CuGenDBv2

Gene ID	MC09g1118
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	nuclear pore complex protein NUP88
Genome location	MC09:17182514..17189030
RNA-Seq Expression	MC09g1118
Synteny	MC09g1118
Gene Ontology terms	GO:0000055 - ribosomal large subunit export from nucleus (biological process) GO:0000056 - ribosomal small subunit export from nucleus (biological process) GO:0006406 - mRNA export from nucleus (biological process) GO:0006606 - protein import into nucleus (biological process) GO:0006611 - protein export from nucleus (biological process) GO:0009627 - systemic acquired resistance (biological process) GO:0045087 - innate immune response (biological process) GO:0005643 - nuclear pore (cellular component) GO:0005515 - protein binding (molecular function) GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domains	IPR019321 - Nucleoporin Nup88 IPR036322 - WD40-repeat-containing domain superfamily IPR037700 - Nucleoporin NUP88/NUP82

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600003.1 Nuclear pore complex protein NUP88, partial [Cucurbita argyrosperma subsp. sororia]

0.0

87.35

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYN D NE DS   RS TPK D DWVPL+THPVFTAA A D+G +VSPPLR+LL SDGASRL+FWD T LC+HRISIRLGEPEPTSVLAASPSKVLQPD
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        V LDFVVHKISINKNGSA+ALVGPGGL+IMYLYGH+S+R++ T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGVLSSDSVFRLFNLSSD +QPE
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSL ISWLEETFPN
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV
        LVQAT GG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRV V
Subjt:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV

Query:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ
        D +DNILG AMICE ITGKLS+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SL+ MFVDKLMDERIYALH+GGIDSIILHFLPFTSQSRGQDQ
Subjt:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ

Query:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV
        TM+TPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIVGVTISQEC+VLEMKTWNLQVP+Q +NFLN  K  +  T EKNESERS+IISK+LLSGPKV
Subjt:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV

Query:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH
        VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ   L+EAQ+KLLKV GKQ+LLEDRIERAIKLHN LEER+H
Subjt:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH

Query:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK
        RLKNLPGAHKRPLSKAEREFKSTLDHF GVE+DALHTSIDTLTARLRRY NSSKNNNLVN QQ K++RRNT VQGSQISQLKSSL+KLSLLNAEN KKVK
Subjt:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK

Query:  LVESTIKSKERNRC
        LVESTIKSKE NRC
Subjt:  LVESTIKSKERNRC

XP_022156891.1 nuclear pore complex protein NUP88 [Momordica charantia]

0.0

100

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPEQ
        VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPEQ
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPEQ

Query:  EYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPNL
        EYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPNL
Subjt:  EYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPNL

Query:  VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVD
        VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVD
Subjt:  VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVD

Query:  ADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQT
        ADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQT
Subjt:  ADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQT

Query:  MRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVVLL
        MRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVVLL
Subjt:  MRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVVLL

Query:  PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLK
        PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLK
Subjt:  PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLK

Query:  NLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKLVE
        NLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKLVE
Subjt:  NLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKLVE

Query:  STIKSKERNRC
        STIKSKERNRC
Subjt:  STIKSKERNRC

XP_022943164.1 nuclear pore complex protein NUP88-like [Cucurbita moschata]

0.0

87.35

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYN D NE DS   RS TPK D DWVPL+THPVFTAA A D+G +VSPPLR+LL SDGASRL+FWD T LC+HRISIRLGEPEPTSVLAASPSKVLQPD
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        V LDFVVHKISINKNGSA+ALVGPGGL+IMYLYGH+S+R++ T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGVLSSDSVFRLFNLSSD +QPE
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSL ISWLEETFPN
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV
        LVQAT GG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRV V
Subjt:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV

Query:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ
        D +DNILG AMICE ITGKLS+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SL+ MFVDKLMDERIYALH+GGIDSIILHFLPFTSQSRGQDQ
Subjt:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ

Query:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV
        TM+TPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIVGVTISQEC+VLEMKTWNLQVP+Q +NFLN  K  +  T EKNESERS+IISK+LLSGPKV
Subjt:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV

Query:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH
        VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ   L+EAQ+KLLKV GKQ+LLEDRIERAIKLHN LEER+H
Subjt:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH

Query:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK
        RLKNLPGAHKRPLSKAEREFKSTLDHF GVE+DALHTSIDTLTARLRRY NSSKNNNLVN QQ K++RRNT VQGSQISQLKSSL+KLSLLNAEN KKVK
Subjt:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK

Query:  LVESTIKSKERNRC
        LVESTIKSKE NRC
Subjt:  LVESTIKSKERNRC

XP_022995007.1 nuclear pore complex protein NUP88-like [Cucurbita maxima]

0.0

87.47

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYN D NE DS   RS TPKLD DWVPL+THPVFTAA A D+G +VSPPLR+LL SDGASRL+FWD T LC+HRISIRLGEPEPTSVLAASPSKVLQP+
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        V LDF+VHKISINKNGSA+ALVGPGGL+IMYLYGH+S+R++ T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGVLSSDSVFRLFNLSSD +QPE
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVF+LFSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSL ISWLEETFPN
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV
        LVQATDGG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRV V
Subjt:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV

Query:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ
        D +DNILG AMICELITGKLS+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SL+ MFVDKLMDERIYALH+GGIDSIILHFLPFTSQSRGQDQ
Subjt:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ

Query:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV
        TMRTPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIVGVTISQEC+VLEMKTWNLQVP+Q +NFLN GK  +  T EKNESERS+IISK+LLSGPKV
Subjt:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV

Query:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH
        VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ   L+EAQ+KLLKV GKQ+LLEDRIE AIKLHN LEER+H
Subjt:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH

Query:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK
        RLKNLPGAHKRPLSKAEREFKSTLDHF GVE+DALHTSIDTLTARLRRY NSSKNNNLVN QQ K++RRNT VQGSQISQLKSSL+KLSLLNAEN KKVK
Subjt:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK

Query:  LVESTIKSKERNRC
        LVESTIKSKE NRC
Subjt:  LVESTIKSKERNRC

XP_023518771.1 nuclear pore complex protein NUP88-like [Cucurbita pepo subsp. pepo]

0.0

87.47

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYN D NE DS   RS TPKLD DWVPL+THPVFTAA A D+  +VSPPLR+LL SDGASRL+FWD T LC+HRISIRLGEPEPTSVLAASPSKVLQPD
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        V LDFVVHKISINKNGSA+ALVGPGGL+IMYLYGH+S+R++ T+ICRTVRVGPQIY G HDVIRTLQVSWHPYS+FHLGVLSSDSVFRLFNLS+D +QPE
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSL ISWLEETFPN
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV
        LVQATDGG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRV V
Subjt:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV

Query:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ
        D +DNILG AMICELITGKLS+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SL+ MFVDKLMDERIYALH+GGIDSIILHFLPFTSQSRGQDQ
Subjt:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ

Query:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV
        TM+TPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIVGVTISQEC+VLEMKTWNLQVP+Q +NFLN GK  +  T EKNESERS+IISK+LLSGPKV
Subjt:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV

Query:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH
        VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ A L+EAQ+KLLKV GKQ+LLEDRIERAIKLHN LEER++
Subjt:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH

Query:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK
        RLKNLPGAHKRPLSKAEREFKSTLDHF GVE+DALHTSIDTLTARLRRY NSSKNNNLVN QQ K++RRNT VQGSQISQLKSSL+KLSLLNAEN KKVK
Subjt:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK

Query:  LVESTIKSKERNRC
        LVESTIKSKE NRC
Subjt:  LVESTIKSKERNRC

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DWB9 nuclear pore complex protein NUP88

0.0

100

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Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPEQ
        VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPEQ
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPEQ

Query:  EYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPNL
        EYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPNL
Subjt:  EYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPNL

Query:  VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVD
        VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVD
Subjt:  VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVD

Query:  ADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQT
        ADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQT
Subjt:  ADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQT

Query:  MRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVVLL
        MRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVVLL
Subjt:  MRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVVLL

Query:  PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLK
        PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLK
Subjt:  PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLK

Query:  NLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKLVE
        NLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKLVE
Subjt:  NLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKLVE

Query:  STIKSKERNRC
        STIKSKERNRC
Subjt:  STIKSKERNRC

A0A6J1FTH0 nuclear pore complex protein NUP88-like

0.0

87.35

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYN D NE DS   RS TPK D DWVPL+THPVFTAA A D+G +VSPPLR+LL SDGASRL+FWD T LC+HRISIRLGEPEPTSVLAASPSKVLQPD
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        V LDFVVHKISINKNGSA+ALVGPGGL+IMYLYGH+S+R++ T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGVLSSDSVFRLFNLSSD +QPE
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSL ISWLEETFPN
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV
        LVQAT GG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRV V
Subjt:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV

Query:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ
        D +DNILG AMICE ITGKLS+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SL+ MFVDKLMDERIYALH+GGIDSIILHFLPFTSQSRGQDQ
Subjt:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ

Query:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV
        TM+TPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIVGVTISQEC+VLEMKTWNLQVP+Q +NFLN  K  +  T EKNESERS+IISK+LLSGPKV
Subjt:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV

Query:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH
        VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ   L+EAQ+KLLKV GKQ+LLEDRIERAIKLHN LEER+H
Subjt:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH

Query:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK
        RLKNLPGAHKRPLSKAEREFKSTLDHF GVE+DALHTSIDTLTARLRRY NSSKNNNLVN QQ K++RRNT VQGSQISQLKSSL+KLSLLNAEN KKVK
Subjt:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK

Query:  LVESTIKSKERNRC
        LVESTIKSKE NRC
Subjt:  LVESTIKSKERNRC

A0A6J1GXA7 nuclear pore complex protein NUP88-like

0.0

85.61

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYNFD NE DS   RS  PKLD DWVPL THPVFT +A  D+GG+ +PPLRNLLA DGASRL+FWD T LC+HRISIRLGEPEPTSVLAASPSKVLQPD
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        V+LDFVVHKISINKNGSALALVGPGGL IM+LYGH+S+R+N T+ICRTVRVGPQIYYGGHDVIRTLQVSWHPYS+FHLG+LSSDSVFRLFNLSSDI+QPE
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYY+QPVEPGQS NATSICPV FSFGGDHLWDKFSVFVLFSDGSIYILCPV+PFKS Y WESILEIYNDAQS GLKSAN  A+SNSSL ISWLEETFPN
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV
        LV+A DGG M VI+AHPCALFDAS+ALQGPL RACNNG+E D SIKGAECEG AVSLLYNLISKDSVLVTAWSGGQLQIDALADE+QPVWN+GS PRVRV
Subjt:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV

Query:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ
        D +DNILGL MICELITGKLSKVKLDQPLDHTVW G PPPLLRLAIVDLALPKKMERDSL+TMFVDKLMD+RI+ALH+GGIDSIILHFLPFTSQSRGQD 
Subjt:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ

Query:  TMRTPSVHPVLNTC-QGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSV--MTEEKNESERSKIISKDLLSGPK
         MRTPSVH VLNTC QGDTS+PFPLCGFASLSDSFGYSWIVGVT SQEC+VLEMKTWNL VP+QV+NFLN G+S   +T EK+ESERS+IISKDLL GPK
Subjt:  TMRTPSVHPVLNTC-QGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSV--MTEEKNESERSKIISKDLLSGPK

Query:  VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERL
        VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAH+VYY LK  GP+LKRL DDQ   L+EAQ+KLLKVEGKQQ+L+DRIE AIKLHN LEER+
Subjt:  VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERL

Query:  HRLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKV
        HRLKNLPGAHK+PLSKAEREFKSTLDHF GVELDAL  S+DT+TARLRR+ NSSKNNN   NQQQKMYRR+TYVQGSQISQLKSSL+KLSLLNAENTKKV
Subjt:  HRLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKV

Query:  KLVESTIKSKERN
        KLVES IKSKERN
Subjt:  KLVESTIKSKERN

A0A6J1J9F4 nuclear pore complex protein NUP88-like isoform X1

0.0

85.73

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYNFD NE DS   RSP PKLD DWVPL THPVFT +A  D+GG+ +PPLRNLLA DGASRL+FWD T LC+HRISIRLGEPEPTSVLAASPSKVLQPD
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRE-NTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        V+LDFVVHKISINKNGSALALVGPGGL IM+LYGH+S+R+ NT+ICR VRVGPQIYYGGHDVIR LQVSWHPYS+FHLG+LSSDSVFRLFNLSSDI+QPE
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRE-NTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYYLQPVEPGQS NATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPV+PFKS Y WESILEIYNDAQS GLKSAN  A+SNSSL ISWLEETFPN
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV
        LV+A DGG M VI+ HPCALFDAS+ALQGPLRRACNNG+E D SIKGAECEG AVSLLYNLISKDSVLVTAWSGGQLQIDALADE+QPVWN+GSPPRVRV
Subjt:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV

Query:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ
        D +DNILGL MICELITGKLSKVKLDQPLDHTVW G PPPLLRLAIVDLALPKKMERDSL+TMFVDKLMD+RI+ALH+GGIDSIILHFLPFTSQSRGQD 
Subjt:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ

Query:  TMRTPSVHPVLNTC-QGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSV--MTEEKNESERSKIISKDLLSGPK
         MRTPSVHPVLNTC QGDTS+PFPLCGFASLSDSFGYSWIVGVT SQEC+VLEM+TWNL VP+QV+NFLN G+S   +T EK+ESERS+IISKDLL GPK
Subjt:  TMRTPSVHPVLNTC-QGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSV--MTEEKNESERSKIISKDLLSGPK

Query:  VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERL
        VVLLPQSSSNMRSVTADSIEG SMLHQYFKLFHENYVEYAH+VYY LK  GP+LKRL DDQ   L+EAQ+KLLKVEGKQQ L+DRIE AIKLHN LEER+
Subjt:  VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERL

Query:  HRLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKV
        HRLKNLPGAHK+PLSKAEREFKSTLDHF GVELDAL  S+DT+TARLRRY NSSKNNN   NQQQKMYRR+TYVQGSQISQLKSSL+KLSLLNA+NTKKV
Subjt:  HRLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKV

Query:  KLVESTIKSKERN
        KLVES IKSKERN
Subjt:  KLVESTIKSKERN

A0A6J1JXJ0 nuclear pore complex protein NUP88-like

0.0

87.47

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD
        MRYN D NE DS   RS TPKLD DWVPL+THPVFTAA A D+G +VSPPLR+LL SDGASRL+FWD T LC+HRISIRLGEPEPTSVLAASPSKVLQP+
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPD

Query:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        V LDF+VHKISINKNGSA+ALVGPGGL+IMYLYGH+S+R++ T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGVLSSDSVFRLFNLSSD +QPE
Subjt:  VKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSREN-TLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVF+LFSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSL ISWLEETFPN
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV
        LVQATDGG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRV V
Subjt:  LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRV

Query:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ
        D +DNILG AMICELITGKLS+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SL+ MFVDKLMDERIYALH+GGIDSIILHFLPFTSQSRGQDQ
Subjt:  DADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQ

Query:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV
        TMRTPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIVGVTISQEC+VLEMKTWNLQVP+Q +NFLN GK  +  T EKNESERS+IISK+LLSGPKV
Subjt:  TMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVMTEEKNESERSKIISKDLLSGPKV

Query:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH
        VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ   L+EAQ+KLLKV GKQ+LLEDRIE AIKLHN LEER+H
Subjt:  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLH

Query:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK
        RLKNLPGAHKRPLSKAEREFKSTLDHF GVE+DALHTSIDTLTARLRRY NSSKNNNLVN QQ K++RRNT VQGSQISQLKSSL+KLSLLNAEN KKVK
Subjt:  RLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVK

Query:  LVESTIKSKERNRC
        LVESTIKSKE NRC
Subjt:  LVESTIKSKERNRC

SwissProt top hits

e value

%identity

Alignment

Q9FFK6 Nuclear pore complex protein NUP88

1.1e-267

57.6

Show/hide

Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPL-RNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQP
        M++NF++ E      RSPTPK    WVPLQ+HPVF +  ++     VS    RN +A DG SR+++WD     +HR+S+RLGEPEP+SVLAA PSKV+QP
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPL-RNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQP

Query:  DVKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        D+++ F V KISINK+GSA+ L G  G+ +MYL+G  S  E+ +ICR V +G +IY      I  LQ SWHP SD HLG+LSSD+VFRLF+LSSD   PE
Subjt:  DVKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYYLQP EPG+S  A+SI P DFSFGGDHLWD+F+VF+LF+DGSIYILCPV+PF S YKWES++EIYNDA  +G+KS+NS A+SNSSL I WLE TFP+
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LV-QATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVR
        L  Q T G  + V+ A P AL DASLALQGPL +A +   + D +++ AEC+GRAVSLLYNL+SKDS+LVTAWS GQLQ+DAL DEIQPVW  G+  R+R
Subjt:  LV-QATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVR

Query:  VDADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQD
        +++ + I G+AMICE    +L     + PLDHTVW GHPPPLLRLA+VDLALPK  E  SLVT+F D L+ ERIY+LH GGIDS +LH LPFTSQ+ G+D
Subjt:  VDADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQD

Query:  QTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVV
        + ++TPSVH VL+TCQ + S   PL GF  LSDSFGYSWIV V  S EC+V EMKTW+L +PI V+       S +  EK E E S IISK+LL+GPK+ 
Subjt:  QTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVV

Query:  LLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHR
        + P +  N RS  A+S+EGRS+L  Y KLFHENY+EYAH V++ L+H  P LKR+IDDQH  L EA +K+ KVE  Q  LE RI++AI+ H+ LE+ L R
Subjt:  LLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHR

Query:  LKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKL
        L++LPG HK+PL++AE +FKS LD +AGVE+DAL +SI+TL AR+++    S    +V   Q+K Y +   +Q +Q+SQL+S+L KLSL+N++N+KKVK+
Subjt:  LKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKL

Query:  VESTIKSKE
        VES +KS+E
Subjt:  VESTIKSKE

Arabidopsis top hits

e value

%identity

Alignment

AT5G05680.1 nuclear pore complex protein-related

7.8e-269

57.6

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Query:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPL-RNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQP
        M++NF++ E      RSPTPK    WVPLQ+HPVF +  ++     VS    RN +A DG SR+++WD     +HR+S+RLGEPEP+SVLAA PSKV+QP
Subjt:  MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPL-RNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQP

Query:  DVKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE
        D+++ F V KISINK+GSA+ L G  G+ +MYL+G  S  E+ +ICR V +G +IY      I  LQ SWHP SD HLG+LSSD+VFRLF+LSSD   PE
Subjt:  DVKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPE

Query:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN
        QEYYLQP EPG+S  A+SI P DFSFGGDHLWD+F+VF+LF+DGSIYILCPV+PF S YKWES++EIYNDA  +G+KS+NS A+SNSSL I WLE TFP+
Subjt:  QEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPN

Query:  LV-QATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVR
        L  Q T G  + V+ A P AL DASLALQGPL +A +   + D +++ AEC+GRAVSLLYNL+SKDS+LVTAWS GQLQ+DAL DEIQPVW  G+  R+R
Subjt:  LV-QATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVR

Query:  VDADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQD
        +++ + I G+AMICE    +L     + PLDHTVW GHPPPLLRLA+VDLALPK  E  SLVT+F D L+ ERIY+LH GGIDS +LH LPFTSQ+ G+D
Subjt:  VDADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQD

Query:  QTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVV
        + ++TPSVH VL+TCQ + S   PL GF  LSDSFGYSWIV V  S EC+V EMKTW+L +PI V+       S +  EK E E S IISK+LL+GPK+ 
Subjt:  QTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVV

Query:  LLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHR
        + P +  N RS  A+S+EGRS+L  Y KLFHENY+EYAH V++ L+H  P LKR+IDDQH  L EA +K+ KVE  Q  LE RI++AI+ H+ LE+ L R
Subjt:  LLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHR

Query:  LKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKL
        L++LPG HK+PL++AE +FKS LD +AGVE+DAL +SI+TL AR+++    S    +V   Q+K Y +   +Q +Q+SQL+S+L KLSL+N++N+KKVK+
Subjt:  LKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLKKLSLLNAENTKKVKL

Query:  VESTIKSKE
        VES +KS+E
Subjt:  VESTIKSKE

Sequences

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CDS sequence

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ATGAGGTACAATTTTGACGACAACGAACCTGATTCCGGCCACCATCGATCTCCGACTCCAAAACTAGACGCCGATTGGGTCCCTCTACAAACGCACCCCGTTTTCACCGC
CGCCGCCGCCGCCGATTTTGGCGGCACCGTTTCTCCGCCTCTAAGAAACCTCCTTGCGTCGGACGGCGCCTCCCGGCTCTTTTTCTGGGACTGCACCATACTCTGCGTTC
ACCGGATTTCCATACGCCTCGGTGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCCAAAGTACTGCAACCGGATGTGAAACTCGACTTTGTTGTTCACAAGATT
TCTATCAATAAGAATGGATCAGCACTGGCCCTTGTGGGTCCAGGTGGTTTGTTCATAATGTATCTCTATGGCCACACTTCTTCCAGAGAGAACACGCTCATCTGTAGAAC
TGTTAGAGTTGGTCCGCAGATCTACTACGGTGGCCACGATGTCATACGCACGCTACAAGTTTCTTGGCACCCTTATAGTGACTTCCATCTGGGAGTCCTTTCTTCTGATT
CTGTTTTCAGGCTTTTTAATCTGTCTTCAGATATTTTGCAACCAGAGCAAGAGTATTACCTGCAGCCAGTGGAGCCTGGTCAATCCATAAATGCCACATCAATCTGCCCT
GTTGATTTTTCGTTTGGGGGAGACCACTTGTGGGACAAATTTAGTGTGTTTGTTTTATTCAGCGATGGTTCAATTTACATCCTCTGCCCTGTTATTCCATTTAAAAGCAC
TTACAAGTGGGAATCTATATTGGAGATTTATAACGATGCTCAGTCTTTTGGGCTAAAATCAGCCAATTCAAAAGCTATCAGTAATTCCAGTCTTCCAATCTCTTGGTTGG
AAGAAACTTTTCCAAATTTAGTTCAAGCAACAGATGGAGGAGGCATGCCTGTGATTATGGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGGGCCTTTG
AGGAGAGCGTGCAATAATGGAGATGAAGGAGATACATCAATTAAAGGTGCAGAATGTGAAGGCCGTGCAGTAAGTTTACTATATAATCTAATCAGCAAAGACTCAGTTCT
AGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGACGCCCTTGCTGATGAAATTCAGCCTGTCTGGAATCTTGGTAGTCCCCCACGTGTACGTGTTGATGCTGATGACA
ACATCCTTGGTCTTGCTATGATATGTGAATTGATCACAGGGAAGCTCTCCAAGGTGAAGCTTGATCAACCACTTGATCATACAGTTTGGTCGGGGCACCCTCCCCCTTTG
TTGAGGCTGGCTATTGTCGATCTGGCCCTTCCGAAGAAAATGGAGAGAGATTCTCTTGTCACGATGTTCGTCGATAAACTCATGGACGAAAGAATTTATGCTCTTCACAG
TGGAGGCATAGACTCGATTATACTGCATTTTCTCCCATTCACAAGTCAAAGCCGAGGACAGGACCAGACCATGAGAACTCCCTCTGTGCACCCTGTACTGAATACCTGCC
AGGGAGACACTTCCGACCCATTTCCGCTTTGTGGTTTTGCCTCATTGTCCGATTCATTCGGATATTCCTGGATTGTGGGAGTCACCATTTCTCAAGAATGCGTTGTTCTA
GAGATGAAGACTTGGAACCTTCAAGTCCCAATTCAGGTTAACAATTTCCTAAACGGTGGAAAATCAGTCATGACTGAAGAAAAAAATGAAAGTGAGAGATCTAAAATCAT
AAGCAAAGATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAGTCCTCATCAAATATGCGTTCCGTGACTGCTGATTCCATCGAAGGTCGGTCCATGCTTCATCAAT
ACTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACATACGGTGTACTACGGGCTAAAGCATCAGGGGCCCAAGTTGAAGAGGTTAATTGACGATCAGCATGCTCAT
TTAAAAGAGGCACAGAAAAAGCTCTTAAAAGTAGAGGGGAAACAGCAATTATTGGAGGACAGGATAGAACGTGCAATCAAACTGCACAATGATCTGGAAGAGCGCTTACA
TCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCTACACTTGACCACTTTGCGGGTGTTGAGTTGGATGCTTTACATA
CTTCGATCGACACGCTAACTGCAAGACTAAGGAGGTACCCAAATTCTTCTAAGAACAACAATCTAGTAAACAACCAACAACAGAAAATGTACAGGAGAAACACTTATGTC
CAAGGCTCTCAGATCTCTCAACTCAAATCATCGCTCAAGAAACTCTCCCTCCTCAATGCTGAGAACACTAAGAAGGTTAAGCTAGTTGAATCTACGATAAAAAGCAAGGA
AAGGAACAGATGCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGASRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKI
SINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDILQPEQEYYLQPVEPGQSINATSICP
VDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPNLVQATDGGGMPVIMAHPCALFDASLALQGPL
RRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVDADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPL
LRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVL
EMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAH
LKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYV
QGSQISQLKSSLKKLSLLNAENTKKVKLVESTIKSKERNRC

MC09g1118 (gene) of Bitter gourd (Dali-11) v1 genome