CuGenDBv2

Gene ID	MC09g1016
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	binding partner of ACD11 1-like isoform X1
Genome location	MC09:15853792..15856026
RNA-Seq Expression	MC09g1016
Synteny	MC09g1016
Gene Ontology terms	GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142266.1 binding partner of ACD11 1 [Cucumis sativus]

1.82e-166

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        MSMRTVKVSNISK TSERDI+EFFSFSGEILYVEMQRE+ENTQ+AYVTY+DSQGADTAILLTGAKIGDLSVTITLVENYHLPPE +SSI+DKRQTVTGIA
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
        PN+AEDVVSTMLAKGFILGKDA+NKAK  DERL LTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTK+ALAVAEQKA+SAGTALMS
Subjt:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS

Query:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS
        NYYVLTGA+WFSNAVTAV KAAEEVTQMTK KVEKAEEEKKE+IYRERTGII++FAELHLDEPLPGEPAIVPVNS
Subjt:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS

XP_008452423.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]

3.66e-166

91.64

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        MSMRTVKVSNISK TSERDI+EFFSFSGEILYVEMQRE+ENTQ+AYVTY+DSQGADTAILLTGAKIGDLSVTITLVENYHLPPE +SSI+DKRQTVTGIA
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
        PN+AEDVVSTMLAKGFILGKDA+NKAK  DERL  TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKTK+ALAVAEQKA+SAGTALMS
Subjt:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS

Query:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS
        NYYVLTGA+WFSNAVTAV KAAEEVTQMTK KVEKAEEEKKE+IYRERTGII++FAELHLDEPLPGEPAIVPVNS
Subjt:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS

XP_022146867.1 binding partner of ACD11 1-like isoform X1 [Momordica charantia]

1.94e-184

100

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
        PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
Subjt:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS

Query:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ
        NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ
Subjt:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ

XP_022146868.1 binding partner of ACD11 1-like isoform X2 [Momordica charantia]

2.99e-183

100

Show/hide

Query:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN
        MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN
Subjt:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN

Query:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY
        RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY
Subjt:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY

Query:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ
        YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ
Subjt:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ

XP_038891484.1 binding partner of ACD11 1 [Benincasa hispida]

6.34e-167

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        MSMRTVKVSNISK TSERDI+EFFSFSGEILYVEMQRETENTQ+AYVTY+DSQGADTAILLTGAKIGDLSVTITLVENYHLPPE +SSI+DK+QTV GIA
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
        PN+AEDVVSTMLAKGFILGKDA+NKAK  DERL LTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKTK+ALAVAEQKA+SAGTALMS
Subjt:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS

Query:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS
        NYYVLTGA+WFSNAVTAV KAAEEVTQMTK KVEKAEEEKKE+IYRERTGIIN+FAELHLDEPLPGEPAIVPVNS
Subjt:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIR7 RRM domain-containing protein

8.79e-167

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        MSMRTVKVSNISK TSERDI+EFFSFSGEILYVEMQRE+ENTQ+AYVTY+DSQGADTAILLTGAKIGDLSVTITLVENYHLPPE +SSI+DKRQTVTGIA
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
        PN+AEDVVSTMLAKGFILGKDA+NKAK  DERL LTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTK+ALAVAEQKA+SAGTALMS
Subjt:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS

Query:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS
        NYYVLTGA+WFSNAVTAV KAAEEVTQMTK KVEKAEEEKKE+IYRERTGII++FAELHLDEPLPGEPAIVPVNS
Subjt:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS

A0A1S3BUX7 binding partner of ACD11 1-like isoform X1

1.77e-166

91.64

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        MSMRTVKVSNISK TSERDI+EFFSFSGEILYVEMQRE+ENTQ+AYVTY+DSQGADTAILLTGAKIGDLSVTITLVENYHLPPE +SSI+DKRQTVTGIA
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
        PN+AEDVVSTMLAKGFILGKDA+NKAK  DERL  TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKTK+ALAVAEQKA+SAGTALMS
Subjt:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS

Query:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS
        NYYVLTGA+WFSNAVTAV KAAEEVTQMTK KVEKAEEEKKE+IYRERTGII++FAELHLDEPLPGEPAIVPVNS
Subjt:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS

A0A6J1CZP8 binding partner of ACD11 1-like isoform X2

1.45e-183

100

Show/hide

Query:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN
        MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN
Subjt:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN

Query:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY
        RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY
Subjt:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY

Query:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ
        YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ
Subjt:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ

A0A6J1D0S5 binding partner of ACD11 1-like isoform X1

9.42e-185

100

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
        PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
Subjt:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS

Query:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ
        NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ
Subjt:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNSPRQ

A0A6J1FSI4 binding partner of ACD11 1-like isoform X3

5.07e-166

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        MSMRTVKVSNISK TSERDIEEFFSFSGEILYVEMQRETENTQ+AYVTY+DSQGADTAILLTGAKIGDLSVTI LVENYHLPPE +SSI+DKRQTVTG A
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS
        PN+AEDVVSTMLAKGFILGKDA+NKAK  DER  LTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKTK+ALAVAEQKASSAGTALMS
Subjt:  PNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMS

Query:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS
        NYYV TGA+WFSNAVTAV KAAEEVTQMTKAKVEKAEEEKKE+IYRERTGIIN+FAELHLDEPLPGEPAIVPVNS
Subjt:  NYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPVNS

SwissProt top hits

e value

%identity

Alignment

P87216 Protein vip1

1.1e-06

26.92

Show/hide

Query:  VKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPNRAE
        V V+NIS + +E+ I +FFSF G++  +  ++  E TQ A + +E      TA+LL  A +G   + IT  +         ++    +    G    R E
Subjt:  VKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPNRAE

Query:  D-----VVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVSEK---TKTALAVAEQKA
        D     ++S +L++G+ L    + K+  LD+   ++S          +  GI E   +G   VN      EK  E+D  F +S+K   T + ++    KA
Subjt:  D-----VVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVSEK---TKTALAVAEQKA

Query:  --SSAGTA
          ++AGT+
Subjt:  --SSAGTA

Q9LFD5 Binding partner of ACD11 1

1.8e-54

52.16

Show/hide

Query:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN
        +R+VKV N+S   +E DI+EFFSFSGE+  +++Q    N   AYVT++++QGA+TA+LL+GA I D SV I L  NY  P    +   + + +       
Subjt:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN

Query:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY
        +AEDVVS+MLAKGFILGKDA+ KAK  DE+   TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQV+E+TK+  A AEQ  SSAG+A+M N 
Subjt:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY

Query:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVE
        YVLTG SW + A   VA+AA EV Q TK KVE
Subjt:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVE

Arabidopsis top hits

e value

%identity

Alignment

AT1G67950.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.0e-65

53.14

Show/hide

Query:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN
        ++TVK+SN+S   S++D++EFFSFSG+I YVEM+ ET+ +Q+AYVT++DSQGA+TA+LLTGA I DL V+IT   NY LPPE L+  +D   +  G +  
Subjt:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN

Query:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAK  D+R +L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TK+ALA AE+ A SA TALM+N 
Subjt:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY

Query:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPV
        YV +GASWFSNA  AV KA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPV

AT1G67950.2 RNA-binding (RRM/RBD/RNP motifs) family protein

1.0e-65

53.14

Show/hide

Query:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN
        ++TVK+SN+S   S++D++EFFSFSG+I YVEM+ ET+ +Q+AYVT++DSQGA+TA+LLTGA I DL V+IT   NY LPPE L+  +D   +  G +  
Subjt:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN

Query:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAK  D+R +L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TK+ALA AE+ A SA TALM+N 
Subjt:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY

Query:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPV
        YV +GASWFSNA  AV KA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPV

AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein

6.7e-65

52.77

Show/hide

Query:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN
        ++TVK+SN+S   S++D++EFFSFSG+I YVEM+ ET+ +Q+AYVT++DSQGA+TA+LLTGA I DL V+IT   NY LPPE L ++  +  +  G +  
Subjt:  MRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPN

Query:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAK  D+R +L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TK+ALA AE+ A SA TALM+N 
Subjt:  RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNY

Query:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPV
        YV +GASWFSNA  AV KA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPV

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein

2.8e-71

56.77

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        M+M TVKVSN+S   ++RD++EFFSFSG+ILY+E Q ETE T+LAYVT++D QGA+TA+LL+GA I D SV +++  +Y L PE L+S+  K    +  A
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PN----RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGT
         +    +AEDVVS+MLAKGFILGKDAI KAK +DE+  LTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QVSEKTK+A+A AEQ  S+AG+
Subjt:  PN----RAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKASSAGT

Query:  ALMSNYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDE
        A+M N YVLTGA+W + A   VAKAAEEV Q  K KV  AEEE K         ++++FA +HL E
Subjt:  ALMSNYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein

5.3e-70

54.07

Show/hide

Query:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA
        MSM TVKVSN+S + +ERD++EFFSFSG+I Y+E Q E + ++LAYVT++D QGA+TA+LLTG+ I D SVT+T+  +Y LPP+ L+SI   +++    +
Subjt:  MSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIA

Query:  PNR--------AEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKAS
        P R        AEDVVS M++KGF+LGKDAI KAK LDE+  LTS ASA V S D+++G TEKI  GT VV+EKV+E+D+ FQV+EKTK+A+A AEQ  S
Subjt:  PNR--------AEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKTALAVAEQKAS

Query:  SAGTALMSNYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDE
        +AG+A+M N YVLTGA+W + A   V+KAAEEV Q  K KV  AEEE++     E+  ++++ A +HL E
Subjt:  SAGTALMSNYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

TGTCCCACGCTGGTAGTGAATAACAATGAAAAAGCAAAAGCAAAAGCAAAACCAACCAACCGTATCTGTTGTTTCCACTCTCCACAAAAATCTTCTCTTCTCCTCCTCCA
TTGCCGCCGCTCCTTCTCATCTTCCGCCATCGCTGATTCCTGCTTCTCACACCTTTCAGAAATGTCGATGAGAACTGTGAAGGTTAGCAATATCTCAAAAGATACTTCCG
AGAGAGATATCGAAGAATTCTTCTCATTTTCTGGTGAAATCCTTTATGTTGAAATGCAGAGAGAAACTGAAAATACTCAGCTTGCTTATGTTACTTATGAGGATTCCCAA
GGGGCAGATACTGCAATACTTTTGACAGGAGCAAAAATTGGTGATCTCTCTGTAACAATTACTCTGGTTGAGAATTACCATCTTCCACCTGAATTTCTATCATCAATCAT
GGATAAAAGGCAAACTGTTACCGGGATTGCCCCGAACCGGGCTGAAGATGTGGTAAGTACTATGCTTGCCAAGGGCTTCATCTTGGGGAAGGATGCTATCAATAAGGCAA
AAGATCTCGATGAACGACTCCACCTAACATCGAATGCTTCTGCGACTGTTGCTTCCATCGACCGCAAGATGGGCATAACCGAGAAAATAACTGCAGGAACAGCAGTGGTA
AACGAAAAGGTCAGGGAGATGGACGAAATGTTCCAGGTTTCCGAGAAGACGAAAACTGCCCTCGCAGTCGCCGAGCAGAAGGCAAGCAGTGCAGGAACCGCACTCATGAG
CAACTATTATGTGCTAACTGGAGCATCATGGTTTTCAAATGCTGTAACTGCAGTCGCAAAAGCTGCTGAAGAAGTGACCCAGATGACCAAGGCAAAAGTCGAGAAAGCGG
AGGAGGAGAAAAAGGAGAATATATACCGCGAAAGAACCGGGATCATTAACGACTTTGCCGAGCTCCATCTCGACGAGCCTTTACCGGGGGAGCCTGCTATAGTTCCAGTT
AATTCACCTAGACAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

CPTLVVNNNEKAKAKAKPTNRICCFHSPQKSSLLLLHCRRSFSSSAIADSCFSHLSEMSMRTVKVSNISKDTSERDIEEFFSFSGEILYVEMQRETENTQLAYVTYEDSQ
GADTAILLTGAKIGDLSVTITLVENYHLPPEFLSSIMDKRQTVTGIAPNRAEDVVSTMLAKGFILGKDAINKAKDLDERLHLTSNASATVASIDRKMGITEKITAGTAVV
NEKVREMDEMFQVSEKTKTALAVAEQKASSAGTALMSNYYVLTGASWFSNAVTAVAKAAEEVTQMTKAKVEKAEEEKKENIYRERTGIINDFAELHLDEPLPGEPAIVPV
NSPRQ

MC09g1016 (gene) of Bitter gourd (Dali-11) v1 genome