; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g1160 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g1160
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionC2H2-type domain-containing protein
Genome locationMC09:17666241..17666648
RNA-Seq ExpressionMC09g1160
SyntenyMC09g1160
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600035.1 Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia]3.98e-4057.55Show/hide
Query:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFR-PPTPSPTVKSATF--NG
        + E H LWRQI N  +  +PS   +E AFAEDTAAA VWPPRSY+CNFCMRQFRSAQALGGHMNVHRRDRARLQN+P+R F   PTP+  +++  F    
Subjt:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFR-PPTPSPTVKSATF--NG

Query:  HDEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL
           DS +C+K    R+KVCVS        +++LDLEL+L
Subjt:  HDEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL

XP_004151402.2 zinc finger protein 11 [Cucumis sativus]2.05e-3653.62Show/hide
Query:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPF--RPPTPSPTVKSATFNGH
        + + H LWRQI    S      WDQE AFA+D AA  VWPPRSY+C FCMRQFRSAQALGGHMNVHRRDRA+LQN P+RPF  +P TP+  + +  F+  
Subjt:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPF--RPPTPSPTVKSATFNGH

Query:  DEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL
        + DS        K +    SS S+SS+ +  LDLEL+L
Subjt:  DEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL

XP_008461701.1 PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]3.96e-3352.78Show/hide
Query:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRP--FRPPTPSPTVKSATFNGH
        + E H +WRQI    S      WDQE AFA+D AA  VWPPRSY+C FCMRQFRSAQALGGHMNVHRRDRA+LQN P+R   F  PTP+  + +  F+  
Subjt:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRP--FRPPTPSPTVKSATFNGH

Query:  DEDSYNCVKNNN------KRSKVCVSSFSASSSLDQELDLELRL
                KNNN      K+ K+  SS S+S+S +  LDLEL+L
Subjt:  DEDSYNCVKNNN------KRSKVCVSSFSASSSLDQELDLELRL

XP_022988302.1 zinc finger protein 10-like [Cucurbita maxima]3.98e-4057.55Show/hide
Query:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFR-PPTPSPTVKSATF--NG
        + E H LWRQI N  +  +PS   +E AFAEDTAAA VWPPRSY+CNFCMRQFRSAQALGGHMNVHRRDRARLQN+P+R F   PTP+  +++  F    
Subjt:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFR-PPTPSPTVKSATF--NG

Query:  HDEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL
           DS +C+K    R+KVCVS        +++LDLEL+L
Subjt:  HDEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL

XP_023542190.1 zinc finger protein 10-like [Cucurbita pepo subsp. pepo]1.97e-4057.55Show/hide
Query:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFR-PPTPSPTVKSATF--NG
        + E H LWRQI N  +  +PS   +E AFAEDTAAA VWPPRSY+CNFCMRQFRSAQALGGHMNVHRRDRARLQN+P+R F   PTP+  +++  F    
Subjt:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFR-PPTPSPTVKSATF--NG

Query:  HDEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL
        +  DS +C+K    R+KVCVS        +++LDLEL+L
Subjt:  HDEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ3 C2H2-type domain-containing protein9.91e-3753.62Show/hide
Query:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPF--RPPTPSPTVKSATFNGH
        + + H LWRQI    S      WDQE AFA+D AA  VWPPRSY+C FCMRQFRSAQALGGHMNVHRRDRA+LQN P+RPF  +P TP+  + +  F+  
Subjt:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPF--RPPTPSPTVKSATFNGH

Query:  DEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL
        + DS        K +    SS S+SS+ +  LDLEL+L
Subjt:  DEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL

A0A1S3CGM6 transcriptional regulator SUPERMAN-like1.92e-3352.78Show/hide
Query:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRP--FRPPTPSPTVKSATFNGH
        + E H +WRQI    S      WDQE AFA+D AA  VWPPRSY+C FCMRQFRSAQALGGHMNVHRRDRA+LQN P+R   F  PTP+  + +  F+  
Subjt:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRP--FRPPTPSPTVKSATFNGH

Query:  DEDSYNCVKNNN------KRSKVCVSSFSASSSLDQELDLELRL
                KNNN      K+ K+  SS S+S+S +  LDLEL+L
Subjt:  DEDSYNCVKNNN------KRSKVCVSSFSASSSLDQELDLELRL

A0A4D8ZQA4 C2H2-type domain-containing protein5.00e-2649.23Show/hide
Query:  LWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRPPTPSPTVKSATFNGHDEDSYNCV
        +W Q     +  RP  + +E+          VWPPRSY C FC RQFRSAQALGGHMNVHRRDRA+L+  P  P  PP           NG      NC 
Subjt:  LWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRPPTPSPTVKSATFNGHDEDSYNCV

Query:  KNNNKRSKVCVSSFSASSSLDQELDLELRL
        + N KR K+C SSFSA    DQE+DLELRL
Subjt:  KNNNKRSKVCVSSFSASSSLDQELDLELRL

A0A5A7UA35 Transcriptional regulator SUPERMAN-like1.92e-3352.78Show/hide
Query:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRP--FRPPTPSPTVKSATFNGH
        + E H +WRQI    S      WDQE AFA+D AA  VWPPRSY+C FCMRQFRSAQALGGHMNVHRRDRA+LQN P+R   F  PTP+  + +  F+  
Subjt:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRP--FRPPTPSPTVKSATFNGH

Query:  DEDSYNCVKNNN------KRSKVCVSSFSASSSLDQELDLELRL
                KNNN      K+ K+  SS S+S+S +  LDLEL+L
Subjt:  DEDSYNCVKNNN------KRSKVCVSSFSASSSLDQELDLELRL

A0A6J1JCP1 zinc finger protein 10-like1.92e-4057.55Show/hide
Query:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFR-PPTPSPTVKSATF--NG
        + E H LWRQI N  +  +PS   +E AFAEDTAAA VWPPRSY+CNFCMRQFRSAQALGGHMNVHRRDRARLQN+P+R F   PTP+  +++  F    
Subjt:  LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFR-PPTPSPTVKSATF--NG

Query:  HDEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL
           DS +C+K    R+KVCVS        +++LDLEL+L
Subjt:  HDEDSYNCVKNNNKRSKVCVSSFSASSSLDQELDLELRL

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 102.0e-2053.04Show/hide
Query:  RPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARL-QNDPSRPFRPPTPSPTVKS--ATFNGHDEDSYNCVKNNN----K
        + SSW +E AFAED AA ++WPPRSYTC+FC R+F+SAQALGGHMNVHRRDRARL Q D    F   + SP   S   + N H+   Y  V N      K
Subjt:  RPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARL-QNDPSRPFRPPTPSPTVKS--ATFNGHDEDSYNCVKNNN----K

Query:  RSKVCVSSFSASSSL
            CV   S+SSSL
Subjt:  RSKVCVSSFSASSSL

Q38895 Transcriptional regulator SUPERMAN1.6e-1455Show/hide
Query:  YSQTRPSSW---DQETAFAE-DTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRA--RLQNDPSRPFRPPTPSP
        Y + R S W   D +    + D      WPPRSYTC+FC R+FRSAQALGGHMNVHRRDRA  RLQ  PS    P  P P
Subjt:  YSQTRPSSW---DQETAFAE-DTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRA--RLQNDPSRPFRPPTPSP

Q9LHS9 Probable transcriptional regulator RABBIT EARS5.2e-1350Show/hide
Query:  TRPSS-------WDQETAFAE----DTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRPPTPSP
        TRPSS       + +E AFA           +WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRARL+     P      +P
Subjt:  TRPSS-------WDQETAFAE----DTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRPPTPSP

Q9SLB8 Zinc finger protein 114.7e-1451.16Show/hide
Query:  WPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRP----------PTPSPTVKSATFNGHDEDSYNCVKNNNKRSK
        WPP++YTC+FC R+FRSAQALGGHMNVHRRDRA+L+  PS  F P          P  S +  S+T   H E S       N+RSK
Subjt:  WPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRP----------PTPSPTVKSATFNGHDEDSYNCVKNNNKRSK

Q9SR34 Transcriptional regulator TAC13.9e-0872.73Show/hide
Query:  RSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQ
        RSY C+FC+R F +AQALGGHMN+HRRDRA+L+
Subjt:  RSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQ

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 101.4e-2153.04Show/hide
Query:  RPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARL-QNDPSRPFRPPTPSPTVKS--ATFNGHDEDSYNCVKNNN----K
        + SSW +E AFAED AA ++WPPRSYTC+FC R+F+SAQALGGHMNVHRRDRARL Q D    F   + SP   S   + N H+   Y  V N      K
Subjt:  RPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARL-QNDPSRPFRPPTPSPTVKS--ATFNGHDEDSYNCVKNNN----K

Query:  RSKVCVSSFSASSSL
            CV   S+SSSL
Subjt:  RSKVCVSSFSASSSL

AT2G42410.1 zinc finger protein 113.4e-1551.16Show/hide
Query:  WPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRP----------PTPSPTVKSATFNGHDEDSYNCVKNNNKRSK
        WPP++YTC+FC R+FRSAQALGGHMNVHRRDRA+L+  PS  F P          P  S +  S+T   H E S       N+RSK
Subjt:  WPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRP----------PTPSPTVKSATFNGHDEDSYNCVKNNNKRSK

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-1555Show/hide
Query:  YSQTRPSSW---DQETAFAE-DTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRA--RLQNDPSRPFRPPTPSP
        Y + R S W   D +    + D      WPPRSYTC+FC R+FRSAQALGGHMNVHRRDRA  RLQ  PS    P  P P
Subjt:  YSQTRPSSW---DQETAFAE-DTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRA--RLQNDPSRPFRPPTPSP

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein3.4e-1569.81Show/hide
Query:  SWDQETAFAEDT---AAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRA
        SW+ + AF +DT    +   WPPRSYTCNFC R+FRSAQALGGHMNVHRRDRA
Subjt:  SWDQETAFAEDT---AAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRA

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein3.7e-1450Show/hide
Query:  TRPSS-------WDQETAFAE----DTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRPPTPSP
        TRPSS       + +E AFA           +WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRARL+     P      +P
Subjt:  TRPSS-------WDQETAFAE----DTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRPPTPSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGCCGGAACCCCACCTGCTGTGGAGGCAAATTTTCAACAACTACTCCCAAACGAGGCCGTCCAGCTGGGATCAGGAGACCGCCTTCGCCGAGGACACCGCCGCCGCCGC
CGTGTGGCCGCCCCGCTCCTACACCTGCAACTTCTGTATGCGCCAATTCCGGTCCGCCCAGGCTCTCGGTGGCCACATGAACGTTCACCGCCGGGACCGGGCCCGCCTCC
AAAACGATCCCAGCCGTCCCTTCCGGCCGCCTACGCCTTCCCCCACCGTCAAATCTGCCACCTTTAACGGTCACGATGAAGATTCTTATAATTGCGTGAAAAATAATAAT
AAGAGATCTAAAGTTTGTGTTTCTTCATTCTCTGCTTCTTCTTCTTTGGATCAGGAGCTGGACCTTGAGCTCAGACTT
mRNA sequenceShow/hide mRNA sequence
CTGCCGGAACCCCACCTGCTGTGGAGGCAAATTTTCAACAACTACTCCCAAACGAGGCCGTCCAGCTGGGATCAGGAGACCGCCTTCGCCGAGGACACCGCCGCCGCCGC
CGTGTGGCCGCCCCGCTCCTACACCTGCAACTTCTGTATGCGCCAATTCCGGTCCGCCCAGGCTCTCGGTGGCCACATGAACGTTCACCGCCGGGACCGGGCCCGCCTCC
AAAACGATCCCAGCCGTCCCTTCCGGCCGCCTACGCCTTCCCCCACCGTCAAATCTGCCACCTTTAACGGTCACGATGAAGATTCTTATAATTGCGTGAAAAATAATAAT
AAGAGATCTAAAGTTTGTGTTTCTTCATTCTCTGCTTCTTCTTCTTTGGATCAGGAGCTGGACCTTGAGCTCAGACTT
Protein sequenceShow/hide protein sequence
LPEPHLLWRQIFNNYSQTRPSSWDQETAFAEDTAAAAVWPPRSYTCNFCMRQFRSAQALGGHMNVHRRDRARLQNDPSRPFRPPTPSPTVKSATFNGHDEDSYNCVKNNN
KRSKVCVSSFSASSSLDQELDLELRL