; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g1149 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g1149
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationMC09:17513834..17517181
RNA-Seq ExpressionMC09g1149
SyntenyMC09g1149
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600024.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.12e-17088.52Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA
        M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  TSS T ERRIVKK VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG 
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ

Query:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD
        DK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQ EN KMV+KRYGCKWKYIHFKGERVRV+RDGWDEDD
Subjt:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD

XP_022139301.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]4.31e-197100Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL
        MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD

Query:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER
        KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER
Subjt:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER

XP_022139303.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Momordica charantia]5.04e-19398.89Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL
        MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD

Query:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER
        K   IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER
Subjt:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER

XP_022942519.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata]2.04e-17088.52Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA
        M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  T S T ERRIVKK VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG 
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ

Query:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD
        DK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN KMV+KRYGCKWKYIHFKGERVRV+RDGWDEDD
Subjt:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD

XP_023541595.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo]1.44e-17088.52Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA
        M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  TSS T ERRIVKK VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG 
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ

Query:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD
        DK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN K+V+KRYGCKWKYIHFKGERVRV+RDGWDEDD
Subjt:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD

TrEMBL top hitse value%identityAlignment
A0A5A7UD21 Pentatricopeptide repeat-containing protein1.84e-16886.67Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL
        M V  G+S GFD LVPK DCI   NK  FR AS  C HNQA QP TS  T ERR+VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG L
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD

Query:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE
        K+IEIFADMEELGVKPDEDTVRR+ RAFQKLGQEENRKMV+KRY C+WKYIHFKGERVRV++DGWDEDD+
Subjt:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDE

A0A6J1CC95 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.09e-197100Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL
        MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD

Query:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER
        KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER
Subjt:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER

A0A6J1CFD3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X22.44e-19398.89Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL
        MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGAL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQD

Query:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER
        K   IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER
Subjt:  KVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER

A0A6J1FWG3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic9.88e-17188.52Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA
        M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  T S T ERRIVKK VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG 
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ

Query:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD
        DK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN KMV+KRYGCKWKYIHFKGERVRV+RDGWDEDD
Subjt:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD

A0A6J1K6G2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic4.69e-16987.78Show/hide
Query:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA
        M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  TSS T ERRIVKK VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG 
Subjt:  MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGA

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMI+LYDHHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQ

Query:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD
        DK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN K V+KRYGCKWKYIHFK ERVRV+RDGWDEDD
Subjt:  DKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDD

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic3.5e-9377.93Show/hide
Query:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

Q8LG95 Pentatricopeptide repeat-containing protein At4g211906.1e-4546.12Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYGAL+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY SLL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY-GCKWKYIHFKGERVRVKRDG
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  V + F KL  ++  + + K+Y   +W++ + KG RV+VK   
Subjt:  AESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY-GCKWKYIHFKGERVRVKRDG

Query:  WDEDDE
         +E  E
Subjt:  WDEDDE

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein2.5e-9477.93Show/hide
Query:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein2.5e-9477.93Show/hide
Query:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein2.5e-9477.93Show/hide
Query:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein2.5e-9477.93Show/hide
Query:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF++L QEENRK++ +RY  ++K
Subjt:  YDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein4.3e-4646.12Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYGAL+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY SLL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY-GCKWKYIHFKGERVRVKRDG
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  V + F KL  ++  + + K+Y   +W++ + KG RV+VK   
Subjt:  AESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY-GCKWKYIHFKGERVRVKRDG

