CuGenDBv2

Gene ID	MC09g0636
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Amino acid transporter AVT1A
Genome location	MC09:5804963..5805157
RNA-Seq Expression	MC09g0636
Synteny	MC09g0636
Gene Ontology terms	GO:0006865 - amino acid transport (biological process) GO:0009734 - auxin-activated signaling pathway (biological process) GO:0055085 - transmembrane transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0015293 - symporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

CBI30124.3 unnamed protein product, partial [Vitis vinifera]

7.46e-16

69.35

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Query:  MNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        MNPLARSIEELLP RI +S WCFILLRT L        C+AF LPFFGLVM+LI S LS+LV
Subjt:  MNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

KAG6596171.1 Amino acid transporter AVT1A, partial [Cucurbita argyrosperma subsp. sororia]

1.91e-16

71.43

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSIL
        +LMNPLARSIEELLP RI +S WCFILLRT L        C+AF LPFFGLVMALI S LSIL
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSIL

KGN59445.1 hypothetical protein Csa_000748 [Cucumis sativus]

5.44e-16

70.31

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        +LMNPLARSIEELLPPRI  S+ CFILLRT L        C+AF LPFFGLVM+LI S LSILV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

XP_010554769.1 PREDICTED: vacuolar amino acid transporter 1 [Tarenaya hassleriana]

1.10e-15

71.88

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        +LMNPLARSIEELLP RI DS WCF+LLRT L        C+AF LPFFGLVMALI S LSILV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

XP_022147778.1 amino acid transporter AVT1A-like isoform X1 [Momordica charantia]

3.54e-17

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        +LMNPLARSIEELLP RI DS+WCFILLRTTL     +   +AF LPFFGLVMALI SFLSILV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBQ3 Aa_trans domain-containing protein

2.63e-16

70.31

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        +LMNPLARSIEELLPPRI  S+ CFILLRT L        C+AF LPFFGLVM+LI S LSILV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

A0A0B2RTR3 Vacuolar amino acid transporter 1

1.87e-15

68.75

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        +LMNPLARS+EELLP RI  S+WCFILLRTTL        C+AF +PFFGLVMALI S  SILV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

A0A2R6QVF0 Vacuolar amino acid transporter like

1.36e-15

70.31

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        +LMNPLAR IEELLP R+ +S WCFILLRT L        C+AF LPFFGLVMALI SFLSILV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

A0A371EUW6 Amino acid transporter AVT1A (Fragment)

1.87e-15

66.15

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILVV
        +LMNPLARS++ELLP RI  ++WCFIL+RT L        C+AF +PFFGLVMALI SFLSILVV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILVV

A0A6J1D210 amino acid transporter AVT1A-like isoform X1

1.72e-17

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        +LMNPLARSIEELLP RI DS+WCFILLRTTL     +   +AF LPFFGLVMALI SFLSILV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

SwissProt top hits

e value

%identity

Alignment

F4IUW3 Amino acid transporter AVT1C

5.6e-05

43.75

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        + ++P+A S+EEL+P R + SHW  I +RT L         +   +PFFGLVM+LI S L++LV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

O80668 Amino acid transporter AVT1A

4.7e-12

64.06

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        +LMNPLARSIEELLP R+ ++ WCF+LLRT L        C AF +PFFGL+MALI S LSILV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

Arabidopsis top hits

e value

%identity

Alignment

AT2G39130.1 Transmembrane amino acid transporter family protein

4.0e-06

43.75

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        + ++P+A S+EEL+P R + SHW  I +RT L         +   +PFFGLVM+LI S L++LV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

AT2G41190.1 Transmembrane amino acid transporter family protein

3.4e-13

64.06

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV
        +LMNPLARSIEELLP R+ ++ WCF+LLRT L        C AF +PFFGL+MALI S LSILV
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILV

Sequences

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CDS sequence

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ATGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTACCACCTAGAATTTTAGATAGCCACTGGTGTTTCATTCTTCTAAGAACAACACTAGAACACCACTTTTG
TTACTTCTACTGCATAGCTTTCCCTCTGCCCTTTTTTGGTCTTGTGATGGCTTTAATTGACTCATTTCTAAGCATACTCGTGGTG

mRNA sequence

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ATGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTACCACCTAGAATTTTAGATAGCCACTGGTGTTTCATTCTTCTAAGAACAACACTAGAACACCACTTTTG
TTACTTCTACTGCATAGCTTTCCCTCTGCCCTTTTTTGGTCTTGTGATGGCTTTAATTGACTCATTTCTAAGCATACTCGTGGTG

Protein sequence

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MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCYFYCIAFPLPFFGLVMALIDSFLSILVV

MC09g0636 (gene) of Bitter gourd (Dali-11) v1 genome