CuGenDBv2

Gene ID	MC09g1400
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	cyclin-dependent protein kinase inhibitor SMR1-like
Genome location	MC09:20067325..20068439
RNA-Seq Expression	MC09g1400
Synteny	MC09g1400
Gene Ontology terms	GO:0032875 - regulation of DNA endoreduplication (biological process) GO:0045839 - negative regulation of mitotic nuclear division (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR040389 - Cyclin-dependent protein kinase inhibitor SMR

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022139169.1 cyclin-dependent protein kinase inhibitor SMR1-like [Momordica charantia]

1.73e-94

100

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVVDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS
        MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVVDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVVDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS

Query:  REEIEPYLASSFEHEDRVKSAKRSFCSIEMAKANSGCYVKFR
        REEIEPYLASSFEHEDRVKSAKRSFCSIEMAKANSGCYVKFR
Subjt:  REEIEPYLASSFEHEDRVKSAKRSFCSIEMAKANSGCYVKFR

XP_022957068.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]

8.55e-56

78.29

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSS-DDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SMA D GGV+ QKER  + D GAE+ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSS-DDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRVK-SAKRSFC
        VSREEIEPY  SSF+HE+RVK SAK SFC
Subjt:  VSREEIEPYLASSFEHEDRVK-SAKRSFC

XP_022992922.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]

4.94e-55

76.74

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSSDDGAEDQ-CCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SMA D GGV+ QKER  + DG +++ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSSDDGAEDQ-CCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRVK-SAKRSFC
        VSREEIEPY  SSF+HE+RVK SAK SFC
Subjt:  VSREEIEPYLASSFEHEDRVK-SAKRSFC

XP_023531359.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]

4.24e-56

78.29

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSS-DDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SMA D GGV+ QKER+   D GAE+ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSS-DDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRVK-SAKRSFC
        VSREEIEPY  SSF+HE+RVK SAK SFC
Subjt:  VSREEIEPYLASSFEHEDRVK-SAKRSFC

XP_038893025.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]

1.10e-55

78.91

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIV
        MSTDLDLRRTLL IVRRP  KLQI  P PSTSMA D GGV+ QK+R +  D  E+ CCRTPTS ENKIPA++QCPPAPRKRKRPP+CRRRLMELEFVEIV
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIV

Query:  SREEIEPYLASSFEHEDRV-KSAKRSFC
        +REEIEPYL SSF+HEDRV KSAKRSFC
Subjt:  SREEIEPYLASSFEHEDRV-KSAKRSFC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BFF9 cyclin-dependent protein kinase inhibitor SMR1-like

1.24e-53

73.48

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA---DGGGVVDQKER--SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEF
        MST+LDLRRTLL IVRRP  KLQI  P PST++    D GGV+ QK+R     D GAE+ CCRTPTS ENKIPA++QCPPAPRKRKRPP+CRRRLMELEF
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA---DGGGVVDQKER--SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEF

Query:  VEIVSREEIEPYLASSFEHEDRV-KSAKRSFC
        VEIV R+EIEPYL +SF+HEDRV KSAKRSFC
Subjt:  VEIVSREEIEPYLASSFEHEDRV-KSAKRSFC

A0A5D3CD68 Cyclin-dependent protein kinase inhibitor SMR1-like

1.24e-53

73.48

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA---DGGGVVDQKER--SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEF
        MST+LDLRRTLL IVRRP  KLQI  P PST++    D GGV+ QK+R     D GAE+ CCRTPTS ENKIPA++QCPPAPRKRKRPP+CRRRLMELEF
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA---DGGGVVDQKER--SSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEF

Query:  VEIVSREEIEPYLASSFEHEDRV-KSAKRSFC
        VEIV R+EIEPYL +SF+HEDRV KSAKRSFC
Subjt:  VEIVSREEIEPYLASSFEHEDRV-KSAKRSFC

A0A6J1CC62 cyclin-dependent protein kinase inhibitor SMR1-like

8.38e-95

100

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVVDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS
        MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVVDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVVDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVS

Query:  REEIEPYLASSFEHEDRVKSAKRSFCSIEMAKANSGCYVKFR
        REEIEPYLASSFEHEDRVKSAKRSFCSIEMAKANSGCYVKFR
Subjt:  REEIEPYLASSFEHEDRVKSAKRSFCSIEMAKANSGCYVKFR

A0A6J1GZ63 cyclin-dependent protein kinase inhibitor SMR1-like

4.14e-56

78.29

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSS-DDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SMA D GGV+ QKER  + D GAE+ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSS-DDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRVK-SAKRSFC
        VSREEIEPY  SSF+HE+RVK SAK SFC
Subjt:  VSREEIEPYLASSFEHEDRVK-SAKRSFC

A0A6J1JRA3 cyclin-dependent protein kinase inhibitor SMR1-like

2.39e-55

76.74

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Query:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSSDDGAEDQ-CCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI
        MSTDLDLRRTLL +VRRPA KLQI  PRP +SMA D GGV+ QKER  + DG +++ CCRTPTS ENKIP +LQCPPAPRKRKRPPTCRRRL+ELEFVEI
Subjt:  MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMA-DGGGVVDQKERSSSDDGAEDQ-CCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEI

Query:  VSREEIEPYLASSFEHEDRVK-SAKRSFC
        VSREEIEPY  SSF+HE+RVK SAK SFC
Subjt:  VSREEIEPYLASSFEHEDRVK-SAKRSFC

SwissProt top hits

e value

%identity

Alignment

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR6

9.4e-05

53.85

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Query:  EDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLM
        E++C  TPT+ E KIP LL+CPPAPRKR+    CR  ++
Subjt:  EDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLM

Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR1

1.7e-06

31.58

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Query:  ERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPP-------------TCRRRLMELEFVEIVSREEIEPYLASSFEHEDRVKSAKRSF
        ++   DD  +D  C TPTS E+KIPA++  PP P ++ RPP             +C+R+L+      I++REEI+ + +S +         +RS+
Subjt:  ERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPP-------------TCRRRLMELEFVEIVSREEIEPYLASSFEHEDRVKSAKRSF

Arabidopsis top hits

e value

%identity

Alignment

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS

1.2e-07

31.58

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Query:  ERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPP-------------TCRRRLMELEFVEIVSREEIEPYLASSFEHEDRVKSAKRSF
        ++   DD  +D  C TPTS E+KIPA++  PP P ++ RPP             +C+R+L+      I++REEI+ + +S +         +RS+
Subjt:  ERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPP-------------TCRRRLMELEFVEIVSREEIEPYLASSFEHEDRVKSAKRSF

AT5G40460.1 unknown protein

6.7e-06

53.85

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Query:  EDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLM
        E++C  TPT+ E KIP LL+CPPAPRKR+    CR  ++
Subjt:  EDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLM

Sequences

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CDS sequence

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ATGTCCACGGACCTTGATCTCCGGCGGACTCTGTTAGGAATTGTGCGCCGTCCGGCGAGCAAGCTTCAAATTAGTAATCCGCGGCCGTCGACGTCGATGGCGGACGGCGG
CGGTGTAGTTGATCAGAAAGAGAGAAGCAGCAGCGATGACGGTGCCGAAGATCAATGCTGCCGCACGCCGACCTCCGTGGAGAACAAGATTCCGGCGCTGCTTCAATGTC
CGCCGGCGCCGCGGAAGCGGAAGAGACCTCCGACTTGTAGAAGAAGACTAATGGAGCTTGAATTCGTCGAGATCGTGAGTAGAGAAGAGATCGAACCGTATTTAGCCTCG
AGTTTCGAGCACGAAGACAGAGTTAAATCGGCGAAGAGAAGTTTCTGTTCGATTGAGATGGCGAAGGCGAATTCCGGTTGTTACGTAAAATTTCGATAA

mRNA sequence

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TTTCAACCAAATTTCTCTCTCTCTCTCTCTCTCTCTCGTTTTCTTTGGCAGCTTCTTCTTCTCGTCTGTAACTATATTTAATCGTATAGCTCTCGGACATGTCCACGGAC
CTTGATCTCCGGCGGACTCTGTTAGGAATTGTGCGCCGTCCGGCGAGCAAGCTTCAAATTAGTAATCCGCGGCCGTCGACGTCGATGGCGGACGGCGGCGGTGTAGTTGA
TCAGAAAGAGAGAAGCAGCAGCGATGACGGTGCCGAAGATCAATGCTGCCGCACGCCGACCTCCGTGGAGAACAAGATTCCGGCGCTGCTTCAATGTCCGCCGGCGCCGC
GGAAGCGGAAGAGACCTCCGACTTGTAGAAGAAGACTAATGGAGCTTGAATTCGTCGAGATCGTGAGTAGAGAAGAGATCGAACCGTATTTAGCCTCGAGTTTCGAGCAC
GAAGACAGAGTTAAATCGGCGAAGAGAAGTTTCTGTTCGATTGAGATGGCGAAGGCGAATTCCGGTTGTTACGTAAAATTTCGATAAGATATTGGCTGATCTGTTTGGTT
GTTTTGACATTTTTCGTGTTGAGTGATTGACACGACTTCGGGATCGATAAACTTCCATTTTTTATTTTTGTAATTTTTTTGTTCTCACGATGAGAGAGAAAGAGAAAGAG
AGAGAGTGTACTGAATCTGATGGACTAAGAATGAAGAAACGAAGCATTTTTAGAGTATTTAATTAATTAAAAATTGCGAAA

Protein sequence

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MSTDLDLRRTLLGIVRRPASKLQISNPRPSTSMADGGGVVDQKERSSSDDGAEDQCCRTPTSVENKIPALLQCPPAPRKRKRPPTCRRRLMELEFVEIVSREEIEPYLAS
SFEHEDRVKSAKRSFCSIEMAKANSGCYVKFR

MC09g1400 (gene) of Bitter gourd (Dali-11) v1 genome