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MC09g1423 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g1423
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSingle-stranded nucleic acid binding R3H protein
Genome locationMC09:20317056..20317190
RNA-Seq ExpressionMC09g1423
SyntenyMC09g1423
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9846681.1 hypothetical protein H0E87_021349 [Populus deltoides]7.80e-0452.27Show/hide
Query:  CCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
        CCLVL M+  +        QQ+ EFQ LPTSYL+LAAH    HY
Subjt:  CCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
XP_002517274.1 cAMP-regulated phosphoprotein 21 [Ricinus communis]7.79e-0448.89Show/hide
Query:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
        H   +L M++ +     I  QQ+FEFQH PTSYL+LAAH    HY
Subjt:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
TrEMBL top hitse value%identityAlignment
B9RU55 R3h domain containing protein, putative3.77e-0448.89Show/hide
Query:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
        H   +L M++ +     I  QQ+FEFQH PTSYL+LAAH    HY
Subjt:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40960.1 Single-stranded nucleic acid binding R3H protein4.4e-0444.44Show/hide
Query:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
        H   +L M+  +        QQ+FEFQH PTSYL+ AAH    HY
Subjt:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
AT3G56680.1 Single-stranded nucleic acid binding R3H protein5.2e-0548.89Show/hide
Query:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
        H   +L M+  +  L     QQ+FEFQH PTSYL+LAAH    HY
Subjt:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
AT5G05100.1 Single-stranded nucleic acid binding R3H protein5.7e-0444.44Show/hide
Query:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY
        H   +L M+  +   F    QQ++EFQ LPTSYL+L AH    HY
Subjt:  HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATTGTTGTTTAGTTCTTTGGATGGACAACATATTGACAAATTTATTCGTGATCCAAGCCCAACAGAAATTTGAGTTTCAGCATCTCCCTACCTCATATTTACAGTTAGC
AGCCCATCACGCAGTACCGCATTAC
mRNA sequenceShow/hide mRNA sequence
CATTGTTGTTTAGTTCTTTGGATGGACAACATATTGACAAATTTATTCGTGATCCAAGCCCAACAGAAATTTGAGTTTCAGCATCTCCCTACCTCATATTTACAGTTAGC
AGCCCATCACGCAGTACCGCATTAC
Protein sequenceShow/hide protein sequence
HCCLVLWMDNILTNLFVIQAQQKFEFQHLPTSYLQLAAHHAVPHY