Query:  WDEDDE
         +E  E
Subjt:  WDEDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTTACCGTGGAACCTCAATTGGTTTTGACACCCTCGTGCCAAAGAAAGATTGCATTTGCAATTTCAACAAATTGACATTTAGAGCCGCTAGTTTCAAGTGTTC
CCACAACCAAGCCGTGCAGCCGTTTACTAGTTCCCCCACAATTGAGAGGCGTATTGTGAAGAAGGTTGGGAAGGAGGCGCATCATTTATGGAAGAAAAGAGATTCTGCTG
GCTCTGGGCAAAAGGCCCTTAATCTTGTTAGAATTGTCTCCCAATGTCCTAATGAAAAAGAAGCTGTCTATGGAGCGTTAAATAAGTGGATAGCTTGGGAGACAGAGTTT
CCGTTGATTGCGGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGAGTCATTCAAGTGGCGAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAAT
GGGAACATATGACTCCCTTTTACTGGCATTCGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACGCATACACGTTCCATCTCTAAGC
AGTTATTTTCTAGGATGATCTCTTTGTACGATCATCATGACTTGCAAGATAAGGTTATCGAGATATTTGCAGACATGGAGGAGTTAGGTGTAAAACCAGATGAAGATACT
GTTAGAAGAGTCGCACGTGCCTTTCAGAAATTAGGTCAAGAAGAAAACCGCAAAATGGTCCATAAAAGATATGGCTGCAAATGGAAATATATACACTTTAAAGGTGAGAG
GGTTAGAGTGAAAAGAGATGGATGGGATGAAGATGATGAAAGATGA
mRNA sequenceShow/hide mRNA sequence
CTCCATTAACTCTGCCCAATTCACTCTGCGAGATAAGACGCTCGCTCCACTGTTTCTTTTCGACCCCAAAAGAGAAATCCCGAAACCAAGTTTTTGCAGAGCCCTTCTTC
CTTCTGGATGAATCATCCCCATTTTGCGGGAGGCCAATTTCTTGATAATACTTGGTACCCAATTCACAGAGCGTTGAATTAAGAAAAATCTGATGTCGGTTTACCGTGGA
ACCTCAATTGGTTTTGACACCCTCGTGCCAAAGAAAGATTGCATTTGCAATTTCAACAAATTGACATTTAGAGCCGCTAGTTTCAAGTGTTCCCACAACCAAGCCGTGCA
GCCGTTTACTAGTTCCCCCACAATTGAGAGGCGTATTGTGAAGAAGGTTGGGAAGGAGGCGCATCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCCC
TTAATCTTGTTAGAATTGTCTCCCAATGTCCTAATGAAAAAGAAGCTGTCTATGGAGCGTTAAATAAGTGGATAGCTTGGGAGACAGAGTTTCCGTTGATTGCGGCTGCT
AAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGAGTCATTCAAGTGGCGAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACTCCCT
TTTACTGGCATTCGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACGCATACACGTTCCATCTCTAAGCAGTTATTTTCTAGGATGA
TCTCTTTGTACGATCATCATGACTTGCAAGATAAGGTTATCGAGATATTTGCAGACATGGAGGAGTTAGGTGTAAAACCAGATGAAGATACTGTTAGAAGAGTCGCACGT
GCCTTTCAGAAATTAGGTCAAGAAGAAAACCGCAAAATGGTCCATAAAAGATATGGCTGCAAATGGAAATATATACACTTTAAAGGTGAGAGGGTTAGAGTGAAAAGAGA
TGGATGGGATGAAGATGATGAAAGATGAATCGAACTGAAAAAAAAAGAAGAGATTTGTTATTGAAACTACTGAAGAAGCAGAGATGGCTGAACTCTAGCATGGACAAGTT
CATGAGGTACATATCTATCGGTCCCGATTATATGCATTTAAGCAAGCTGGAACCTAGATTTTCAGTCTTATTTTTCTCCTCTACGCTACAGAGATAATACAAACATTGTA
AGATTTAAATAGGTAGGAAATGAAAACAGAAAATAGTGTATATGAAGTTGTTTTCTGGAAGCTTGATTCTCTTTCAGGCTTCGAGGTAGGAAACGAAACAGCAAACGGGG
TCTGAAACAAGTAGATGTTCATGGGGGACGAACGACCCATTTGTCGAACTTGGATAAGATATGGTGTGCAGGTTGAGTATATTTCACATCAAGCTTGAAATCTTCAAACT
GAAGCACCATCAAGTGTGGACAAAGCTTTTGATCAAATCAGTGGTAGAATTATGTAAAAAGAAAAGTGGACAGAAAGTTTGATACAAGATGGGATTTGAACAATCCATCC
CAACAAACAAAAAAAGAAAGTGATCTTAAATAATTGAGAACCAGTATTTTAATAAATGTGAAGATCCAATCCATGGCATCAGAATTCAAACAGAAGTGGAGATCCAGACC
CAGCTGGATGAGGATGCCATTCCTGTCAAGTACAGAGGACAGTCCCATCGCTCCAACAAAAAACTATTCATAAAACGTACCATATGGGCATGCCCATGCTTCCACCACGT
ATGTATGCTGATCTGTAAACTTTTAATATTAGTATTTGTTCTATTTTAGTGTAAGCTTTCTAAATGTCTATTATTTTAGTTTCTGTTATTTTAATTTTAACAAATTAATA
ACATGGTTTCATGTATTTGTACCAAAATGTTATCGTTAACCTGTATCTAAACTACATAAGTTGAAATTAAATATTGGGCAAGCCAATTTTAGGTGGAA
Protein sequenceShow/hide protein sequence
MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEF
PLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDT
VRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER