; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g0881 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g0881
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S ribosomal protein L27
Genome locationMC09:11012057..11012461
RNA-Seq ExpressionMC09g0881
SyntenyMC09g0881
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001141 - Ribosomal protein L27e
IPR008991 - Translation protein SH3-like domain superfamily
IPR018262 - Ribosomal protein L27e, conserved site
IPR038655 - Ribosomal protein L27e superfamily
IPR041991 - Eukaryotic Ribosomal Protein L27, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157002.1 60S ribosomal protein L27-3 [Momordica charantia]7.48e-88100Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

XP_022931548.1 60S ribosomal protein L27-2-like [Cucurbita moschata]1.02e-8597.04Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV+VLQGRYAGRKAVI+RA DDGTRDR YGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

XP_022931553.1 60S ribosomal protein L27-2-like [Cucurbita moschata]1.45e-8596.3Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV++LQGRYAGRKAVI+RA DDGTRDR YGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

XP_022942297.1 60S ribosomal protein L27-2 [Cucurbita moschata]8.40e-8594.81Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV+VLQGRYAGRKAVI+RA DDGTRDR YGHCLVAG+KKYP+KVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+DSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

XP_022985069.1 60S ribosomal protein L27-2-like [Cucurbita maxima]2.93e-8595.56Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV++LQGRYAGRKAVI+RA DDGTRDR YGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIK+VNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

TrEMBL top hitse value%identityAlignment
A0A6J1DTF0 60S ribosomal protein L273.62e-88100Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

A0A6J1EZ01 60S ribosomal protein L274.95e-8697.04Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV+VLQGRYAGRKAVI+RA DDGTRDR YGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

A0A6J1EZ07 60S ribosomal protein L277.03e-8696.3Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV++LQGRYAGRKAVI+RA DDGTRDR YGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

A0A6J1JA75 60S ribosomal protein L274.95e-8697.04Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV+VLQGRYAGRKAVI+RA DDGTRDR YGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

A0A6J1JC92 60S ribosomal protein L271.42e-8595.56Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV++LQGRYAGRKAVI+RA DDGTRDR YGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIK+VNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

SwissProt top hitse value%identityAlignment
P41101 60S ribosomal protein L273.3e-5277.7Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDL----KDVVT
        M KFLK NKAV++LQG+YAGRKAVIVRA D+GTRDRPYGHCLVAGI +YP KVIRKDS+KK  KKSRVKAFIKLVNY H+MPTRYTLD DL    KDVV 
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDL----KDVVT

Query:  IDSLQSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
         D LQ++DKKVT A+ TK R  ERFKTGKNRWFFTKLRF
Subjt:  IDSLQSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

P51419 60S ribosomal protein L27-32.2e-5982.96Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV++LQGRYAG+KAVI+++ DDG RDRPYGHCLVAG+KKYP+KVIRKDS+KKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKV A KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Q05462 60S ribosomal protein L271.1e-5883.7Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAV++LQGRYAG+KAVIV+  DDGTR++PYGHCLVAGIKK+P+KVI+KDS+KKTAKKSRVKAF+KLVNY+HLMPTRYTLDVDLKD V  D L
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKVTA KETKK  EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Q8LCL3 60S ribosomal protein L27-22.4e-5882.22Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV++LQGRYAG+KAVI+++ DDGT DR YGHCLVAG+KKYP+KVIRKDS+KKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        +SKDKKVTA KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Q9SKX8 60S ribosomal protein L27-18.8e-5374.07Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVK +K  KAV++LQGRY G+KAVIV++ DDGT ++ YGHCLVAG+KKYP+KVIRKDS+KKTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
         SKDKKVTA KE K +FEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Arabidopsis top hitse value%identityAlignment
AT2G32220.1 Ribosomal L27e protein family6.2e-5474.07Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVK +K  KAV++LQGRY G+KAVIV++ DDGT ++ YGHCLVAG+KKYP+KVIRKDS+KKTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
         SKDKKVTA KE K +FEERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

AT3G22230.1 Ribosomal L27e protein family1.7e-5982.22Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV++LQGRYAG+KAVI+++ DDGT DR YGHCLVAG+KKYP+KVIRKDS+KKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        +SKDKKVTA KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

AT4G15000.1 Ribosomal L27e protein family1.5e-6082.96Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV++LQGRYAG+KAVI+++ DDG RDRPYGHCLVAG+KKYP+KVIRKDS+KKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF
        QSKDKKV A KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

AT4G15000.2 Ribosomal L27e protein family5.3e-5381.3Show/hide
Query:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKQNKAV++LQGRYAG+KAVI+++ DDG RDRPYGHCLVAG+KKYP+KVIRKDS+KKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVTAAKETKKRFEERFKT
        QSKDKKV A KE K + EERFKT
Subjt:  QSKDKKVTAAKETKKRFEERFKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAATTCCTGAAGCAGAACAAGGCGGTGGTGGTGCTTCAGGGCCGTTACGCCGGCCGGAAGGCGGTCATCGTTAGGGCATTGGACGATGGAACCAGAGATCGGCC
TTACGGCCACTGCTTGGTCGCCGGAATAAAGAAATACCCGGCGAAGGTGATCCGCAAGGACTCCTCCAAGAAGACCGCTAAGAAATCGCGAGTGAAGGCCTTCATCAAGC
TCGTCAATTACAGGCACCTCATGCCCACCAGGTACACTCTCGATGTCGATCTCAAAGACGTCGTCACCATCGATTCCTTGCAATCCAAGGACAAGAAGGTTACTGCGGCT
AAGGAGACCAAGAAGCGGTTCGAGGAGAGGTTCAAAACAGGCAAGAACAGATGGTTTTTCACAAAGCTCAGGTTC
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAATTCCTGAAGCAGAACAAGGCGGTGGTGGTGCTTCAGGGCCGTTACGCCGGCCGGAAGGCGGTCATCGTTAGGGCATTGGACGATGGAACCAGAGATCGGCC
TTACGGCCACTGCTTGGTCGCCGGAATAAAGAAATACCCGGCGAAGGTGATCCGCAAGGACTCCTCCAAGAAGACCGCTAAGAAATCGCGAGTGAAGGCCTTCATCAAGC
TCGTCAATTACAGGCACCTCATGCCCACCAGGTACACTCTCGATGTCGATCTCAAAGACGTCGTCACCATCGATTCCTTGCAATCCAAGGACAAGAAGGTTACTGCGGCT
AAGGAGACCAAGAAGCGGTTCGAGGAGAGGTTCAAAACAGGCAAGAACAGATGGTTTTTCACAAAGCTCAGGTTC
Protein sequenceShow/hide protein sequence
MVKFLKQNKAVVVLQGRYAGRKAVIVRALDDGTRDRPYGHCLVAGIKKYPAKVIRKDSSKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAA
KETKKRFEERFKTGKNRWFFTKLRF