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MC09g0864 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0864
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationMC09:9944800..9945015
RNA-Seq ExpressionMC09g0864
SyntenyMC09g0864
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.37e-1255.71Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEF
        I+LNLSD V+R+VID + AY  ++KLD ++ S DL N AYV E+F T++MD + SL EN+ EFKK+SS+F
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEF

KAA0060586.1 putative gag protein [Cucumis melo var. makuwa]4.13e-1150.68Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMDS-KSLGENVDEFKKMSSEFNNL
        I+L LSD VL ++ID +  Y+ + KL+ M+L+ DL N AY+ EKF TY MDS +SL + + EFKK+S+EF +L
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMDS-KSLGENVDEFKKMSSEFNNL

KAA0063883.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.59e-1253.42Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEFNNL
        I+LNLSD VLR+VI  +  Y  ++KL+ ++ S DL N AYV E+F T++MD +KSL EN+ EFKK+SS+F  L
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEFNNL

TYJ96960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.39e-1152.05Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEFNNL
        I+LNLSD VL++VI  +  Y  ++KL+ ++ S DL N AY+ E+FLTY+MD +KSL EN+ EFKK+S +F  L
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEFNNL

XP_038902421.1 uncharacterized protein LOC120089066 [Benincasa hispida]3.77e-1147.95Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMDS-KSLGENVDEFKKMSSEFNNL
        I+LN++D VLRQ++D + A+    KL+ ++L+ DL N+A++ E F TY+MD+ KSL EN++EFK++SSEF ++
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMDS-KSLGENVDEFKKMSSEFNNL

TrEMBL top hitse value%identityAlignment
A0A5A7V1L8 Retrovirus-related Pol polyprotein from transposon TNT 1-943.08e-1255.71Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEF
        I+LNLSD V+R+VID + AY  ++KLD ++ S DL N AYV E+F T++MD + SL EN+ EFKK+SS+F
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEF

A0A5A7V269 Putative gag protein2.00e-1150.68Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMDS-KSLGENVDEFKKMSSEFNNL
        I+L LSD VL ++ID +  Y+ + KL+ M+L+ DL N AY+ EKF TY MDS +SL + + EFKK+S+EF +L
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMDS-KSLGENVDEFKKMSSEFNNL

A0A5A7V6Z9 Retrovirus-related Pol polyprotein from transposon TNT 1-942.71e-1253.42Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEFNNL
        I+LNLSD VLR+VI  +  Y  ++KL+ ++ S DL N AYV E+F T++MD +KSL EN+ EFKK+SS+F  L
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEFNNL

A0A5D3BAU2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.16e-1152.05Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEFNNL
        I+LNLSD VL++VI  +  Y  ++KL+ ++ S DL N AY+ E+FLTY+MD +KSL EN+ EFKK+S +F  L
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMD-SKSLGENVDEFKKMSSEFNNL

A0A5D3BSZ6 Putative gag protein1.39e-1050.68Show/hide
Query:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMDS-KSLGENVDEFKKMSSEFNNL
        I+L LSD VL ++ID +  Y+ + KL+ M+L+ DL N AY+ EKF TY MDS +SL + + EFKK+S+EF +L
Subjt:  IILNLSD-VLRQVIDLKPAYQTYEKLDSMFLSNDL-NEAYVWEKFLTYQMDS-KSLGENVDEFKKMSSEFNNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCATTTTAAATCTCAGTGACGTTTTGAGGCAAGTGATCGACTTAAAACCTGCATATCAAACCTATGAGAAATTAGATTCAATGTTTCTCTCTAATGACCTTAACGAGGC
GTATGTATGGGAGAAGTTCTTAACCTACCAAATGGATAGTAAATCGCTCGGTGAAAATGTTGATGAATTTAAGAAAATGTCCTCTGAATTCAATAACTTA
mRNA sequenceShow/hide mRNA sequence
ATCATTTTAAATCTCAGTGACGTTTTGAGGCAAGTGATCGACTTAAAACCTGCATATCAAACCTATGAGAAATTAGATTCAATGTTTCTCTCTAATGACCTTAACGAGGC
GTATGTATGGGAGAAGTTCTTAACCTACCAAATGGATAGTAAATCGCTCGGTGAAAATGTTGATGAATTTAAGAAAATGTCCTCTGAATTCAATAACTTA
Protein sequenceShow/hide protein sequence
IILNLSDVLRQVIDLKPAYQTYEKLDSMFLSNDLNEAYVWEKFLTYQMDSKSLGENVDEFKKMSSEFNNL