 YGGT family protein4.6e-0425.48Show/hide
Query:  SSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTP-------FALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYP
        SS+L GST + + +A L  + T  L    +     ++P       F+L  A        ++     L+     +A+G +  +L  +S + +VR+++SW+P
Subjt:  SSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTP-------FALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYP

Query:  KLPVGKFPYVVAYAPTEPLLIVTRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG
         +P  + P        +P L + R +IPP+   +DV+P++ F ++  L  I+ G  G
Subjt:  KLPVGKFPYVVAYAPTEPLLIVTRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG

AT4G27990.1 YGGT family protein2.1e-0430.38Show/hide
Query:  LGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG
        L  +L  +S + +VR+++SW+P +P  + P        +P L + R +IPP+   +DV+P++ F ++  L  IL   +G
Subjt:  LGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG

AT5G21920.1 YGGT family protein2.1e-0437.1Show/hide
Query:  FLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPT--EPLLIVTRKVIPPLGGVDVTPVVWF
        FL+ ++ + +VR+V++W+P  P    P +V    T  +P L + R  IPPLGG+D++P++ F
Subjt:  FLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPT--EPLLIVTRKVIPPLGGVDVTPVVWF

AT5G21920.2 YGGT family protein3.5e-0429.85Show/hide
Query:  SLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKFPY
        SL+ +T         LAS  P  + A     T    FA+ +   AA        L     A   +A G +  FL+ ++ + +VR+V++W+P  P    P 
Subjt:  SLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKFPY

Query:  VVAYAPT--EPLLIVTRKVIPPLGGVDVTPVVWF
        +V    T  +P L + R  IPPLGG+D++P++ F
Subjt:  VVAYAPT--EPLLIVTRKVIPPLGGVDVTPVVWF

AT5G36120.1 cofactor assembly, complex C (B6F)4.1e-4574.6Show/hide
Query:  EGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPV
        E   TT    Q  S+  S+  +N++LADLDP TAKLAIG LGP LSAF FLFI+RIVMSWYPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPV
Subjt:  EGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPV

Query:  VWFGLVSFLNEILLGPQGLLVLLSQQ
        VWFGLVSFL+EIL+GPQGLLVL+SQQ
Subjt:  VWFGLVSFLNEILLGPQGLLVLLSQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGAGAGGCTTTAAGCACCATCCTCAAAGAAATCCAAACTACAGATTCCAGGCGCTCCAGTGTAGCTCATCCTTATTGGGTTCTACTGTTACCTCTTCCAAGGTTGCTCT
GTTATTAGCCTCTGCCACCCCTCCATTAAAGCCAGCTGCTGCATTTGAAGGTACAAGAACTACCCCCTTTGCCCTGCAAGATGCATCAATGGCTGCCTCTGATTTCACGA
AAAACATGGCCCTGGCCGACCTCGACCCAGCAACGGCAAAGCTCGCAATCGGCTTTCTGGGTCCGTTTCTCTCGGCATTTTCGTTTTTGTTTATTGTGAGAATAGTGATG
TCTTGGTATCCAAAGTTACCTGTGGGGAAGTTTCCATATGTTGTAGCTTATGCTCCAACTGAACCACTTCTAATTGTGACAAGGAAGGTGATTCCCCCTCTTGGCGGAGT
TGACGTAACGCCTGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGACTGCTTGTTCTTCTTTCTCAACAGGTCAGC
mRNA sequenceShow/hide mRNA sequence
CAGAGAGGCTTTAAGCACCATCCTCAAAGAAATCCAAACTACAGATTCCAGGCGCTCCAGTGTAGCTCATCCTTATTGGGTTCTACTGTTACCTCTTCCAAGGTTGCTCT
GTTATTAGCCTCTGCCACCCCTCCATTAAAGCCAGCTGCTGCATTTGAAGGTACAAGAACTACCCCCTTTGCCCTGCAAGATGCATCAATGGCTGCCTCTGATTTCACGA
AAAACATGGCCCTGGCCGACCTCGACCCAGCAACGGCAAAGCTCGCAATCGGCTTTCTGGGTCCGTTTCTCTCGGCATTTTCGTTTTTGTTTATTGTGAGAATAGTGATG
TCTTGGTATCCAAAGTTACCTGTGGGGAAGTTTCCATATGTTGTAGCTTATGCTCCAACTGAACCACTTCTAATTGTGACAAGGAAGGTGATTCCCCCTCTTGGCGGAGT
TGACGTAACGCCTGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGACTGCTTGTTCTTCTTTCTCAACAGGTCAGC
Protein sequenceShow/hide protein sequence
QRGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVM
SWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS