CuGenDBv2

Gene ID	MC09g0610
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Nucleolar protein 16
Genome location	MC09:5567646..5569378
RNA-Seq Expression	MC09g0610
Synteny	MC09g0610
Gene Ontology terms	GO:0042273 - ribosomal large subunit biogenesis (biological process) GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR019002 - Ribosome biogenesis protein Nop16

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7014368.1 hypothetical protein SDJN02_24545, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.30e-118

90.21

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYK+SR KV+VGLPKRNP VFKPSFCMPPKLRSLLAEQFEE P WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESD LQVPP SL PS D
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLD SGSD EEDDLK+ALGKKR+ GKS PLKPLTT+QRVHVGRLIEKYGDD+ERMFMDTKLNSMQHSVATLEKLCKRYHSC DKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

XP_022151256.1 nucleolar protein 16 [Momordica charantia]

3.07e-136

100

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

XP_022954094.1 uncharacterized protein LOC111456462 [Cucurbita moschata]

3.53e-119

90.72

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYK+SR KV+VGLPKRNP VFKPSFCMPPKLRSLLAEQFEE P WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESD LQVPP SL PS D
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLD SGSD EEDDLK+ALGKKR+DGKS PLKPLTT+QRVHVGRLIEKYGDD+ERMFMDTKLNSMQHSVATLEKLCKRYHSC DKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

XP_022991747.1 uncharacterized protein LOC111488281 [Cucurbita maxima]

1.50e-120

91.75

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYK+SR KV+VGLPKRNP VFKPSFCMPPKLRSLLAEQFEE P WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPP SL PS D
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLD SGSD EEDDLK+ALGKKRKDGKS PLKPLTT+QRVHVGRLIEKYGDD+ERMFMDTKLNSMQHSVATLEKLCKRYHSC DKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

XP_023547523.1 uncharacterized protein LOC111806441 [Cucurbita pepo subsp. pepo]

8.66e-120

91.24

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYK+SR KV+VGLPKRNP VFKPSFCMPPKLRSLLAEQFEE P WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPP SL PS D
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLD SGSD EEDDLK+ALGKKRKDGKS PLKPLTT+QRVHVGRLIEKYGDD+ERMFMDTKLNSMQHSVATLEKLCKRYH C DKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BSM4 Nucleolar protein 16

6.00e-117

88.66

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYKKSRPKV+VGLPKRNP VFKPSFCMPPKLRSLLAEQFEE P WDEK SVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQVPP     S D
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLD SGSD EEDDLK+ALGKKRKDGKS PL+PLTT+QRVHVG+LIEKYGDDY+RMFMDTKLNSMQHSVATLEKLCKRYHSC DKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

A0A5A7VLA5 Nucleolar protein 16

6.00e-117

88.66

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYKKSRPKV+VGLPKRNP VFKPSFCMPPKLRSLLAEQFEE P WDEK SVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQVPP     S D
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLD SGSD EEDDLK+ALGKKRKDGKS PL+PLTT+QRVHVG+LIEKYGDDY+RMFMDTKLNSMQHSVATLEKLCKRYHSC DKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

A0A6J1DE29 Nucleolar protein 16

1.49e-136

100

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

A0A6J1GRW5 Nucleolar protein 16

1.71e-119

90.72

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYK+SR KV+VGLPKRNP VFKPSFCMPPKLRSLLAEQFEE P WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESD LQVPP SL PS D
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLD SGSD EEDDLK+ALGKKR+DGKS PLKPLTT+QRVHVGRLIEKYGDD+ERMFMDTKLNSMQHSVATLEKLCKRYHSC DKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

A0A6J1JMQ4 Nucleolar protein 16

7.25e-121

91.75

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        MGRSRRKYK+SR KV+VGLPKRNP VFKPSFCMPPKLRSLLAEQFEE P WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPP SL PS D
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR
        PDSVLD SGSD EEDDLK+ALGKKRKDGKS PLKPLTT+QRVHVGRLIEKYGDD+ERMFMDTKLNSMQHSVATLEKLCKRYHSC DKNPLILTR
Subjt:  PDSVLDPSGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G02870.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome biogenesis protein Nop16 (InterPro:IPR019002); Has 104 Blast hits to 104 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

1.7e-65

62.76

Show/hide

Query:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD
        M RSRRKY+ SR KVRV LPK+NP +FKP+F  PPKLR+L+    ++ P WD++ASVI NYKSFGV+SNPNLL +R+RTDH+++ DSL VPPP   P+ D
Subjt:  MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGD

Query:  P-DSVLDP--SGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILT
        P     +P  SGS+ EEDDLK+ALGK+RKDGKS PL+PLTT+QR H+ RL+EK+GDD E M+ D KLNSMQHSVATL KLC RY    DKNP++++
Subjt:  P-DSVLDP--SGSDAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAAGATCTCGCAGAAAGTACAAGAAATCTCGGCCAAAAGTCAGGGTCGGCCTTCCGAAGAGGAATCCCCAGGTTTTCAAGCCCTCCTTCTGCATGCCGCCCAAGCT
CCGCTCCTTGCTCGCCGAACAATTTGAAGAACATCCCATCTGGGACGAAAAAGCCAGTGTAATTCACAATTACAAGTCCTTCGGCGTTCTTTCTAACCCCAATTTGCTCA
GCGTTCGCTCCCGCACCGATCATATCGTCGAGAGCGACTCTCTCCAGGTTCCGCCGCCGTCTCTGCTGCCTTCCGGTGACCCTGATTCCGTTCTCGATCCCTCCGGTAGC
GATGCGGAGGAGGACGATTTGAAATCAGCACTGGGAAAGAAGCGGAAAGATGGGAAATCTGGGCCTCTAAAACCGTTGACCACGGTTCAGCGCGTTCATGTTGGTAGGCT
AATTGAGAAATATGGAGACGATTACGAGAGGATGTTCATGGATACAAAGCTGAACTCGATGCAGCATTCTGTTGCTACTCTGGAGAAACTTTGCAAAAGATATCACTCTT
GTCCAGATAAGAATCCGTTGATATTGACCCGTTAG

mRNA sequence

Show/hide mRNA sequence

CTTTGAATCAGAGCAATCCATCGGAACAATCCAGTAACTCAGAGAACAGTTGAGTTGTACTTACTTACTTATTACGACTAAGTCAAGTCAAGTCAAAGGGTGGCACTCTT
TCTCGGAGTTGCTGGTCCGAGCTATCTTAAAGTTTAAAAAAATAAAAAATAAAAACGGGTGAAGGAGAGGGAGGGAGGAAGAAGAAGAGAGGGGTATAATTGTCATTTTG
CCTTATATTTTAAAATTTATGGGTATTGTTCTTGAGTTTGGCATCCTAAATTCTAATAAACCCTAGCCAGCCTCCGGTCTCGCGTTCTCGTTCGATTCACAGAACCAGAG
AGAAGAAGATATGGGAAGATCTCGCAGAAAGTACAAGAAATCTCGGCCAAAAGTCAGGGTCGGCCTTCCGAAGAGGAATCCCCAGGTTTTCAAGCCCTCCTTCTGCATGC
CGCCCAAGCTCCGCTCCTTGCTCGCCGAACAATTTGAAGAACATCCCATCTGGGACGAAAAAGCCAGTGTAATTCACAATTACAAGTCCTTCGGCGTTCTTTCTAACCCC
AATTTGCTCAGCGTTCGCTCCCGCACCGATCATATCGTCGAGAGCGACTCTCTCCAGGTTCCGCCGCCGTCTCTGCTGCCTTCCGGTGACCCTGATTCCGTTCTCGATCC
CTCCGGTAGCGATGCGGAGGAGGACGATTTGAAATCAGCACTGGGAAAGAAGCGGAAAGATGGGAAATCTGGGCCTCTAAAACCGTTGACCACGGTTCAGCGCGTTCATG
TTGGTAGGCTAATTGAGAAATATGGAGACGATTACGAGAGGATGTTCATGGATACAAAGCTGAACTCGATGCAGCATTCTGTTGCTACTCTGGAGAAACTTTGCAAAAGA
TATCACTCTTGTCCAGATAAGAATCCGTTGATATTGACCCGTTAGCGATATTATCGAGCGCTTCCCCAACCATTTTTCAAATTGTTTTGTCACAAGAGGTAAAGTCGGAG
AAGGTATGATCAAGAAATCTAATTGAATTGAGCAATGTTGTTTGAACCCAAATGTATGAGGCTTGAAAGATGGCTCATTCTCTAGCTTGATTCAGTTTATTTCAAGGAAA
TGATCATAATTCTAGCCCAAGTTTAGTTAGTGATAGCATCTATGGCATCTTCATTTTAGGGAGACTGCAAGAATTTCAGGTTGTATGCATTGGCTTATAACCTAAATGCA
TTTTTGATATGTTTAAAGCCATGGGGTTTATGTTTGAATTTATTTATAAATGAACTTCACCCCTTTATAAAAACGGTTGTTTC

Protein sequence

Show/hide protein sequence

MGRSRRKYKKSRPKVRVGLPKRNPQVFKPSFCMPPKLRSLLAEQFEEHPIWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPPSLLPSGDPDSVLDPSGS
DAEEDDLKSALGKKRKDGKSGPLKPLTTVQRVHVGRLIEKYGDDYERMFMDTKLNSMQHSVATLEKLCKRYHSCPDKNPLILTR

MC09g0610 (gene) of Bitter gourd (Dali-11) v1 genome