; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g0100 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0100
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationMC10:694263..696746
RNA-Seq ExpressionMC10g0100
SyntenyMC10g0100
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013270.1 Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma]2.03e-18783.43Show/hide
Query:  MAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MAHS V ASLSS+ ASNRM TLIYSFPVISK IESVKFS  ASS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVF
        ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYY++ MHDKLFE+F
Subjt:  ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVF

Query:  ADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAETVSKDSSLEDE
        ADMEELGVQP+  IVTM+GNVFQ+LGM DKYEKLKKKYPP KWEYRY++GKRV+IRAK L+E G+SNNGS ELD+K+ SS + LLEE +  S+DSSLED+
Subjt:  ADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAETVSKDSSLEDE

Query:  EMREDPDEILEDESK-LEAPDFEYNFMGYGRL
        EM EDP E LEDES  L+   FE++FMG+G+L
Subjt:  EMREDPDEILEDESK-LEAPDFEYNFMGYGRL

XP_022140817.1 pentatricopeptide repeat-containing protein At4g21190 [Momordica charantia]2.94e-242100Show/hide
Query:  MELWKTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKE
        MELWKTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKE
Subjt:  MELWKTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKE

Query:  EVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYY
        EVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYY
Subjt:  EVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYY

Query:  DQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAE
        DQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAE
Subjt:  DQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAE

Query:  TVSKDSSLEDEEMREDPDEILEDESKLEAPDFEYNFMGYGRL
        TVSKDSSLEDEEMREDPDEILEDESKLEAPDFEYNFMGYGRL
Subjt:  TVSKDSSLEDEEMREDPDEILEDESKLEAPDFEYNFMGYGRL

XP_022945794.1 pentatricopeptide repeat-containing protein At4g21190 [Cucurbita moschata]4.09e-18783.43Show/hide
Query:  MAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MAHS V ASLSS+ ASNRM TLIYSFPVISK IESVKFS  ASS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVF
        ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALA DGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYY++ MHDKLFE+F
Subjt:  ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVF

Query:  ADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAETVSKDSSLEDE
        ADMEELGVQP+  IVT +GNVFQ+LGM DKYEKLKKKYPP KWEYRY++GKRV+IRAK L+E G+SNNGS ELD+K+ SS + LLEE E  S+DSSLED+
Subjt:  ADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAETVSKDSSLEDE

Query:  EMREDPDEILEDESK-LEAPDFEYNFMGYGRL
        EM EDPDE LEDES  L+   FE++FMG+G+L
Subjt:  EMREDPDEILEDESK-LEAPDFEYNFMGYGRL

XP_022968275.1 pentatricopeptide repeat-containing protein At4g21190 [Cucurbita maxima]8.22e-18882.75Show/hide
Query:  KTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSW--SASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEV
        KTFL  SSMAHS V ASLSS+ ASNRM TLIYSFPVISK IESVKFS   SA S+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEV
Subjt:  KTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSW--SASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEV

Query:  YGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQ
        YGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYY++
Subjt:  YGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQ

Query:  GMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAET
         MHDKLFE+FADMEELGVQP+  IVTM+G+VFQ+LGM DK EKLKKKYPP KWEYRY++GKRV+IRAK L+E G+SNNGS ELD+K+ SS + LLEE ET
Subjt:  GMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAET

Query:  VSKDSSLEDEEMREDPDEILEDESKL-EAPDFEYNFMGYGRL
         S+DSSLED+EM ED DE+LEDES L +   FE++FMG+G+L
Subjt:  VSKDSSLEDEEMREDPDEILEDESKL-EAPDFEYNFMGYGRL

XP_038888232.1 pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Benincasa hispida]9.71e-18882.78Show/hide
Query:  MAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MAHS  QASLSSSSAS RM TLIYSFPVISKRIESV FSW ASS+VVCAAKGPRPRYPRVWKT+KRIGT+SKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVF
        ELEFPLITVKKAL+TLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYYD+ MHDKLFEVF
Subjt:  ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVF

Query:  ADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDE-
        ADMEELGVQPN EIVTM+GNVF ELGM DKYEKL KKYPP KWEYRY+KGKRVRIR+KYL E GN NN  S+ D+ + SS KLLEEAE  S+D++LED+ 
Subjt:  ADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDE-

Query:  EMREDPDEILEDESKLEAPDFEYNFMGYGRL
        EM EDP+EI +DE   +  +FE++FMG+G+L
Subjt:  EMREDPDEILEDESKLEAPDFEYNFMGYGRL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q9 Uncharacterized protein1.92e-18480.36Show/hide
Query:  LLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD
        ++ +SM HS  QA+LSS  AS RM TL+Y+FPV SKRIESV FSW  SS+VVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALD
Subjt:  LLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD

Query:  SFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDK
        SFIAWELEFPLITVKKALKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LES+PR+FFHKMISLYYDQ MHDK
Subjt:  SFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDK

Query:  LFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSS
        LFEVFADMEELGVQPN  IVT +GNVFQELGM DKY+KL KKYPP KWEYRY+KGKRV+IRAKYL+E GNSNNG SE  + + SS   ++EAE  S+DSS
Subjt:  LFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSS

Query:  LEDEE-MREDPDEILEDESKLEAPDFEYNFMGYGRL
        LED+E M EDPDEILEDE      +FE++FMG G+L
Subjt:  LEDEE-MREDPDEILEDESKLEAPDFEYNFMGYGRL

A0A1S3AY30 pentatricopeptide repeat-containing protein At4g21190 isoform X23.18e-18379.76Show/hide
Query:  LLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD
        ++ +SM H   QA+L+S SAS RM TL+Y+FPV SKRIESV FSW  SS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD
Subjt:  LLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD

Query:  SFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDK
        SFIAWELEFPLITVKKALKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQYLESMPR+FFHKMISLYYD+ MHDK
Subjt:  SFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDK

Query:  LFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSS
        LFEVFADMEELGVQPN  IVT +GN+FQELGM DKYEKL KKYPP KWEYRY+KGKRV+IR KYL+E GNS NG SE ++ + SS   L+EAE  S+DSS
Subjt:  LFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSS

Query:  LED-EEMREDPDEILEDESKLEAPDFEYNFMGYGRL
        LED EE+ +DPDEILEDE      +FE++FMG G+L
Subjt:  LED-EEMREDPDEILEDESKLEAPDFEYNFMGYGRL

A0A6J1CI57 pentatricopeptide repeat-containing protein At4g211901.42e-242100Show/hide
Query:  MELWKTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKE
        MELWKTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKE
Subjt:  MELWKTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKE

Query:  EVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYY
        EVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYY
Subjt:  EVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYY

Query:  DQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAE
        DQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAE
Subjt:  DQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAE

Query:  TVSKDSSLEDEEMREDPDEILEDESKLEAPDFEYNFMGYGRL
        TVSKDSSLEDEEMREDPDEILEDESKLEAPDFEYNFMGYGRL
Subjt:  TVSKDSSLEDEEMREDPDEILEDESKLEAPDFEYNFMGYGRL

A0A6J1G1Y3 pentatricopeptide repeat-containing protein At4g211901.98e-18783.43Show/hide
Query:  MAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MAHS V ASLSS+ ASNRM TLIYSFPVISK IESVKFS  ASS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVF
        ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALA DGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYY++ MHDKLFE+F
Subjt:  ELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVF

Query:  ADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAETVSKDSSLEDE
        ADMEELGVQP+  IVT +GNVFQ+LGM DKYEKLKKKYPP KWEYRY++GKRV+IRAK L+E G+SNNGS ELD+K+ SS + LLEE E  S+DSSLED+
Subjt:  ADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAETVSKDSSLEDE

Query:  EMREDPDEILEDESK-LEAPDFEYNFMGYGRL
        EM EDPDE LEDES  L+   FE++FMG+G+L
Subjt:  EMREDPDEILEDESK-LEAPDFEYNFMGYGRL

A0A6J1HWS4 pentatricopeptide repeat-containing protein At4g211903.98e-18882.75Show/hide
Query:  KTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSW--SASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEV
        KTFL  SSMAHS V ASLSS+ ASNRM TLIYSFPVISK IESVKFS   SA S+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEV
Subjt:  KTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSW--SASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEV

Query:  YGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQ
        YGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYY++
Subjt:  YGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQ

Query:  GMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAET
         MHDKLFE+FADMEELGVQP+  IVTM+G+VFQ+LGM DK EKLKKKYPP KWEYRY++GKRV+IRAK L+E G+SNNGS ELD+K+ SS + LLEE ET
Subjt:  GMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIK-LLEEAET

Query:  VSKDSSLEDEEMREDPDEILEDESKL-EAPDFEYNFMGYGRL
         S+DSSLED+EM ED DE+LEDES L +   FE++FMG+G+L
Subjt:  VSKDSSLEDEEMREDPDEILEDESKL-EAPDFEYNFMGYGRL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.5e-4345.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

Q8LG95 Pentatricopeptide repeat-containing protein At4g211904.6e-9862.62Show/hide
Query:  MRTLIYSFP--VISKRIESVK-FSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        M +L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MRTLIYSFP--VISKRIESVK-FSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIV
        LE ++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF ++LE  PR FF+KMIS+YY + MH KLFEVFADMEELGV+PN  IV
Subjt:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIV

Query:  TMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEE-AETVSKDSSLEDEEMREDPDEILEDESK
        +M+G VF +L M DKYEKL KKYPP +WE+RY+KG+RV+++AK LNE      G S  + K D+ I+  EE  E +S++   E E +     +I   E  
Subjt:  TMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEE-AETVSKDSSLEDEEMREDPDEILEDESK

Query:  LEAPD
        L+  D
Subjt:  LEAPD

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein1.8e-4445.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein1.8e-4445.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein1.8e-4445.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein1.8e-4445.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein3.2e-9962.62Show/hide
Query:  MRTLIYSFP--VISKRIESVK-FSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        M +L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MRTLIYSFP--VISKRIESVK-FSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIV
        LE ++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF ++LE  PR FF+KMIS+YY + MH KLFEVFADMEELGV+PN  IV
Subjt:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIV

Query:  TMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEE-AETVSKDSSLEDEEMREDPDEILEDESK
        +M+G VF +L M DKYEKL KKYPP +WE+RY+KG+RV+++AK LNE      G S  + K D+ I+  EE  E +S++   E E +     +I   E  
Subjt:  TMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEE-AETVSKDSSLEDEEMREDPDEILEDESK

