CuGenDBv2

Gene ID	MC09g0998
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ubiquitin-conjugating enzyme subfamily protein
Genome location	MC09:15508623..15509022
RNA-Seq Expression	MC09g0998
Synteny	MC09g0998
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0005515 - protein binding (molecular function) GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domains	IPR000608 - Ubiquitin-conjugating enzyme E2 IPR016135 - Ubiquitin-conjugating enzyme/RWD-like IPR023313 - Ubiquitin-conjugating enzyme, active site

Homology

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GenBank top hits

e value

%identity

Alignment

KIO23687.1 hypothetical protein M407DRAFT_244708 [Tulasnella calospora MUT 4182]

1.18e-52

58.74

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI KE ND+ RDPP++CS G  +D +  +WEATI GP+G+PY  G+FKL +  P +YP KPPKV F TKIYHPNINS G+ICLDILK  WSPA TLS VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA+LYK +R +++  AREWTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

RWR85979.1 ubiquitin-conjugating enzyme E2 10-like protein [Cinnamomum micranthum f. kanehirae]

8.59e-53

55.94

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL+RDPP++CS G +SD D   W+ATIIGP  +PY  G+F ++I+ PP+YP KPPK++FKTK++HPNINS GNICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA + K +R +++  AR WTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

XP_011460443.1 PREDICTED: ubiquitin-conjugating enzyme E2 11-like [Fragaria vesca subsp. vesca]

1.02e-53

57.34

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL RDPP+NCS G +S  +   W+ATI+GP  +PY  G+F++SI+ PP+YP KPPKVSFKTK++HPN+NS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK NR +++  AR WTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

XP_022157782.1 ubiquitin-conjugating enzyme E2 11-like [Momordica charantia]

1.12e-88

90.91

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKEN+DLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKV+FKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        V          PDDPLEIEIARLYKNNR QFDKIAREWTQKFA
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

XP_022841295.1 Ubiquitin-conjugating enzyme, active site [Ostreococcus tauri]

1.22e-52

55.94

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL++DPP++CS G  SD D   W+ATIIGP  +PY+ GLF ++I+ PP+YP KPPKV+FKTK+YHPN+NS+G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK +R +++++A+EWT+K+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

TrEMBL top hits

e value

%identity

Alignment

A0A096PAK6 Ubiquitin-conjugating enzyme, active site

5.90e-53

55.94

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL++DPP++CS G  SD D   W+ATIIGP  +PY+ GLF ++I+ PP+YP KPPKV+FKTK+YHPN+NS+G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK +R +++++A+EWT+K+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

A0A0C3LQH9 UBC core domain-containing protein

5.72e-53

58.74

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI KE ND+ RDPP++CS G  +D +  +WEATI GP+G+PY  G+FKL +  P +YP KPPKV F TKIYHPNINS G+ICLDILK  WSPA TLS VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA+LYK +R +++  AREWTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

A0A3S3QJA8 Ubiquitin-conjugating enzyme E2 10-like protein

4.16e-53

55.94

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL+RDPP++CS G +SD D   W+ATIIGP  +PY  G+F ++I+ PP+YP KPPK++FKTK++HPNINS GNICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA + K +R +++  AR WTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

A0A6J1DVE6 ubiquitin-conjugating enzyme E2 11-like

5.43e-89

90.91

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKEN+DLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKV+FKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        V          PDDPLEIEIARLYKNNR QFDKIAREWTQKFA
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

A0A7R9XRZ0 Hypothetical protein

8.38e-53

55.94

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI+KE  DL++DPP++CS G  SD D   W+ATIIGP  +PY+ GLF ++I+ PP+YP KPPKV+FKTK+YHPN+NS+G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK +R +++ +A+EWT+K+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

SwissProt top hits

e value

%identity

Alignment

P35134 Ubiquitin-conjugating enzyme E2 11

2.1e-43

58.04

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPPSNCS G +++ D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKVSFKTK+YHPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK +R +++  AR WTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

P62837 Ubiquitin-conjugating enzyme E2 D2

1.4e-42

57.34

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI KE NDL RDPP+ CS G + D D   W+ATI+GP  +PY+ G+F L+I+ P +YP KPPKV+F T+IYHPNINS G+ICLDIL+  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIAR+YK +R ++++IAREWTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

P62838 Ubiquitin-conjugating enzyme E2 D2

1.4e-42

57.34

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI KE NDL RDPP+ CS G + D D   W+ATI+GP  +PY+ G+F L+I+ P +YP KPPKV+F T+IYHPNINS G+ICLDIL+  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIAR+YK +R ++++IAREWTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

P62839 Ubiquitin-conjugating enzyme E2 D2

1.4e-42

57.34

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI KE NDL RDPP+ CS G + D D   W+ATI+GP  +PY+ G+F L+I+ P +YP KPPKV+F T+IYHPNINS G+ICLDIL+  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIAR+YK +R ++++IAREWTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

Q1RMX2 Ubiquitin-conjugating enzyme E2 D2

1.4e-42

57.34

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RI KE NDL RDPP+ CS G + D D   W+ATI+GP  +PY+ G+F L+I+ P +YP KPPKV+F T+IYHPNINS G+ICLDIL+  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIAR+YK +R ++++IAREWTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

Arabidopsis top hits

e value

%identity

Alignment

AT1G64230.1 ubiquitin-conjugating enzyme 28

1.9e-42

53.15

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPP++CS G +++ D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV+F+TK++HPN+NS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK +R +++  AR WTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

AT1G64230.2 ubiquitin-conjugating enzyme 28

1.9e-42

53.15

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPP++CS G +++ D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV+F+TK++HPN+NS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK +R +++  AR WTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

AT3G08690.1 ubiquitin-conjugating enzyme 11

1.5e-44

58.04

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPPSNCS G +++ D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKVSFKTK+YHPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK +R +++  AR WTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

AT3G08690.2 ubiquitin-conjugating enzyme 11

1.5e-44

58.04

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPPSNCS G +++ D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKVSFKTK+YHPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK +R +++  AR WTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

AT5G41700.2 ubiquitin conjugating enzyme 8

3.2e-42

53.85

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Query:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL
        RILKE  DL++DPP++CS G +++ D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV+F+TK++HPNINS G+ICLDILK  WSPA T+S VL
Subjt:  RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVL

Query:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA
        +          PDDPL  EIA +YK +R +++  AR WTQK+A
Subjt:  V----------PDDPLEIEIARLYKNNRLQFDKIAREWTQKFA

Sequences

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CDS sequence

Show/hide CDS sequence

CGAATTCTGAAGGAAAATAATGATCTTCGAAGAGATCCACCATCAAACTGTAGCGGTGGGATCATCAGTGACAGTGACTACAATCAGTGGGAGGCAACCATCATCGGACC
AGAAGGTACCCCTTACGAGAGAGGTTTATTCAAACTCTCCATATATTTGCCTCCCGAGTATCCAATGAAGCCACCAAAAGTTAGCTTCAAAACTAAAATTTACCATCCTA
ACATCAATAGTAAAGGTAATATTTGCCTTGACATTCTCAAAGGAAATTGGAGTCCTGCCTTTACACTTTCAAGTGTGTTGGTTCCAGATGATCCACTTGAAATAGAGATT
GCAAGGCTTTACAAGAACAATAGGCTTCAATTTGACAAGATTGCTCGTGAATGGACACAAAAATTTGCT

mRNA sequence

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Protein sequence

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RILKENNDLRRDPPSNCSGGIISDSDYNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICLDILKGNWSPAFTLSSVLVPDDPLEIEI
ARLYKNNRLQFDKIAREWTQKFA

MC09g0998 (gene) of Bitter gourd (Dali-11) v1 genome