; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g1343 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g1343
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionYae1_N domain-containing protein
Genome locationMC09:19529214..19531449
RNA-Seq ExpressionMC09g1343
SyntenyMC09g1343
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR019191 - Essential protein Yae1, N-terminal
IPR038881 - Yae1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031946.1 hypothetical protein SDJN02_05988 [Cucurbita argyrosperma subsp. argyrosperma]4.48e-10382.07Show/hide
Query:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
        GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLI+GKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EE
Subjt:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE

Query:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ
        N SKFQSLYE  NS+STADALRLF+D+I+AQ T EECVDA+T+S+TI LLKQN D+ RLG+FYGELQALLP SPAL +HLHE+Q
Subjt:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ

XP_022138890.1 uncharacterized protein LOC111009960 [Momordica charantia]7.09e-133100Show/hide
Query:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
        GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
Subjt:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE

Query:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQQILP
        NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQQILP
Subjt:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQQILP

XP_022957528.1 uncharacterized protein LOC111458903 [Cucurbita moschata]5.21e-10282.07Show/hide
Query:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
        GS V+D C+DDGSLWGGSDE LEE SDLDREW RRHDQFHTIGYRDGLI+GKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EE
Subjt:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE

Query:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ
          SKFQSLYE  NS+STADALRLF+D+I+AQ T EECVDA+T+S+TI LLKQN D GRLG+FYGELQALLPKSPAL +HLHE+Q
Subjt:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ

XP_023514282.1 uncharacterized protein LOC111778596 isoform X1 [Cucurbita pepo subsp. pepo]4.01e-10382.07Show/hide
Query:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
        GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLI+GKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EE
Subjt:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE

Query:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ
        N SKFQSLYE  NS+STADALRLF+++I+AQ T EECVDA+T+S+TI LLKQN D+ RLGKFYGELQALLP SPAL +HLHE+Q
Subjt:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ

XP_023514291.1 uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo]3.15e-10382.07Show/hide
Query:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
        GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLI+GKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EE
Subjt:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE

Query:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ
        N SKFQSLYE  NS+STADALRLF+++I+AQ T EECVDA+T+S+TI LLKQN D+ RLGKFYGELQALLP SPAL +HLHE+Q
Subjt:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ

TrEMBL top hitse value%identityAlignment
A0A5A7SUA5 Aquarius2.25e-10178.01Show/hide
Query:  MTYCLVLGSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKE
        M+  LV GSGVDD C+DDGSLWGGSDEGLEE +DLDREWQRRHDQFHTIGYRDGLI+GKEAAAQEGFN+GFKQSV +GYKLGLVRGVSSVLA LPDDLKE
Subjt:  MTYCLVLGSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKE

Query:  KLMGNEENSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ
        KL G  EN SKFQSLYE  NS+ST DALRLFN +I  Q T EE V A+TNS+T+ LLK+NPD GRLGKFY EL A LP+SPAL VHLHE++
Subjt:  KLMGNEENSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ

A0A6J1CAS2 uncharacterized protein LOC1110099603.43e-133100Show/hide
Query:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
        GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
Subjt:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE

Query:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQQILP
        NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQQILP
Subjt:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQQILP

A0A6J1H273 uncharacterized protein LOC1114589032.52e-10282.07Show/hide
Query:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
        GS V+D C+DDGSLWGGSDE LEE SDLDREW RRHDQFHTIGYRDGLI+GKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EE
Subjt:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE

Query:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ
          SKFQSLYE  NS+STADALRLF+D+I+AQ T EECVDA+T+S+TI LLKQN D GRLG+FYGELQALLPKSPAL +HLHE+Q
Subjt:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ

A0A6J1JR95 uncharacterized protein LOC111487537 isoform X23.73e-10181.52Show/hide
Query:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
        GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLI+GKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EE
Subjt:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE

Query:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ
        N SKFQSLYE  NS+STADALRLF+D+I+AQ T EE VDA+T+S+TI LLKQN D  RLG+FYGELQALLP SPAL +HLHE+Q
Subjt:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ

A0A6J1JRH1 uncharacterized protein LOC111487537 isoform X32.93e-10181.52Show/hide
Query:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE
        GS V+D C+DDGSLWGGSDEGLEE SDLDREW RRHDQFHTIGYRDGLI+GKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA LPDDLKEKL+G EE
Subjt:  GSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEE

Query:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ
        N SKFQSLYE  NS+STADALRLF+D+I+AQ T EE VDA+T+S+TI LLKQN D  RLG+FYGELQALLP SPAL +HLHE+Q
Subjt:  NSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ

SwissProt top hitse value%identityAlignment
Q9NRH1 Protein YAE1 homolog9.8e-0535.9Show/hide
Query:  LCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVL
        L Q  G      DE  +E     REWQ    +    GYRDG+ +GK    Q+GFN G+K+   +    G +RG  S L
Subjt:  LCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVL

Arabidopsis top hitse value%identityAlignment
AT1G34550.1 Protein of unknown function (DUF616)7.0e-0632.35Show/hide
Query:  SVLACLPDDLKEKLMGNEENSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLH
        +VLA LPD+L+EKL+  +E   KFQ L+   +++ST  A++ F   +    TT+E +     + T             G +  EL +LL KSP ++  L 
Subjt:  SVLACLPDDLKEKLMGNEENSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLH

Query:  ED
        +D
Subjt:  ED

AT1G34570.1 Essential protein Yae1, N-terminal4.1e-3040.83Show/hide
Query:  DGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYE
        D   +G SDE   E   LD E ++R  +FH+ GYRDG++ GKEA AQEG+N G+K+SV  GYK G+VRGVSS LA LP + +EKL+  +E   KFQ L+ 
Subjt:  DGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKFQSLYE

Query:  CTNSISTADALRLFNDEILAQDTTEECVDADTNSRTI-GLLKQNPDDGRLGKFYGELQALLPKSPALKV
          +++ST  A++ F + +  +   E+  +   +S ++ G          LG +  EL +LL KSP ++V
Subjt:  CTNSISTADALRLFNDEILAQDTTEECVDADTNSRTI-GLLKQNPDDGRLGKFYGELQALLPKSPALKV

AT3G15750.1 Essential protein Yae1, N-terminal2.6e-2941.24Show/hide
Query:  LCQDDGSLWGGSD-EGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKF
        L + D   +G SD E   E   L  E ++R  +FH+ GYRDG+++GKEA AQEG+N G+K+SV  GY+ GLVRGVSS LA LPD+L+EKL+  +E   KF
Subjt:  LCQDDGSLWGGSD-EGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGNEENSSKF

Query:  QSLYECTNSISTADALRLFNDEILA----QDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKV
        Q L+   +++ST  A++ F + +      + + EE  D+ ++S +   +    D   LG +  EL +LL KSP ++V
Subjt:  QSLYECTNSISTADALRLFNDEILA----QDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTACTGTCTGGTTTTAGGTTCTGGTGTGGATGACTTGTGCCAAGATGATGGATCTTTATGGGGTGGTTCTGATGAAGGCTTGGAGGAAATATCTGATTTG
GACAGGGAGTGGCAGAGGAGACATGACCAATTCCATACGATTGGATACCGTGATGGTTTAATCTCTGGTAAAGAAGCTGCAGCTCAAGAGGGATTTAATGTTGGC
TTCAAGCAGTCAGTCTTTATTGGGTATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGTGTGCTTGCTTGCCTTCCTGATGACTTGAAAGAGAAGCTAATGGGAAAT
GAAGAGAACAGTAGTAAATTCCAAAGCTTGTATGAATGTACGAACTCTATTTCGACAGCAGATGCGCTTAGACTATTCAATGACGAGATTTTGGCACAAGACACG
ACAGAAGAGTGTGTCGACGCAGATACTAATTCCCGAACGATAGGTTTGCTGAAGCAAAATCCAGATGATGGACGTCTAGGGAAGTTCTATGGAGAGCTTCAAGCA
CTTTTACCAAAATCACCTGCTCTGAAAGTTCATCTACATGAAGACCAGCAGATTTTGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTACTGTCTGGTTTTAGGTTCTGGTGTGGATGACTTGTGCCAAGATGATGGATCTTTATGGGGTGGTTCTGATGAAGGCTTGGAGGAAATATCTGATTTG
GACAGGGAGTGGCAGAGGAGACATGACCAATTCCATACGATTGGATACCGTGATGGTTTAATCTCTGGTAAAGAAGCTGCAGCTCAAGAGGGATTTAATGTTGGC
TTCAAGCAGTCAGTCTTTATTGGGTATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGTGTGCTTGCTTGCCTTCCTGATGACTTGAAAGAGAAGCTAATGGGAAAT
GAAGAGAACAGTAGTAAATTCCAAAGCTTGTATGAATGTACGAACTCTATTTCGACAGCAGATGCGCTTAGACTATTCAATGACGAGATTTTGGCACAAGACACG
ACAGAAGAGTGTGTCGACGCAGATACTAATTCCCGAACGATAGGTTTGCTGAAGCAAAATCCAGATGATGGACGTCTAGGGAAGTTCTATGGAGAGCTTCAAGCA
CTTTTACCAAAATCACCTGCTCTGAAAGTTCATCTACATGAAGACCAGCAGATTTTGCCATAACTCATCATTGATACTTCTGCTGAGGAGAAATATTTTGTTTGT
AAAATTTTCAATGCAACTTTTGTAGATTTAGCATTTGTTACGTTGAAATTTTGGATATTGACCTTGCCTGTATTTGTTTCAATTATGTAAATATTTACTAATAGG
AATTGGATGATATCAATCTCTCTTTATTGTTGTTACTAATGTGTACTGCAGGGCAAAG
Protein sequenceShow/hide protein sequence
MTYCLVLGSGVDDLCQDDGSLWGGSDEGLEEISDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLACLPDDLKEKLMGN
EENSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSRTIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQQILP