; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC09g1687 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC09g1687
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiontranscription factor PRE6-like
Genome locationMC09:22234427..22235099
RNA-Seq ExpressionMC09g1687
SyntenyMC09g1687
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0040008 - regulation of growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044293 - Transcription factor PRE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135185.1 transcription factor PRE6 [Cucumis sativus]3.50e-4791.58Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MS RSSRSRRS V SRNISD+QIADLISKLQQLIPEIRN RSSSRV +SKVLQETCNYIRSLQREVDDLS+RLSELLASTDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

XP_022151230.1 transcription factor PRE6-like [Momordica charantia]3.34e-5297.89Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRV +SKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

XP_022945906.1 transcription factor PRE6-like [Cucurbita moschata]3.50e-4791.58Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MSSRSSRSRRS VPS NISD+QIADLISKLQQLIPEIRNARSSSRV +SKVLQETCNYIRSLQREV DLS+RLSELL STDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

XP_022968308.1 transcription factor PRE6-like [Cucurbita maxima]2.46e-4791.58Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MSSRSSRSRRS VPS NISD+QIADLISKLQQLIPEIRNARSSSRV +SKVLQETCNYIRSLQREV DLS+RLSELL STDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

XP_038893351.1 transcription factor PRE6-like [Benincasa hispida]3.64e-4993.68Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MS RSSRSRRS VPSRNISDDQIADLISKLQQLIPEIRN RSSSRV +SKVLQETCNYIRSLQREVDDLS+RLSELLASTDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

TrEMBL top hitse value%identityAlignment
A0A0A0KQJ7 Transcription regulator1.70e-4791.58Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MS RSSRSRRS V SRNISD+QIADLISKLQQLIPEIRN RSSSRV +SKVLQETCNYIRSLQREVDDLS+RLSELLASTDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

A0A1S3BFH5 transcription factor PRE6-like4.86e-4790.53Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MS RSSRSRRS V SRNISD+QIADLISKLQQLIPEIRN RSSSRV +SKVLQETCNYIRSLQREVDDLS+RLS+LLASTDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

A0A6J1DAM4 transcription factor PRE6-like1.62e-5297.89Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRV +SKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

A0A6J1G268 transcription factor PRE6-like1.70e-4791.58Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MSSRSSRSRRS VPS NISD+QIADLISKLQQLIPEIRNARSSSRV +SKVLQETCNYIRSLQREV DLS+RLSELL STDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

A0A6J1HXN1 transcription factor PRE6-like1.19e-4791.58Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MSSRSSRSRRS VPS NISD+QIADLISKLQQLIPEIRNARSSSRV +SKVLQETCNYIRSLQREV DLS+RLSELL STDPESAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

SwissProt top hitse value%identityAlignment
B8APB5 Transcription factor ILI61.6e-2472.63Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MSSR SRSR+S   S  I+D+QI+DL+SKLQ L+PE R  RS+ RV SS+VLQETCNYIRSL +EVDDLSERLSELLA++D  SAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

Q0DUR2 Transcription factor ILI61.6e-2472.63Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MSSR SRSR+S   S  I+D+QI+DL+SKLQ L+PE R  RS+ RV SS+VLQETCNYIRSL +EVDDLSERLSELLA++D  SAQAAIIRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

Q8GW32 Transcription factor PRE61.2e-2474.19Show/hide
Query:  SSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL
        S RSSRSR+S   S  ISDDQI+DL+SKLQ LIPE+R  R S +V +SKVLQETCNYIR+L REVDDLS+RLSELLASTD  SA+AAIIRSLL
Subjt:  SSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL

Q9CA64 Transcription factor PRE36.7e-2368.09Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL
        MS R SRSR+S   SR IS+DQI DLI KLQQL+PE+R++R S +V +++VLQ+TCNYIR+L REVDDLSERLSELLA++D  +AQAA+IRSLL
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL

Q9LXG5 Transcription factor PRE22.5e-2265.56Show/hide
Query:  SSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL
        SSR  R    S  ISDDQI DLISKL+Q IPEIR  R S+ V +SKVLQETCNYIR+L +E DDLS+RL++LL S DP S QAA+IRSL+
Subjt:  SSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.6e-2674.19Show/hide
Query:  SSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL
        S RSSRSR+S   S  ISDDQI+DL+SKLQ LIPE+R  R S +V +SKVLQETCNYIR+L REVDDLS+RLSELLASTD  SA+AAIIRSLL
Subjt:  SSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 14.7e-2468.09Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL
        MS R SRSR+S   SR IS+DQI DLI KLQQL+PE+R++R S +V +++VLQ+TCNYIR+L REVDDLSERLSELLA++D  +AQAA+IRSLL
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein3.4e-2263.16Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MS+R  RSR++   SR ISDDQ+ DL+SKL+Q +PEI   R S +V +SKVLQETCNYIR L REVD+LS+RLS+LL S D +S +AA+IRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM

AT5G15160.1 BANQUO 21.8e-2365.56Show/hide
Query:  SSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL
        SSR  R    S  ISDDQI DLISKL+Q IPEIR  R S+ V +SKVLQETCNYIR+L +E DDLS+RL++LL S DP S QAA+IRSL+
Subjt:  SSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLL

AT5G39860.1 basic helix-loop-helix (bHLH) DNA-binding family protein1.7e-2160Show/hide
Query:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM
        MS+R SR   S   +  ISD+Q+ DL+SKL+Q++PEI   R S +  +SKVLQETCNYIR+L REVD+LSERLS+LL S D +S +AA+IRSLLM
Subjt:  MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGCAGAAGCTCGCGTTCCAGACGCTCGCCTGTTCCTTCTAGGAACATTTCTGACGACCAGATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGAT
TCGCAATGCCCGTTCCTCCTCCAGGGTACGCTCTTCAAAAGTATTGCAGGAGACGTGCAACTACATAAGAAGCTTACAAAGAGAGGTGGATGACCTAAGCGAGCGGTTAT
CGGAGCTATTGGCGTCTACGGATCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTTATG
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGCAGAAGCTCGCGTTCCAGACGCTCGCCTGTTCCTTCTAGGAACATTTCTGACGACCAGATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGAT
TCGCAATGCCCGTTCCTCCTCCAGGGTACGCTCTTCAAAAGTATTGCAGGAGACGTGCAACTACATAAGAAGCTTACAAAGAGAGGTGGATGACCTAAGCGAGCGGTTAT
CGGAGCTATTGGCGTCTACGGATCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTTATG
Protein sequenceShow/hide protein sequence
MSSRSSRSRRSPVPSRNISDDQIADLISKLQQLIPEIRNARSSSRVRSSKVLQETCNYIRSLQREVDDLSERLSELLASTDPESAQAAIIRSLLM