CuGenDBv2

Gene ID	MC09g0661
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	classical arabinogalactan protein 26
Genome location	MC09:6028797..6029174
RNA-Seq Expression	MC09g0661
Synteny	MC09g0661
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039346 - Classical arabinogalactan protein 25/26

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575865.1 hypothetical protein SDJN03_26504, partial [Cucurbita argyrosperma subsp. sororia]

4.63e-50

73.68

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ
        FSLY PIFMAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+PLPPSQ
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ

Query:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        SLP SAAA LNSGGW   + V LTAA  AEV R
Subjt:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR

XP_022953817.1 classical arabinogalactan protein 26 [Cucurbita moschata]

1.32e-49

72.93

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ
        FSLY PIFMAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DI+PLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+PLPPSQ
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ

Query:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        SLP SAAA LNSGGW   + V LTAA  AEV R
Subjt:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR

XP_022991733.1 classical arabinogalactan protein 26 [Cucurbita maxima]

1.08e-48

72.18

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ
        FSLY PIFMAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  + PAPE+PLPPSQ
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ

Query:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        SLP SAAA LNSGGW   + V LTAA   EV R
Subjt:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR

XP_023548939.1 classical arabinogalactan protein 26-like [Cucurbita pepo subsp. pepo]

1.88e-49

72.93

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ
        FSLY PIFMAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+PLPPSQ
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ

Query:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        SLP SA A LNSGGW   + V LTAA  AEV R
Subjt:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR

XP_038876736.1 classical arabinogalactan protein 26-like [Benincasa hispida]

8.98e-46

70.37

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP------DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPP
        FSLY PIFMAY+AS+   +LASYPNY P  ISSISAAPEFSP P+P      DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+ LPP
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP------DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPP

Query:  SQSLPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        SQSLP SAA +LN  GW  PVLV LT A A E+ R
Subjt:  SQSLPISAAAALNSGGWYRPVLVILTAAFAAEVGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K510 Uncharacterized protein

5.34e-44

71.21

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPS-ISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQS
        FSLY PIFMAY+AS+   + ASYPN FP   ISSISAAPEFSP+PAP  DISPLFPTPG A LPP  SS PTIPSSPSPPNPDF  +APAPE+PL PSQS
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPS-ISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQS

Query:  LPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        LP S AAALNSGGW   V V LT    AE+ R
Subjt:  LPISAAAALNSGGWYRPVLVILTAAFAAEVGR

A0A1S3BRG9 classical arabinogalactan protein 26

7.88e-42

68.89

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPS----ISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPP
        FSLY PIFMAY+AS    A ASYPNYFP       SSISAAPEFSPAPAP  DISPLFPTPG A LPP  SS PTIPSSPSPPNPDF   APAPE+PL P
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPS----ISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPP

Query:  SQSLPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        + S+P SAAAALNS GW   V + L  A AAE+ R
Subjt:  SQSLPISAAAALNSGGWYRPVLVILTAAFAAEVGR

A0A5A7UQZ3 Classical arabinogalactan protein 26

7.88e-42

68.89

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPS----ISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPP
        FSLY PIFMAY+AS    A ASYPNYFP       SSISAAPEFSPAPAP  DISPLFPTPG A LPP  SS PTIPSSPSPPNPDF   APAPE+PL P
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPS----ISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPP

Query:  SQSLPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        + S+P SAAAALNS GW   V + L  A AAE+ R
Subjt:  SQSLPISAAAALNSGGWYRPVLVILTAAFAAEVGR

A0A6J1GPB2 classical arabinogalactan protein 26

6.41e-50

72.93

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ
        FSLY PIFMAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DI+PLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+PLPPSQ
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ

Query:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        SLP SAAA LNSGGW   + V LTAA  AEV R
Subjt:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR

A0A6J1JX46 classical arabinogalactan protein 26

5.25e-49

72.18

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Query:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ
        FSLY PIFMAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  + PAPE+PLPPSQ
Subjt:  FSLYFPIFMAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQ

Query:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR
        SLP SAAA LNSGGW   + V LTAA   EV R
Subjt:  SLPISAAAALNSGGWYRPVLVILTAAFAAEVGR

SwissProt top hits

e value

%identity

Alignment

Q94F57 Classical arabinogalactan protein 26

2.2e-05

40.74

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Query:  LASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSS---FPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYRPVL
        +++ P++ P + SS SA+   +PA +PD SPLFPTPG + + P+ S     PTIPSS SPPNPD     P  E+  P    LP S++  L S      +L
Subjt:  LASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSS---FPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYRPVL

Query:  VILTAAFA
        V+L    A
Subjt:  VILTAAFA

Arabidopsis top hits

e value

%identity

Alignment

AT2G47930.1 arabinogalactan protein 26

1.6e-06

40.74

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Query:  LASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSS---FPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYRPVL
        +++ P++ P + SS SA+   +PA +PD SPLFPTPG + + P+ S     PTIPSS SPPNPD     P  E+  P    LP S++  L S      +L
Subjt:  LASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSS---FPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYRPVL

Query:  VILTAAFA
        V+L    A
Subjt:  VILTAAFA

Sequences

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CDS sequence

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TTCTCTCTCTACTTCCCCATTTTCATGGCCTACTCGGCTTCTCTCGCTCTCGCTTCTTATCCAAATTACTTCCCTCCTTCAATTTCTTCCATTTCCGCCGCGCCGGAGTT
TTCGCCGGCGCCGGCGCCGGACATTTCTCCGCTGTTTCCGACCCCCGGAGGCGCCGCACTTCCGCCGGCCGATTCCTCGTTTCCGACCATTCCTTCGAGTCCCAGCCCGC
CCAACCCGGATTTCTCGGTCTCGGCTCCGGCGCCGGAGCTGCCTCTTCCGCCGTCTCAGTCGTTGCCCATTTCCGCTGCTGCTGCTCTGAACTCCGGCGGTTGGTACCGG
CCGGTTTTGGTGATTCTTACGGCGGCTTTCGCGGCGGAGGTCGGTCGC

mRNA sequence

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Protein sequence

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FSLYFPIFMAYSASLALASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYR
PVLVILTAAFAAEVGR

MC09g0661 (gene) of Bitter gourd (Dali-11) v1 genome