; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g0018 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0018
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSarcosine dehydrogenase-2C mitochondrial
Genome locationMC10:135884..136493
RNA-Seq ExpressionMC10g0018
SyntenyMC10g0018
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576620.1 hypothetical protein SDJN03_24194, partial [Cucurbita argyrosperma subsp. sororia]6.28e-5166.38Show/hide
Query:  RMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYV
        RMQ  E   PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S  D+DS++S+V EKGQVACRDYPHARYLC+ FPF TTPHQ+ C MC+CYV
Subjt:  RMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYV

Query:  CDSRAPCDHWSFHCSA
        CD+ APCDHW+ HC A
Subjt:  CDSRAPCDHWSFHCSA

XP_022140919.1 uncharacterized protein LOC111011466 [Momordica charantia]1.29e-105100Show/hide
Query:  KVKGREREMINGRMQVGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS
        KVKGREREMINGRMQVGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS
Subjt:  KVKGREREMINGRMQVGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS

Query:  CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
        CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
Subjt:  CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN

XP_022922610.1 uncharacterized protein LOC111430566 [Cucurbita moschata]2.34e-5166.1Show/hide
Query:  RMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC
        RMQ  E   PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S    D+DS++S+V EKGQVACRDYPHARYLC+KFPF TTPHQ+ C MC+C
Subjt:  RMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC

Query:  YVCDSRAPCDHWSFHCSA
        YVCD+ APCDHW+ HC A
Subjt:  YVCDSRAPCDHWSFHCSA

XP_022984372.1 uncharacterized protein LOC111482692 [Cucurbita maxima]1.09e-5162.02Show/hide
Query:  NGRMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC
        + RMQ  E + PLR ILCVKN+  +DLKRFD  + CY+LDFDPFHS + ++S  D+DS++S+V EKGQVACRDYPHARYLC+K PF TTPHQ+ C MC+C
Subjt:  NGRMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC

Query:  YVCDSRAPCDHWSFHCSASHTNPLWEYSR
        YVCD+ APCDHW+ HC   H + LW+  R
Subjt:  YVCDSRAPCDHWSFHCSASHTNPLWEYSR

XP_023552151.1 uncharacterized protein LOC111809913 [Cucurbita pepo subsp. pepo]3.32e-5162.02Show/hide
Query:  RMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC
        RMQ  E   PLR ILCVKN   +DLKRFD  E+CY+LDF+PFHS + ++S    D+DS++S+V EKGQVACRDYPHARYLC+KFPF TTPHQ+ C MC+C
Subjt:  RMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC

Query:  YVCDSRAPCDHWSFHCSASHTNPLWEYSR
        YVCD+ APCDHW+ HC   H +  W+  R
Subjt:  YVCDSRAPCDHWSFHCSASHTNPLWEYSR

TrEMBL top hitse value%identityAlignment
A0A0B0MSZ4 Sarcosine dehydrogenase-2C mitochondrial1.35e-4655.28Show/hide
Query:  EHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR
        +H SPLRSI C+K +VD+KR +E EDC++LDF+PF+S D     +++   +++LS+V EKGQVACRDYPH+R+LC++FPFDTTPH   C +C+CYVCDS 
Subjt:  EHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR

Query:  APCDHWSFHCSASHTNPLWEYSR
        APC+ W  HC AS     W+  R
Subjt:  APCDHWSFHCSASHTNPLWEYSR

A0A2P5WSG3 Uncharacterized protein1.35e-4655.28Show/hide
Query:  EHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR
        +H SPLRSI C+K +VD+KR +E EDC++LDF+PF+S D     +++   +++LS+V EKGQVACRDYPH+R+LC++FPFDTTPH   C +C+CYVCDS 
Subjt:  EHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR

Query:  APCDHWSFHCSASHTNPLWEYSR
        APC+ W  HC AS     W+  R
Subjt:  APCDHWSFHCSASHTNPLWEYSR

A0A6J1CH43 uncharacterized protein LOC1110114666.26e-106100Show/hide
Query:  KVKGREREMINGRMQVGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS
        KVKGREREMINGRMQVGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS
Subjt:  KVKGREREMINGRMQVGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQS

Query:  CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
        CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN
Subjt:  CCTMCFCYVCDSRAPCDHWSFHCSASHTNPLWEYSRHYYNN

A0A6J1E9A2 uncharacterized protein LOC1114305661.13e-5166.1Show/hide
Query:  RMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC
        RMQ  E   PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S    D+DS++S+V EKGQVACRDYPHARYLC+KFPF TTPHQ+ C MC+C
Subjt:  RMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS---KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC

Query:  YVCDSRAPCDHWSFHCSA
        YVCD+ APCDHW+ HC A
Subjt:  YVCDSRAPCDHWSFHCSA

A0A6J1J202 uncharacterized protein LOC1114826925.28e-5262.02Show/hide
Query:  NGRMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC
        + RMQ  E + PLR ILCVKN+  +DLKRFD  + CY+LDFDPFHS + ++S  D+DS++S+V EKGQVACRDYPHARYLC+K PF TTPHQ+ C MC+C
Subjt:  NGRMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHSPDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFC

Query:  YVCDSRAPCDHWSFHCSASHTNPLWEYSR
        YVCD+ APCDHW+ HC   H + LW+  R
Subjt:  YVCDSRAPCDHWSFHCSASHTNPLWEYSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20310.1 RPM1 interacting protein 132.7e-2340.74Show/hide
Query:  DEREDCYVLDFDPFHSPD-PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPCDHWSF------HCSASHTNPL
        ++ +DC +LD DP  + +  S+  D D ++ +VG+KG++ACRD+PH R+ C K+ F++T H+  C MC CYVCD RAPC +W        HC A+    +
Subjt:  DEREDCYVLDFDPFHSPD-PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPCDHWSF------HCSASHTNPL

Query:  WEYSRHYY
        W+  R Y+
Subjt:  WEYSRHYY

AT4G27660.1 unknown protein9.2e-3245.03Show/hide
Query:  KVKGREREMINGRMQVGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD-----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDT
        K K + R+ ++   +  E  +PLR I C+K   D+K F+E+EDC++LDFDP  S D      S + + D +++IV EKGQVACRD+PH R+LC+KFPF++
Subjt:  KVKGREREMINGRMQVGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD-----PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDT

Query:  TPHQSCCTMCFCYVCDSRAPCDHW--SF---HCSASHTNPLWEYSRHYYNN
        + H S C  C+CYVCD  APC +W  SF   HC A   N  W+  R  Y +
Subjt:  TPHQSCCTMCFCYVCDSRAPCDHW--SF---HCSASHTNPLWEYSRHYYNN

AT4G28690.1 BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 (TAIR:AT2G20310.1)5.4e-2439.84Show/hide
Query:  VGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAP
        V +   P++  + +   V+ +  D+ +DC +LDFDP        + +TD  L +VG+KG+VACRD+PH R+ C K+PF +T HQ+ C MC CYVCD+RAP
Subjt:  VGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAP

Query:  CDHW-------SFHCSASHTNPLWEYSR
        C +W       + HC A+     W   R
Subjt:  CDHW-------SFHCSASHTNPLWEYSR

AT5G54148.1 unknown protein9.2e-2443.44Show/hide
Query:  EHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPCD
        E  +PL  I C+K   D+KRF+E EDC++LDFDPF S D      TD               DYPH R+ C+ FPF +TP+ S C +C+CYVCD  APC 
Subjt:  EHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPCD

Query:  HWSF---HCSASHTNPLWEYSR
         W+    HC+A + + LW   R
Subjt:  HWSF---HCSASHTNPLWEYSR

AT5G54150.1 unknown protein7.7e-3149.62Show/hide
Query:  EHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD-PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPC
        E  SPLR ILCVK   D+KRF++ EDC++LDF+PF S D   +S   D +L I+ E GQVACRDYPH R+LC+ FPF +T + + C +C+C+VCD  APC
Subjt:  EHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPD-PSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSRAPC

Query:  DHW-SFHCSAS-----HTNPLWEYSRHYYNN
          W S HC+AS       +P  E   +YY++
Subjt:  DHW-SFHCSAS-----HTNPLWEYSRHYYNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGTGAAAGGGCGAGAGAGAGAGATGATAAATGGTAGAATGCAAGTAGGGGAGCATCATTCCCCCCTCCGATCTATTTTGTGCGTAAAAAATGTCGTGGATTTGAAGCG
TTTCGACGAGAGGGAGGATTGTTACGTGTTAGACTTTGACCCCTTCCACTCCCCCGACCCCTCAATTTCCAAGGACACTGACTCTGAACTTTCCATTGTGGGGGAGAAGG
GTCAGGTGGCCTGTAGAGACTACCCACACGCTAGGTATTTGTGTGTCAAATTCCCCTTCGACACAACCCCTCACCAGAGTTGCTGCACGATGTGTTTCTGTTACGTGTGT
GATTCGAGAGCACCATGCGACCACTGGTCGTTCCATTGCAGTGCTTCGCATACCAATCCACTCTGGGAATACTCAAGGCACTACTACAACAAC
mRNA sequenceShow/hide mRNA sequence
AAAGTGAAAGGGCGAGAGAGAGAGATGATAAATGGTAGAATGCAAGTAGGGGAGCATCATTCCCCCCTCCGATCTATTTTGTGCGTAAAAAATGTCGTGGATTTGAAGCG
TTTCGACGAGAGGGAGGATTGTTACGTGTTAGACTTTGACCCCTTCCACTCCCCCGACCCCTCAATTTCCAAGGACACTGACTCTGAACTTTCCATTGTGGGGGAGAAGG
GTCAGGTGGCCTGTAGAGACTACCCACACGCTAGGTATTTGTGTGTCAAATTCCCCTTCGACACAACCCCTCACCAGAGTTGCTGCACGATGTGTTTCTGTTACGTGTGT
GATTCGAGAGCACCATGCGACCACTGGTCGTTCCATTGCAGTGCTTCGCATACCAATCCACTCTGGGAATACTCAAGGCACTACTACAACAAC
Protein sequenceShow/hide protein sequence
KVKGREREMINGRMQVGEHHSPLRSILCVKNVVDLKRFDEREDCYVLDFDPFHSPDPSISKDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVC
DSRAPCDHWSFHCSASHTNPLWEYSRHYYNN