CuGenDBv2

Gene ID	MC09g0997
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ubiquitin-conjugating enzyme
Genome location	MC09:15505663..15505968
RNA-Seq Expression	MC09g0997
Synteny	MC09g0997
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function) GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domains	IPR000608 - Ubiquitin-conjugating enzyme E2 IPR016135 - Ubiquitin-conjugating enzyme/RWD-like IPR023313 - Ubiquitin-conjugating enzyme, active site

Homology

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GenBank top hits

e value

%identity

Alignment

RWR85979.1 ubiquitin-conjugating enzyme E2 10-like protein [Cinnamomum micranthum f. kanehirae]

2.24e-42

61.76

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL+RDPP++CS G +SD D   W+ATIIGP  +PY  G+F ++I+ PP+YP KPPK+ FKTK++HPNINS GNICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

VAI54130.1 unnamed protein product [Triticum turgidum subsp. durum]

2.93e-41

60.4

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL+RDPP++CS G +S +D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV FKTK++HPNINS GNICLDILK  WSPA T+S V 
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V
        +
Subjt:  V

XP_020177840.1 ubiquitin-conjugating enzyme E2 28 [Aegilops tauschii subsp. strangulata]

2.60e-41

60.78

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL+RDPP++CS G +S +D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV FKTK++HPNINS GNICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

XP_022157782.1 ubiquitin-conjugating enzyme E2 11-like [Momordica charantia]

5.05e-70

100

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        VA
Subjt:  VA

XP_022841295.1 Ubiquitin-conjugating enzyme, active site [Ostreococcus tauri]

3.70e-41

61.76

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL++DPP++CS G  SD D   W+ATIIGP  +PY+ GLF ++I+ PP+YP KPPKV FKTK+YHPN+NS+G+ICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

TrEMBL top hits

e value

%identity

Alignment

A0A3S3QJA8 Ubiquitin-conjugating enzyme E2 10-like protein

1.09e-42

61.76

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL+RDPP++CS G +SD D   W+ATIIGP  +PY  G+F ++I+ PP+YP KPPK+ FKTK++HPNINS GNICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

A0A453N1K2 UBC core domain-containing protein

1.26e-41

60.78

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL+RDPP++CS G +S +D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV FKTK++HPNINS GNICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

A0A6J1DVE6 ubiquitin-conjugating enzyme E2 11-like

2.44e-70

100

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        VA
Subjt:  VA

M8A4S1 Ubiquitin-conjugating enzyme E2 28

1.26e-41

60.78

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL+RDPP++CS G +S +D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV FKTK++HPNINS GNICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

W5GGN9 UBC core domain-containing protein

1.26e-41

60.78

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL+RDPP++CS G +S +D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV FKTK++HPNINS GNICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

SwissProt top hits

e value

%identity

Alignment

P15731 Ubiquitin-conjugating enzyme E2 4

1.4e-31

60.78

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI KE  DL RDPP++CS G + D  Y+ W+A+I+GP  +PY  G+F LSI+ P +YP KPPK++F TKIYHPNIN+ GNICLDILK  WSPA TLS VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

P15732 Ubiquitin-conjugating enzyme E2-16 kDa

8.4e-32

62.75

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI KE  DL RDPP++CS G + D  Y+ W+A+I+GP  +PY  G+F LSI+ P +YP KPPKV F TKIYHPNINS GNICLDILK  WSPA TLS VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

P35132 SUMO-conjugating enzyme UBC9

1.9e-31

57.84

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPP++CS G +++ D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV F+TK++HPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

P35134 Ubiquitin-conjugating enzyme E2 11

2.6e-33

62.75

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPPSNCS G +++ D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKV+FKTK+YHPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

P35135 Ubiquitin-conjugating enzyme E2-17 kDa

1.4e-31

58.82

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPP++CS G +++ D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKV F+TK++HPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

Arabidopsis top hits

e value

%identity

Alignment

AT1G64230.1 ubiquitin-conjugating enzyme 28

1.7e-32

56.86

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPP++CS G +++ D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV F+TK++HPN+NS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

AT3G08690.1 ubiquitin-conjugating enzyme 11

1.9e-34

62.75

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPPSNCS G +++ D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKV+FKTK+YHPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

AT3G08690.2 ubiquitin-conjugating enzyme 11

1.9e-34

62.75

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPPSNCS G +++ D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKV+FKTK+YHPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

AT4G27960.1 ubiquitin conjugating enzyme 9

1.3e-32

57.84

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPP++CS G +++ D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV F+TK++HPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

AT4G27960.2 ubiquitin conjugating enzyme 9

1.3e-32

57.84

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Query:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPP++CS G +++ D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV F+TK++HPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  VA
        ++
Subjt:  VA

Sequences

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CDS sequence

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CGAATTCTGAAGGAAAATGATGATCTTCGAAGAGACCCACCGTCAAACTGCAGCGGTGGGATCATCAGTGACAGTGACTACAATCAGTGGGAGGCAACCATCATCGGACC
AGAAGGTACCCCTTACGAGAGAGGTTTATTCAAACTCTCCATATATTTGCCTCCCGAGTATCCAATGAAGCCACCAAAAGTTACCTTCAAAACTAAAATTTACCATCCTA
ACATCAATAGTAAAGGTAATATTTGCCTTGACATTCTCAAGGGAAATTGGAGTCCTGCCTTTACACTTTCAAGTGTGTTGGTTGCA

mRNA sequence

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Protein sequence

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RILKENDDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVTFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVLVA

MC09g0997 (gene) of Bitter gourd (Dali-11) v1 genome