; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0862 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0862
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPRA1 family protein
Genome locationMC09:9916439..9916669
RNA-Seq ExpressionMC09g0862
SyntenyMC09g0862
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0007127 - meiosis I (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0140097 - catalytic activity, acting on DNA (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56938.2 hypothetical protein Csa_011703 [Cucumis sativus]5.92e-1952.94Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC
        + T FLSNYCL +LLLIFLGLIYHPFS                   DP+RVFGFE +DLVL+IILGL T        V+ NVLISL IGAV+V ++A + 
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC

Query:  TT
        +T
Subjt:  TT
XP_008438582.1 PREDICTED: PRA1 family protein D isoform X2 [Cucumis melo]3.62e-1952.94Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC
        + T FLSNYCL +LLLIFLGLIYHPFS                   DP+RVFGFE +DLVL+IILGL T        V+ NVLISL IGAV+V ++A + 
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC

Query:  TT
        +T
Subjt:  TT
XP_016899068.1 PREDICTED: PRA1 family protein D isoform X1 [Cucumis melo]5.79e-1952.94Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC
        + T FLSNYCL +LLLIFLGLIYHPFS                   DP+RVFGFE +DLVL+IILGL T        V+ NVLISL IGAV+V ++A + 
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC

Query:  TT
        +T
Subjt:  TT
XP_016899069.1 PREDICTED: PRA1 family protein D isoform X3 [Cucumis melo]3.22e-1952.94Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC
        + T FLSNYCL +LLLIFLGLIYHPFS                   DP+RVFGFE +DLVL+IILGL T        V+ NVLISL IGAV+V ++A + 
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC

Query:  TT
        +T
Subjt:  TT
XP_022147270.1 PRA1 family protein D [Momordica charantia]7.24e-1956.57Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKM
        + T FLSNYCL ILLLIFLGLIYHPFS                   DPLRVFGF  +DLVLVIILGL T        V+ NVLISL IGAV+VS++A +
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKM
TrEMBL top hitse value%identityAlignment
A0A0A0L7A7 PRA1 family protein1.75e-1952.94Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC
        + T FLSNYCL +LLLIFLGLIYHPFS                   DP+RVFGFE +DLVL+IILGL T        V+ NVLISL IGAV+V ++A + 
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC

Query:  TT
        +T
Subjt:  TT
A0A1S3AXE4 PRA1 family protein1.75e-1952.94Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC
        + T FLSNYCL +LLLIFLGLIYHPFS                   DP+RVFGFE +DLVL+IILGL T        V+ NVLISL IGAV+V ++A + 
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC

Query:  TT
        +T
Subjt:  TT
A0A1S4DSV7 PRA1 family protein1.56e-1952.94Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC
        + T FLSNYCL +LLLIFLGLIYHPFS                   DP+RVFGFE +DLVL+IILGL T        V+ NVLISL IGAV+V ++A + 
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC

Query:  TT
        +T
Subjt:  TT
A0A1S4DSY6 PRA1 family protein2.80e-1952.94Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC
        + T FLSNYCL +LLLIFLGLIYHPFS                   DP+RVFGFE +DLVL+IILGL T        V+ NVLISL IGAV+V ++A + 
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC

Query:  TT
        +T
Subjt:  TT
A0A5D3D201 PRA1 family protein1.75e-1952.94Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC
        + T FLSNYCL +LLLIFLGLIYHPFS                   DP+RVFGFE +DLVL+IILGL T        V+ NVLISL IGAV+V ++A + 
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFSQ------------------DPLRVFGFEWEDLVLVIILGLPTR-------VYFNVLISLKIGAVMVSVYAKMC

Query:  TT
        +T
Subjt:  TT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G08770.1 prenylated RAB acceptor 1.E4.4e-0429.81Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHPFS--------------------QDPLRVFGFEWEDLVLVIILGLP-------TRVYFNVLISLKIGAVMVSVYAK
        + ++F  NY L +L ++FLGLIYHP S                     D + + G E +D +++++L L        T V  NVL+SL IG ++V  +  
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHPFS--------------------QDPLRVFGFEWEDLVLVIILGLP-------TRVYFNVLISLKIGAVMVSVYAK

Query:  MCTT
           T
Subjt:  MCTT
AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein7.5e-0430.85Show/hide
Query:  HFLSNYCLPILLLIFLGLIYHPFS------------------QDPLRVFGFEWED-------LVLVIILGLPTRVYFNVLISLKIGAVMVSVYA
        +F +NY + +L ++FL L+YHP S                   +PL VFG++ +D        VL +++ L T    N+L SL   AV+V ++A
Subjt:  HFLSNYCLPILLLIFLGLIYHPFS------------------QDPLRVFGFEWED-------LVLVIILGLPTRVYFNVLISLKIGAVMVSVYA
AT3G13710.1 prenylated RAB acceptor 1.F41.5e-0434.02Show/hide
Query:  DFTHFLSNYCLPILLLIFLGLIYHP-----------------FSQD-PLRVFGFEWED-------LVLVIILGLPTRVYFNVLISLKIGAVMVSVYA
        +  +F SNY + IL +IF  LI+HP                 F +D PL+VF F+ +D        V+ I+L L T   FN++ +L  GAV+V ++A
Subjt:  DFTHFLSNYCLPILLLIFLGLIYHP-----------------FSQD-PLRVFGFEWED-------LVLVIILGLPTRVYFNVLISLKIGAVMVSVYA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACTTTACGCATTTCCTCTCCAATTATTGCCTTCCTATCTTACTCCTCATCTTTCTTGGACTCATTTACCATCCATTTTCTCAAGATCCACTTAGGGTTTTTGGTTTTGA
GTGGGAGGATTTGGTATTGGTCATTATTCTAGGGTTGCCTACTAGGGTTTATTTTAATGTGCTGATTTCGCTCAAAATTGGGGCTGTGATGGTTTCTGTTTATGCAAAGA
TGTGCACAACA
mRNA sequenceShow/hide mRNA sequence
GACTTTACGCATTTCCTCTCCAATTATTGCCTTCCTATCTTACTCCTCATCTTTCTTGGACTCATTTACCATCCATTTTCTCAAGATCCACTTAGGGTTTTTGGTTTTGA
GTGGGAGGATTTGGTATTGGTCATTATTCTAGGGTTGCCTACTAGGGTTTATTTTAATGTGCTGATTTCGCTCAAAATTGGGGCTGTGATGGTTTCTGTTTATGCAAAGA
TGTGCACAACA
Protein sequenceShow/hide protein sequence
DFTHFLSNYCLPILLLIFLGLIYHPFSQDPLRVFGFEWEDLVLVIILGLPTRVYFNVLISLKIGAVMVSVYAKMCTT