Query:  LEAPD
        L+  D
Subjt:  LEAPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTATGGAAAACATTTTTACTTCGTTCTTCAATGGCGCATTCTCCAGTCCAAGCATCGCTCTCGTCCTCCTCGGCTTCCAACCGGATGCGTACTTTGATTTACTC
TTTTCCAGTCATATCCAAAAGGATAGAATCTGTTAAATTTTCCTGGAGTGCAAGCAGTACAGTGGTATGCGCTGCAAAAGGTCCACGGCCGAGATATCCTCGGGTTTGGA
AAACCCGAAAGAGAATTGGAACCATATCCAAGGCAGCAAAGCTTGTTGATTGTGTCAAGGGACTGTCTAACGTCAAAGAGGAAGTTTATGGGGCTCTTGATTCCTTCATA
GCCTGGGAACTAGAGTTTCCTCTTATTACTGTAAAGAAGGCCCTGAAGACCTTAGAGATTCAAAGAGAATGGAAGAGGATAATCCAGTTGACAAAATGGATGTTAAGTAA
AGGCCAAGGAAGAACAATGGGAAGCTATTTCACATTACTAAATGCCTTAGCTGAAGATGGAAGACTCGATGAAGCCGAAGAGCTTTGGAACAAATTGTTTTCTCAGTATC
TGGAGAGCATGCCTCGGATGTTCTTTCATAAAATGATATCCCTCTATTATGACCAGGGCATGCACGACAAGTTATTCGAGGTATTTGCTGACATGGAAGAACTTGGAGTT
CAACCAAATACGGAAATTGTCACTATGATAGGAAATGTCTTCCAAGAGTTGGGTATGTTTGATAAATATGAAAAGCTGAAGAAGAAATATCCTCCACTAAAATGGGAGTA
TCGATACGTTAAAGGAAAGCGTGTAAGAATACGAGCGAAGTACCTGAACGAATATGGTAATTCCAACAATGGTTCAAGTGAGCTGGACCAAAAAGATGACAGTTCAATCA
AACTACTGGAGGAAGCTGAAACAGTTTCTAAGGATTCTAGTCTTGAAGATGAGGAAATGAGGGAAGACCCAGATGAAATATTGGAAGATGAAAGTAAGTTGGAGGCACCC
GATTTTGAATACAATTTCATGGGGTATGGGCGATTGTAA
mRNA sequenceShow/hide mRNA sequence
TGGAAACAGAAAATATCGAGAAAACAGAACGGAAAATGGGAGATGGAATTATGGAAAACATTTTTACTTCGTTCTTCAATGGCGCATTCTCCAGTCCAAGCATCGCTCTC
GTCCTCCTCGGCTTCCAACCGGATGCGTACTTTGATTTACTCTTTTCCAGTCATATCCAAAAGGATAGAATCTGTTAAATTTTCCTGGAGTGCAAGCAGTACAGTGGTAT
GCGCTGCAAAAGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCCGAAAGAGAATTGGAACCATATCCAAGGCAGCAAAGCTTGTTGATTGTGTCAAGGGACTGTCT
AACGTCAAAGAGGAAGTTTATGGGGCTCTTGATTCCTTCATAGCCTGGGAACTAGAGTTTCCTCTTATTACTGTAAAGAAGGCCCTGAAGACCTTAGAGATTCAAAGAGA
ATGGAAGAGGATAATCCAGTTGACAAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAATGGGAAGCTATTTCACATTACTAAATGCCTTAGCTGAAGATGGAAGACTCG
ATGAAGCCGAAGAGCTTTGGAACAAATTGTTTTCTCAGTATCTGGAGAGCATGCCTCGGATGTTCTTTCATAAAATGATATCCCTCTATTATGACCAGGGCATGCACGAC
AAGTTATTCGAGGTATTTGCTGACATGGAAGAACTTGGAGTTCAACCAAATACGGAAATTGTCACTATGATAGGAAATGTCTTCCAAGAGTTGGGTATGTTTGATAAATA
TGAAAAGCTGAAGAAGAAATATCCTCCACTAAAATGGGAGTATCGATACGTTAAAGGAAAGCGTGTAAGAATACGAGCGAAGTACCTGAACGAATATGGTAATTCCAACA
ATGGTTCAAGTGAGCTGGACCAAAAAGATGACAGTTCAATCAAACTACTGGAGGAAGCTGAAACAGTTTCTAAGGATTCTAGTCTTGAAGATGAGGAAATGAGGGAAGAC
CCAGATGAAATATTGGAAGATGAAAGTAAGTTGGAGGCACCCGATTTTGAATACAATTTCATGGGGTATGGGCGATTGTAAATATACATATTTCTCATATGAAAAATCGC
CCTCAATTTGTAGTGTAGACTTCTAATAAGATTTTTGTAATTTGAACAGATCATAGAGCCAATTCTCTTTATTTCAGCCTTCAATATTATAATGCTCGATCGAGCGTATG
ACCTAGGCTTATGATAAACAAGATGAATCCAGGAGTTGTATCAATTATTGGTTTAAATTGTCATTGACATGATTGGAAGGGTT
Protein sequenceShow/hide protein sequence
MELWKTFLLRSSMAHSPVQASLSSSSASNRMRTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGV
QPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDEEMREDPDEILEDESKLEAP
DFEYNFMGYGRL