; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g1562 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g1562
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptioninflorescence deficient in abscission (IDA)-like 2
Genome locationMC09:21344148..21344414
RNA-Seq ExpressionMC09g1562
SyntenyMC09g1562
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]5.58e-2761.7Show/hide
Query:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT-GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN
        SS + S  +SS F      I IF I LLLLLSGF SATRPG T++  D ++ +YKT  FRY GQTF FLPKGVP+PPSGPSDRHNS +DS+P N
Subjt:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT-GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN

KAG6601330.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]1.07e-3064.44Show/hide
Query:  SSQNLSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMS---DNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIP
        SS + S  +SS  +  AIF + LLLL+SGFCSATRPGKT+      D ++F+YKTGFRYVGQTFS+LP+GVP+PPSGPSDRHNS +DS+P
Subjt:  SSQNLSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMS---DNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIP

KAG7032113.1 Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma]1.08e-2966.28Show/hide
Query:  LSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMS---DNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIP
        LS  +SS  +  AIF + LLLL+SGFCSATRPGKT+      D  +F+YKTGFRYVGQTFS+LP+GVP+PPSGPSDRHNS +DS+P
Subjt:  LSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMS---DNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIP

KGN52035.1 hypothetical protein Csa_008746 [Cucumis sativus]1.00e-2765.88Show/hide
Query:  ASSRFTPIAIFSIFLLLLL-SGFCSATRPGKTIDMSDNN---SFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN
        +SS  T I IF + LLLLL SG  SATRPGKT++ ++ N   S  YKT FRY GQTFSFLPKGVP+PPSGPSDRHNS +DS+P N
Subjt:  ASSRFTPIAIFSIFLLLLL-SGFCSATRPGKTIDMSDNN---SFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN

TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]6.26e-2761.7Show/hide
Query:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT-GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN
        SS + S  +SS F      I IF I LLLLLSGF SATRPG T++  D ++ +YKT  FRY GQTF FLPKGVP+PPSGPSDRHNS +DS+P N
Subjt:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT-GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN

TrEMBL top hitse value%identityAlignment
A0A0A0KR07 Uncharacterized protein4.85e-2865.88Show/hide
Query:  ASSRFTPIAIFSIFLLLLL-SGFCSATRPGKTIDMSDNN---SFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN
        +SS  T I IF + LLLLL SG  SATRPGKT++ ++ N   S  YKT FRY GQTFSFLPKGVP+PPSGPSDRHNS +DS+P N
Subjt:  ASSRFTPIAIFSIFLLLLL-SGFCSATRPGKTIDMSDNN---SFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN

A0A5A7SV51 Putative Membrane lipoprotein2.70e-2761.7Show/hide
Query:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT-GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN
        SS + S  +SS F      I IF I LLLLLSGF SATRPG T++  D ++ +YKT  FRY GQTF FLPKGVP+PPSGPSDRHNS +DS+P N
Subjt:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT-GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN

A0A5D2EBI1 Uncharacterized protein2.11e-2057.53Show/hide
Query:  IFSIFLLLLLSGFCSATRPGKTIDMSDNNSFD-----YKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDS
        I+ +FL+ LL+G   ATRPGKTI + D  S       Y+TGFRY GQ F+F PKG+P+PPSGPS RHNS +DS
Subjt:  IFSIFLLLLLSGFCSATRPGKTIDMSDNNSFD-----YKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDS

A0A5D3CCP4 Putative Membrane lipoprotein3.03e-2761.7Show/hide
Query:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT-GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN
        SS + S  +SS F      I IF I LLLLLSGF SATRPG T++  D ++ +YKT  FRY GQTF FLPKGVP+PPSGPSDRHNS +DS+P N
Subjt:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT-GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN

A0A7J9A2K5 Uncharacterized protein2.05e-2057.53Show/hide
Query:  IFSIFLLLLLSGFCSATRPGKTIDMSDNNSFD-----YKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDS
        I+ +FL+ LL+G   ATRPGKTI + D  S       Y+TGFRY GQ F+F PKG+P+PPSGPS RHNS +DS
Subjt:  IFSIFLLLLLSGFCSATRPGKTIDMSDNNSFD-----YKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDS

SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA2.8e-0737.8Show/hide
Query:  MASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDN-NSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPH
        MA  R   + +  +  L   S   +A R G T++M  N     +K         F +LPKGVP+PPS PS RHNS ++S+PH
Subjt:  MASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDN-NSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPH

Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein2.0e-0837.8Show/hide
Query:  MASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDN-NSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPH
        MA  R   + +  +  L   S   +A R G T++M  N     +K         F +LPKGVP+PPS PS RHNS ++S+PH
Subjt:  MASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDN-NSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPH

AT3G25655.1 inflorescence deficient in abscission (IDA)-like 11.8e-0432.91Show/hide
Query:  IAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT------GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPH
        + ++ +FLL+   G  +AT     I +S+      ++      GF + G+ F    K V VPPSGPS RHNS ++++ H
Subjt:  IAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT------GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPH

AT5G64667.1 inflorescence deficient in abscission (IDA)-like 23.9e-0433.73Show/hide
Query:  SSQNLSPMASSRFTPIAIFS---IFLLLLLSGFCSATRPGKTIDMSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHN
        SS+N     +S F  ++ F+   + LL+LL GFC+  R    +  S  +            Q   FLP+  PVP SGPS +HN
Subjt:  SSQNLSPMASSRFTPIAIFS---IFLLLLLSGFCSATRPGKTIDMSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCTCACAAAATCTCTCCCCCATGGCTTCTTCTCGATTCACCCCAATCGCCATTTTTTCCATTTTTCTCCTCCTCCTTCTTTCTGGATTTTGCTCTGCGACTCGCCCGGG
GAAGACGATCGACATGTCGGATAATAATTCTTTTGATTACAAGACCGGCTTCCGATATGTCGGACAGACCTTCAGCTTCCTCCCCAAAGGCGTCCCCGTTCCTCCTTCAG
GCCCCTCCGACAGGCACAATTCCAAAATCGACTCCATTCCTCACAAT
mRNA sequenceShow/hide mRNA sequence
AGCTCACAAAATCTCTCCCCCATGGCTTCTTCTCGATTCACCCCAATCGCCATTTTTTCCATTTTTCTCCTCCTCCTTCTTTCTGGATTTTGCTCTGCGACTCGCCCGGG
GAAGACGATCGACATGTCGGATAATAATTCTTTTGATTACAAGACCGGCTTCCGATATGTCGGACAGACCTTCAGCTTCCTCCCCAAAGGCGTCCCCGTTCCTCCTTCAG
GCCCCTCCGACAGGCACAATTCCAAAATCGACTCCATTCCTCACAAT
Protein sequenceShow/hide protein sequence
SSQNLSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKIDSIPHN