; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g0022 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0022
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionribosome-binding factor PSRP1, chloroplastic
Genome locationMC10:153096..163888
RNA-Seq ExpressionMC10g0022
SyntenyMC10g0022
Gene Ontology termsGO:0045900 - negative regulation of translational elongation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0043022 - ribosome binding (molecular function)
GO:0043024 - ribosomal small subunit binding (molecular function)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR034694 - Ribosome hibernation promoting factor, long/plastid
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014676.1 Ribosome-binding factor PSRP1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.69e-17784.83Show/hide
Query:  MATLTSSMHTNLLSA------------PSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSS
        MA LTSSM TNLLSA             SSSST STFP SFSL TSTNS+ LK H LSSH S FFNSCN CF TI +APR RHA  SF+IRMSWDGPLSS
Subjt:  MATLTSSMHTNLLSA------------PSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSS

Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK
        VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEK
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        DSD GRHMKGFDR K+R+PAPIVVEDEEEE  VS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
Subjt:  DSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

Query:  ENGRAEKLEPVTVEPAREPSLAE
        E+G AEK+E VTVE ARE SLAE
Subjt:  ENGRAEKLEPVTVEPAREPSLAE

XP_022141073.1 ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]2.54e-213100Show/hide
Query:  MATLTSSMHTNLLSAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELT
        MATLTSSMHTNLLSAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELT
Subjt:  MATLTSSMHTNLLSAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELT

Query:  EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDR
        EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDR
Subjt:  EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDR

Query:  LKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTV
        LKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTV
Subjt:  LKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTV

Query:  EPAREPSLAE
        EPAREPSLAE
Subjt:  EPAREPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]3.49e-17886.21Show/hide
Query:  MATLTSSMHTNLLSA--------PSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLI
        MA LTSSM TNLLSA         SSSST STFP SFSL TSTNS+ LK H LSSH S FFNSCN CF TI +APR RHA  SF+IRMSWDGPLSSVKLI
Subjt:  MATLTSSMHTNLLSA--------PSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR
        GRHMKGFDR K+REPAPIVVEDEEEE  VS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G 
Subjt:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR

Query:  AEKLEPVTVEPAREPSLAE
        AEK+E VTVE ARE SLAE
Subjt:  AEKLEPVTVEPAREPSLAE

XP_022984371.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita maxima]2.38e-17589.26Show/hide
Query:  SAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVG
        S+ SSSST STFP SFSL TSTNS+ LKIH LSSH S FFNSCN CF TI IAPR RHA  SF+IRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVG
Subjt:  SAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVG

Query:  KAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVE
        KAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD GRHMKGFDR K+REPAPIVVE
Subjt:  KAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVE

Query:  DEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE
        DEEEE  VS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E VTVE ARE SLAE
Subjt:  DEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE

XP_023551717.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]5.62e-17987.7Show/hide
Query:  MATLTSSMHTNLLSA----PSSSS--TFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQ
        MA LTSSM TNLLSA    PSSSS  T STFP SFSL TSTNS+ LKIH LSSH S FFNSCN CF TI IAPR RHA  SF+IRMSWDGPLSSVKLIVQ
Subjt:  MATLTSSMHTNLLSA----PSSSS--TFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQ

Query:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGR
        GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD GR
Subjt:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGR

Query:  HMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAE
        HMKGFDR K+REPAPIVVEDEEEE  VS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Subjt:  HMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAE

Query:  KLEPVTVEPAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVEPAREPSLAE

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic4.58e-17285.44Show/hide
Query:  MATLTSSMHTNLLSAPS------SSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQG
        MATLTSSM  NLLS  S      SSST S FPA FSL    + SALK+H LSS+ S FFNSC  F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQG
Subjt:  MATLTSSMHTNLLSAPS------SSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQG

Query:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH
        KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVR EEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH
Subjt:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH

Query:  MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEK
        +KGFDR KVREPAPIVVEDEEEE  V  ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK
Subjt:  MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEK

Query:  LEPVTVEPAREPSLAE
        LEPVTVE AREPSLAE
Subjt:  LEPVTVEPAREPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP14.58e-17285.44Show/hide
Query:  MATLTSSMHTNLLSAPS------SSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQG
        MATLTSSM  NLLS  S      SSST S FPA FSL    + SALK+H LSS+ S FFNSC  F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQG
Subjt:  MATLTSSMHTNLLSAPS------SSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQG

Query:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH
        KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVR EEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH
Subjt:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRH

Query:  MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEK
        +KGFDR KVREPAPIVVEDEEEE  V  ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK
Subjt:  MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEK

Query:  LEPVTVEPAREPSLAE
        LEPVTVE AREPSLAE
Subjt:  LEPVTVEPAREPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic1.23e-213100Show/hide
Query:  MATLTSSMHTNLLSAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELT
        MATLTSSMHTNLLSAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELT
Subjt:  MATLTSSMHTNLLSAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELT

Query:  EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDR
        EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDR
Subjt:  EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDR

Query:  LKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTV
        LKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTV
Subjt:  LKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTV

Query:  EPAREPSLAE
        EPAREPSLAE
Subjt:  EPAREPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic1.69e-17886.21Show/hide
Query:  MATLTSSMHTNLLSA--------PSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLI
        MA LTSSM TNLLSA         SSSST STFP SFSL TSTNS+ LK H LSSH S FFNSCN CF TI +APR RHA  SF+IRMSWDGPLSSVKLI
Subjt:  MATLTSSMHTNLLSA--------PSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR
        GRHMKGFDR K+REPAPIVVEDEEEE  VS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G 
Subjt:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR

Query:  AEKLEPVTVEPAREPSLAE
        AEK+E VTVE ARE SLAE
Subjt:  AEKLEPVTVEPAREPSLAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic1.15e-17589.26Show/hide
Query:  SAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVG
        S+ SSSST STFP SFSL TSTNS+ LKIH LSSH S FFNSCN CF TI IAPR RHA  SF+IRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVG
Subjt:  SAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCN-CFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVG

Query:  KAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVE
        KAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSI+QRKLRKIKEKDSD GRHMKGFDR K+REPAPIVVE
Subjt:  KAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVE

Query:  DEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE
        DEEEE  VS ED GE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E VTVE ARE SLAE
Subjt:  DEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic1.5e-9157.86Show/hide
Query:  TMATLTSSMHTNLLSAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLEL
        T+ T   +M+ NL ++ S+S   S+ P + S L ST                F NSC+    + +            + MSWDGPLSSVKLI+QG+NLE+
Subjt:  TMATLTSSMHTNLLSAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLEL

Query:  TEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD
        ++ V+ HVE+KVGK+V KHSHLVREVDVRLS RGG+  KGP++RRCEVTLFTK+HGV+R EEDAE++Y+SIDLVSSIIQRKLRKIK+K SD GRHMKGF+
Subjt:  TEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFD

Query:  RLKVREPAPIVVEDEEEEEE-------VSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRA
        R KVR+P P+ +  EE  EE       VS+ED  + I+E+VRTKYFDMPPLT+ EA+EQL+N+DHDFY FRNEETG+INILYKRK+GGYGLIIPK+ G+ 
Subjt:  RLKVREPAPIVVEDEEEEEE-------VSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRA

Query:  EKLEPVTVEPAREPSLAE
        EKLE + V+  ++PS AE
Subjt:  EKLEPVTVEPAREPSLAE

P47908 Ribosome hibernation promotion factor3.0e-3139.5Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK
        +KL++QG N+ +TE++  +VE K+ KA +       +VDV LSV      +     + EVT++     V+R +E +E +YASIDLVS  I R+LRK KEK
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        +  +  H        V+E    V+ ++   + +  + + E+  E+VR KYF MPP+T++EA+EQL+ +DHDFY F N++T  IN++Y R  GGYG+I P+
Subjt:  DSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

P74518 Ribosome hibernation promotion factor1.7e-3443.14Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKI
        +KL++QG N+ +TEA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    + EVT++     V+R +E +E +YASIDLV+  I R+LRK 
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKI

Query:  KEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
        KE+  D     K    +K  E    +VED+  EE +  + + E+  E++R KYF MPP+ +E+A+EQL+ +DHDFY FRN++T EIN++Y R  GGYG+I
Subjt:  KEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Query:  IPKE
         P +
Subjt:  IPKE

Q49VV1 Ribosome hibernation promotion factor2.6e-1932.5Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK
        ++  + G+NL +T+A++ ++EEK+GK ++++ + V      + V+  +        + EVT+  KK   +R EE  + +YA IDL+++ ++R++RK K +
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRH---MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
         + R R+    + F  L   + A  +  DE E +        E+  EI+R K F + P+  EEA+ Q+  + HDF+ F + ET   +I+YKRKDG YGLI
Subjt:  DSDRGRH---MKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Q9RVE7 Ribosome hibernation promotion factor5.3e-2032.99Show/hide
Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR
        + G+N+E+TE ++++VEEK+ + + +++  + +  V L+VR  +     R  R EV L     G++R EE    +YA+ID  S +++R+LRK K      
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHMKGFDRLKVRE-PAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
         R+MK     +    P P   E   +    +++D  E   EIVR K F++ P++ E+A+ Q++ + HDFY F++ + G+  ++Y+R+DG YGLI
Subjt:  GRHMKGFDRLKVRE-PAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative2.6e-9973.79Show/hide
Query:  RNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETV
        R+ +  +S  ++MSWDGPL+SVKLI+QGKNLEL+E +K+HVEEKVGK+VQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETV
Subjt:  RNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETV

Query:  YASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPA-PIVVEDEEEEEEVSL---EDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF
        YA IDLVS+IIQRKLRKIKEKDSD GRHMKGF+RLKVREP    VVED E+  + S+   E+  ++I EIVRTK F+MPPLTV EA+EQL+ + HDFYGF
Subjt:  YASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPA-PIVVEDEEEEEEVSL---EDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF

Query:  RNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE
        +NEETGEINI+YKRK+GGYGLIIPK++G+AEK+EP+  E   E S AE
Subjt:  RNEETGEINILYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGTTGGAGCATAATTAGTTTAATAAGGATATGGGAAGGAAAAAGAAATGGTGGAGTGGCGTCCACAAAAACTCTATTTAATCTTTTATCCATTTGTTTTCAAAG
CCAAAATCCCATCACTTTCTTTCTTCGATTTCCAAGTTTTCAAACAATGGCTACTCTCACCTCTTCCATGCACACTAATCTCCTTTCCGCTCCTTCTTCTTCTTCTACCT
TTTCCACTTTCCCCGCTTCATTCTCTCTTCTCACTTCTACCAACTCCTCTGCCCTCAAAATCCACCCTCTTTCTTCCCATACTTCACCTTTCTTCAACTCCTGCAACTGC
TTCACAACCATTCAGATTGCTCCCCGGAACCGCCATGCCGCAAACTCTTTCACTATTCGCATGTCCTGGGATGGCCCCCTCTCCTCTGTTAAATTAATTGTCCAAGGCAA
GAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCAGTTCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTATCAGTTC
GAGGTGGAGAGTTTGGGAAGGGTCCGAGGATTAGAAGATGCGAGGTTACTTTATTCACGAAGAAGCATGGAGTTGTGCGTGGAGAGGAAGATGCTGAGACTGTCTATGCG
AGCATTGATTTGGTATCTTCTATCATACAAAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCGTGGCCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGA
ACCTGCACCAATAGTTGTTGAAGATGAGGAAGAGGAAGAGGAAGTTTCTCTGGAAGATAGTGGAGAAGTTATTGATGAGATCGTTCGGACAAAATACTTTGATATGCCTC
CTTTGACTGTTGAAGAAGCAATCGAACAACTCAAAAATATTGACCATGATTTCTATGGTTTCCGGAACGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGAT
GGAGGATATGGACTTATCATCCCAAAAGAAAATGGCAGAGCTGAGAAATTAGAGCCTGTGACAGTTGAGCCAGCCAGAGAACCTTCCTTGGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
GGGAGTTGTTTTAAAAGAGTTATCTTACTAATTATTAAGATTTTCTAAGCTGCCTGGAATTGGATTAAACTTTTAGAAGCTAATTAAAGTTGATTACCTTTAGATTTTGT
GTCTTGTAAAAAAAACAATAAGAGGCCGAACATAGGAAAGTAAAAGATATAATAACGTTGCAATGCAAAGTTGGAGCATAATTAGTTTAATAAGGATATGGGAAGGAAAA
AGAAATGGTGGAGTGGCGTCCACAAAAACTCTATTTAATCTTTTATCCATTTGTTTTCAAAGCCAAAATCCCATCACTTTCTTTCTTCGATTTCCAAGTTTTCAAACAAT
GGCTACTCTCACCTCTTCCATGCACACTAATCTCCTTTCCGCTCCTTCTTCTTCTTCTACCTTTTCCACTTTCCCCGCTTCATTCTCTCTTCTCACTTCTACCAACTCCT
CTGCCCTCAAAATCCACCCTCTTTCTTCCCATACTTCACCTTTCTTCAACTCCTGCAACTGCTTCACAACCATTCAGATTGCTCCCCGGAACCGCCATGCCGCAAACTCT
TTCACTATTCGCATGTCCTGGGATGGCCCCCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAGAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGT
TGGCAAGGCAGTTCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTATCAGTTCGAGGTGGAGAGTTTGGGAAGGGTCCGAGGATTAGAAGATGCGAGGTTA
CTTTATTCACGAAGAAGCATGGAGTTGTGCGTGGAGAGGAAGATGCTGAGACTGTCTATGCGAGCATTGATTTGGTATCTTCTATCATACAAAGGAAGTTGAGAAAGATT
AAAGAGAAAGATTCAGACCGTGGCCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTTGTTGAAGATGAGGAAGAGGAAGAGGAAGTTTC
TCTGGAAGATAGTGGAGAAGTTATTGATGAGATCGTTCGGACAAAATACTTTGATATGCCTCCTTTGACTGTTGAAGAAGCAATCGAACAACTCAAAAATATTGACCATG
ATTTCTATGGTTTCCGGAACGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATCATCCCAAAAGAAAATGGCAGAGCTGAGAAA
TTAGAGCCTGTGACAGTTGAGCCAGCCAGAGAACCTTCCTTGGCGGAATGATTGGAGTTCACAGAGAAAGTTTCATGTTGAAGATATCTTACAACTGCTAGATTCACTTA
AAACTTGGCATAATTTTACTGGCACTGTTGCATCTGAAGGCATAGCTTGCAGAGAGTATATAGATATAGTTTTGAGGTAACATGATGATGAGACAATTTTGGAATAAGAA
ATATGAGTATCAAGTGTTGAGTAAAATGAGATGCAGAATGTTGTAATGAATGAACGATTCAGCATGCAGTGATTACCAACATGCAAATATGCTATAATCTTTTCTAATCG
TGGCCAGTTTTGGTTATATTCTAGTGTTGGTACTTGATACATCTTTGTTCCTTTCATAAAGGACAGCTGCCTCAGTTTTCCACATTTTTACTTAAATTCATATGCGAGAT
GATATTGATCATACAAATCTGCCCATTTGAGTGCAACGTCAAATATCAGTTAAATGATATTGATCATACAAATCTGCCCATTTGAGTGCAATGTCAAATGTCAGTTCTTA
CGGATATTGGGATTCTAACAGAATGAACCCCATCAAGCCATGTCAAGCTTCCAAAACAGTATCCGGTTGTGACTCTATGATTAGAAGAGACAGTGACGGTGAAGGAGATG
ATCTTCCTCTTGTGGTTGAATTTTAGCATACGAGGCTTTACAGCTATGGCTATGCCGGGCCCGGGTGGAGTCTCAATGGCAGCCTTGTATGTGGAGTTGACTGCACCCAC
ATTGGTGACAGTTCTGGTGACAGTCACGGAGTGTTTGAGGCCAGGTATTGTTATGGATGGCACGTTTGTGTCAAGAATAGATGGCCGTCTTTTGGGGCAAGATATGGGCT
TCTTGGTAATCCCTGAAATGGCAGAGTCATTGTAGCCCATGGCACAGAAATACCGAATATAGTCTGCCATTCCCATGTCATATACAAGACCAGGGTCCACTGCTTTATTG
GGGTTCACAATTCCACCTCCAAAATCAAAAGGACCCGCAGACTTGATTGGGCGTCCCTCTGCGAATATTGTTTCACCATATGGATCCGAAGTCCAGGCTGCACGTTATAG
ATATAAATTTATAATGTAAATGCTTGATATCTTAAATACATCATAACTTTGGTGGTAAAATTCTACCTGTTGTAACGATAGCTGACTTAATTGCAGCAGGGGACCAATGC
GAGTGCAAAGATTTGAGAAGGGCAACAATGGCTGATACATGAGGAGTTGCCATGGATGTCCCAGAAATAAAAGCGTAAGAGTTTTTATCCTTTGGATCAGAGGGAGGAAC
TGCAGCTAAAATAGCAACGCCTGGAGCAGCAATATCGGGCTGTACTAATTGCAGACTCATTCAGCAAAGAGTCGTGGTAAGGACGAATTTCCCAGGAAGAAGACTGGAAT
TGAACGGTTACCTTCAGTATTGCTGGAGCAACTGAATTAGGTCCTCGAGACGAAAAGTAGGCCACAGTGGTGGACAATGATTGGCCGATTCGTGTCCTCGAAGGACCGAT
GTTGACTTGAGGATTTCTGTAGGGTTAGTAACAAGTAACAGTGTCATGGCCATAGCCATTGAAGGCAGAGCATGAAATAGAGGGCGGAGGAGGAATATACCTGGTAGAGC
GGATATAGTTAAGTATATGCATTCCAATCTCAAGGCTTACTTGAACGCATGGAAAGTGGTTTATGAATGGTTCAACGTCCTTGGTAGGGTTCTTGGCAACAATGAGCCCC
AACGCACCAACTTTTTTGACAGACCGAGAAGTATGGTGTGTATTGTCATTAAAATCGTCTGATGCGAAACAGAGAACCACATTTCCGGCTGCCCACGTATCATTTAAGGA
TAGAGATTCGCAGGCGCTGTTAACAAAATTTCAAGTTGAAAAAGTGAAGCATCCAGCTGATAGATGTCAAACGACTAAAAATATAATACTTGTACTAACCGTTCATCCTC
CAGATCAGAAACCTCGGGATATACTAAATTGTGGAACCTCCTCAACTTTCCACTGAACATCCCTTGTCCCTACAGCGTTAATGGTCAATACAAATAGCTCTCTTAGAACT
AACTGATTGCTGTTTGCATGATGAGGTTCGATAAGAATTACCACGGTAGTCCAGTTGTTTCCCAATGTAATCGCTACTAAGAATGAACGATCCACAGAACTTGCAGCGAC
TGTCAACAACCATGGTTCTATATTTGCTACAGAGTAAGCAGCTGGACCATAATTTCCTGCTGCACCAACGACAACTATCCCCTTCACGATAGCATGAAATGTTCCAATTG
CAACCCCATTGTGCATGTCGACATCAGAATATGAAGGAAAGGTAGGGCCAAGGGACAGAGAGAGAACATCTACGCCATCGTGTATGGCTTGGTCGATGGCCTTGAGAATG
TCTGCGTCTGAGCATACTCCTCCATTCAGTTGCCAGCAGACTTTATACATAGCGAGCCGAGACTGGGGTGCGCCACCTCTTACTGTTCCAACAGCTAGGCCATGGTAACT
AACATTGGCTACAAAGGAGCCACTGGCAACTGAAGAGACGTGTGTGCCATGTCCTGCGTAATCTCTCGGAGACAAGTAATCTTGGAACCCACTATTATTGTATGGATGTC
CATATGCAGCTTCCAGCCCCTTGATGAAATACCGGGCTCCAATTAGCTTTCTGCTACAGGCCTTACCTGGACTGAACAACTCTCCTGACTCACAGATACCCTTCCACCTA
GAGGGAACGGGCCCTAGACCATTGTCACTGAATACTTCAGATTCTGGCCAGATCCCTGCTCGTGACATTCGAGAGTTAGCTTGGGACCTCAGTCTCAGACAATACAAGGA
CAAAGATTGAGGTAGAGGAAGGACAGAAATCTGAACCTGTATCAAGGAGGCCAATGATGGCCCCGTTTCCCATTCTCGATTTCTGTAGAAGAGAGTTCTGAAGTCGTGGA
GAGAGTTGAAGGTAGTCCCAGCTCCTAGTGGTTTGCATTTTGTGAAGACGATTCGGTATGACTTTAATCACAGTAGGCAACTCTACAACCAAAAAATGAAATGTACTTGT
TAATTATGGCGTGCTTTCATTTAAATTAAGCACTACCAAACCAAACATTCGTAGAAGTCGAGATCTTTATATATCATTCGACTCCCTCGCTCCCCTTTTGTGATTAATCC
GAACTCCAAAGTCATTAATCCACACATACACCCTCATTACTCGTTAACTAGAGATAAACAAATGCTTGGTCGAAGGGAGTTTATGTGTCTTAAAAAATAAAGTTGATGGG
CTCTATCAAGACTCAAGAGGGCAGAGGGCTTGTCATATGGTGAGCAGCAACACTTTTCCAAGTTATCAGCCACTTTAGTTTCAGTTCTCACTTCTCCATAATGTTGAATG
TATGTAACACGATAATAGTTCATGGTTGAAAACTATGCACAAGAACATTTTAGTGCATCAGCAACAGAAAATACCTGAGATCTTTTGTGCTTGAGCCATTGTAAGCTTTG
CTGCAAAACC
Protein sequenceShow/hide protein sequence
MQSWSIISLIRIWEGKRNGGVASTKTLFNLLSICFQSQNPITFFLRFPSFQTMATLTSSMHTNLLSAPSSSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFNSCNC
FTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYA
SIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKD
GGYGLIIPKENGRAEKLEPVTVEPAREPSLAE