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MC09g1352 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g1352
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNase H domain-containing protein
Genome locationMC09:19600185..19600394
RNA-Seq ExpressionMC09g1352
SyntenyMC09g1352
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5447347.1 hypothetical protein F2P56_032905 [Juglans regia]1.48e-0742.42Show/hide
Query:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN
        + GIGII RN  G V+ T      +Y DP +AE +G  E  RL  HLG  +I++E D L  +++IN
Subjt:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN

XP_010665605.1 PREDICTED: uncharacterized protein LOC104882889 [Beta vulgaris subsp. vulgaris]3.46e-1145.31Show/hide
Query:  GIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN
        GIG+I RNSDGDVL + S+    Y+ P IAE   I   +RL  H GFK+++ ESDC + +  ++
Subjt:  GIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN

XP_035541483.1 uncharacterized protein LOC118344571 [Juglans regia]1.25e-0742.42Show/hide
Query:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN
        + GIGII RN  G V+ T      +Y DP +AE +G  E  RL  HLG  +I++E D L  +++IN
Subjt:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN

XP_038717221.1 uncharacterized protein LOC120010502 [Tripterygium wilfordii]1.41e-0744.44Show/hide
Query:  GIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESI
        GIG+I R+S GDVL   S V++   DP +AE +G    ++LA  LGF ++LVE D  + V++I
Subjt:  GIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESI

XP_042962682.1 uncharacterized protein LOC122296954 [Carya illinoinensis]1.92e-0736.36Show/hide
Query:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN
        + GIG++ R+ +GDV+++L        DPL+AEL  +R+ M+L + L   D++ E D L  V+++N
Subjt:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN

TrEMBL top hitse value%identityAlignment
A0A2I4H2K4 uncharacterized protein LOC1090129304.82e-0733.85Show/hide
Query:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESI
        + GIG+I RNS+G ++ +L    +++ DPL+ E +  R      + LGF+ +++E D L+ V++I
Subjt:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESI

A0A446YT68 RNase H domain-containing protein5.98e-0741.27Show/hide
Query:  GIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESI
        GIG++ RN  GD+L+  +KVF    +P +AE L IR  + +    GF  I + SDCL  V  I
Subjt:  GIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESI

A0A5C7GW84 RNase H domain-containing protein6.07e-0742.86Show/hide
Query:  GIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESI
        GI ++ RN  G V+++  K F+  Y P IAE L + E +RLA + GF   ++ESD LM V  I
Subjt:  GIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESI

A0A6J1CNR4 uncharacterized protein LOC1110129501.04e-0744.07Show/hide
Query:  IGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAV
        IGI+ RN  G +L   S+  E Y+DPL+AE L + E +RLA HL  + +  ESD L  +
Subjt:  IGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAV

A0A6P9EAW2 uncharacterized protein LOC1183445716.07e-0842.42Show/hide
Query:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN
        + GIGII RN  G V+ T      +Y DP +AE +G  E  RL  HLG  +I++E D L  +++IN
Subjt:  QFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAATGTTGATGCAGTTTGGCATTGGAATTATTGGGCGAAATAGTGATGGAGATGTCTTGATAACACTATCGAAGGTCTTTGAGGTGTACTACGATCCGTTAATT
GCAGAACTACTGGGCATCCGGGAGTGCATGCGGTTGGCGAGTCATCTAGGCTTCAAGGATATCTTGGTGGAGTCCGATTGCCTCATGGCCGTCGAATCCATCAAC
mRNA sequenceShow/hide mRNA sequence
TCAATGTTGATGCAGTTTGGCATTGGAATTATTGGGCGAAATAGTGATGGAGATGTCTTGATAACACTATCGAAGGTCTTTGAGGTGTACTACGATCCGTTAATT
GCAGAACTACTGGGCATCCGGGAGTGCATGCGGTTGGCGAGTCATCTAGGCTTCAAGGATATCTTGGTGGAGTCCGATTGCCTCATGGCCGTCGAATCCATCAAC
Protein sequenceShow/hide protein sequence
SMLMQFGIGIIGRNSDGDVLITLSKVFEVYYDPLIAELLGIRECMRLASHLGFKDILVESDCLMAVESIN