CuGenDBv2

Gene ID	MC10g0149
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1
Genome location	MC10:1080455..1086222
RNA-Seq Expression	MC10g0149
Synteny	MC10g0149
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044970 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_016899091.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis melo]

2.22e-170

85.42

Show/hide

Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        M  SI SP+PL +LTS   FRAK+++KAPA+SARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAA TTPAQLRTEA
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
        LG+SLAAFSIALPYLGKFLKGAVPSGEA+LPEGTEQIF+LSQ VSDN+KED+AWATYILLRNTNSISVLIQ +G LCVRGYWNSPNDI  ADL+AWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
        LQSIGLSAL D +YFPQIS+S LW+MLP GTRSVLVQPV    KQSGN+MEK+GGFILLASSLSYAFSDKDRAWIRALANKF DR IL
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL

XP_022141087.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Momordica charantia]

3.29e-203

100

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Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
        LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
        LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL

XP_022141091.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Momordica charantia]

7.01e-181

91.55

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Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQL    
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
                            GAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
        LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL

XP_023542853.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo]

8.40e-170

85.02

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Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        M+ +ILSP+PLIRL+ST RFRAK   K+P ++ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAAP T AQLRTEA
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
        LG+SLAAFSIALPYLGKFL+GAVPSGEA+LPEG EQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLIQI+GELCVRGYWNSPNDI G DL+AWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDI
        LQSIGLSALND LYFPQIS+S LW+MLP GTRSVLVQPV     QSGN+MEKIGGFIL+ASSLSYAFSDKDRAWIRALA KF + DI
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDI

XP_038884000.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Benincasa hispida]

1.28e-169

85.76

Show/hide

Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        M  SI SP+PL RLTS  RFRAKT+ K PA+SARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAA TTPAQLRTEA
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
        LG+SLAAFSIALPYLGKFLKGAVPSGEA+LP  TEQIF+LSQ VSDNVKEDLAWATYILLRNTNSISVLIQI+G LCVRGYWNSPNDI GADL+AWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
        LQ IGLSAL D LYFPQIS+S LW+MLP GTRSVLVQPV    KQ+G++MEK+GGFILLASSLSYAF DKDRAWIRALANKF DR IL
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DSW9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

1.08e-170

85.42

Show/hide

Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        M  SI SP+PL +LTS   FRAK+++KAPA+SARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAA TTPAQLRTEA
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
        LG+SLAAFSIALPYLGKFLKGAVPSGEA+LPEGTEQIF+LSQ VSDN+KED+AWATYILLRNTNSISVLIQ +G LCVRGYWNSPNDI  ADL+AWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
        LQSIGLSAL D +YFPQIS+S LW+MLP GTRSVLVQPV    KQSGN+MEK+GGFILLASSLSYAFSDKDRAWIRALANKF DR IL
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL

A0A5A7SUJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2

1.08e-170

85.42

Show/hide

Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        M  SI SP+PL +LTS   FRAK+++KAPA+SARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAA TTPAQLRTEA
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
        LG+SLAAFSIALPYLGKFLKGAVPSGEA+LPEGTEQIF+LSQ VSDN+KED+AWATYILLRNTNSISVLIQ +G LCVRGYWNSPNDI  ADL+AWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
        LQSIGLSAL D +YFPQIS+S LW+MLP GTRSVLVQPV    KQSGN+MEK+GGFILLASSLSYAFSDKDRAWIRALANKF DR IL
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL

A0A6J1CHZ5 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2

3.39e-181

91.55

Show/hide

Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQL    
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
                            GAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
        LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL

A0A6J1CJH9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

1.59e-203

100

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Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
        LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
        LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL

A0A6J1G0N4 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

9.14e-170

84.67

Show/hide

Query:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA
        M+ +ILSP+PLIRL+STPRFRAK   K+P ++ARLDDSKNS ++QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GS+SAAP T AQLRTEA
Subjt:  MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEA

Query:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ
        LG+SLAAFSIALPYLGKFL+GAVPSGEA+LPEG EQIFVLSQ+VSDNVK+DLAWATYILLRNTNSISVLIQI+GELCVRGYWNSPNDI GADL+AWFEEQ
Subjt:  LGLSLAAFSIALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQ

Query:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDI
        LQSIGLSALND LYFPQIS+S LW+MLP GTRSVLVQPV     QSGN+MEKIGGFIL+ASSLSYAFSDKDRAWIRALA KF + DI
Subjt:  LQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDI

SwissProt top hits

e value

%identity

Alignment

Q9FJ81 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

7.7e-83

58.78

Show/hide

Query:  PRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSIALPYLGK
        PR +  TR+ A   +        +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++AP + +Q+R+EALGLSLAAFSIALPY+GK
Subjt:  PRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSIALPYLGK

Query:  FLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQ
        FLKG+V   + SLPE  EQ+FV+S N+ D++KEDLAWATY+LLRNT++I+VLI ++GELCVRGYWN P+ +  A L  WF++++  IGL+ + + LYFPQ
Subjt:  FLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQ

Query:  ISDSEL-WKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKF
         + S L   +LP+GTRS+ VQP+ Q+ N+ +K+ GF+L+AS+  YA+SDKDRAWI A+A KF
Subjt:  ISDSEL-WKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKF

Arabidopsis top hits

e value

%identity

Alignment

AT5G52110.1 Protein of unknown function (DUF2930)

5.5e-84

58.78

Show/hide

Query:  PRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSIALPYLGK
        PR +  TR+ A   +        +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++AP + +Q+R+EALGLSLAAFSIALPY+GK
Subjt:  PRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSIALPYLGK

Query:  FLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQ
        FLKG+V   + SLPE  EQ+FV+S N+ D++KEDLAWATY+LLRNT++I+VLI ++GELCVRGYWN P+ +  A L  WF++++  IGL+ + + LYFPQ
Subjt:  FLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQ

Query:  ISDSEL-WKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKF
         + S L   +LP+GTRS+ VQP+ Q+ N+ +K+ GF+L+AS+  YA+SDKDRAWI A+A KF
Subjt:  ISDSEL-WKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKF

AT5G52110.2 Protein of unknown function (DUF2930)

5.5e-84

58.78

Show/hide

Query:  PRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSIALPYLGK
        PR +  TR+ A   +        +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++AP + +Q+R+EALGLSLAAFSIALPY+GK
Subjt:  PRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSIALPYLGK

Query:  FLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQ
        FLKG+V   + SLPE  EQ+FV+S N+ D++KEDLAWATY+LLRNT++I+VLI ++GELCVRGYWN P+ +  A L  WF++++  IGL+ + + LYFPQ
Subjt:  FLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQ

Query:  ISDSEL-WKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKF
         + S L   +LP+GTRS+ VQP+ Q+ N+ +K+ GF+L+AS+  YA+SDKDRAWI A+A KF
Subjt:  ISDSEL-WKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACCGGCTCAATTCTCTCTCCCAACCCGTTAATTCGGTTGACATCCACTCCCCGATTTCGCGCTAAAACTAGGCTGAAGGCTCCAGCAGTTTCTGCTCGTCTCGACGA
TTCTAAGAACTCGGCTAATCAGCAACTTAATCTCTCTGTCCTTCGATTCACGCTCGGGATTCCTGGATTGGACGAGTCTTACTTACCTAGATGGATCGGTTATGGATTTG
GTTCACTTCTTCTCCTGAACCACTTTTTTGGTTCGAATTCAGCTGCTCCCACCACCCCAGCGCAGTTAAGGACTGAGGCTTTAGGCCTTTCCTTGGCAGCATTTTCTATT
GCACTCCCCTACTTGGGAAAGTTTCTTAAGGGTGCAGTTCCATCAGGCGAAGCTAGCCTGCCTGAAGGCACTGAGCAAATATTTGTCCTGTCTCAAAATGTATCAGATAA
TGTAAAGGAAGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAATAGTATATCAGTGTTAATACAAATTCGAGGGGAATTATGTGTTCGAGGATACTGGAATA
GTCCAAATGATATATGCGGAGCAGATTTAGTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGTCTGTCTGCATTAAATGATGACCTCTATTTCCCTCAGATTTCAGAT
TCTGAACTCTGGAAAATGCTGCCCAATGGCACTCGCTCAGTTTTAGTACAGCCAGTGAAACAAAGTGGCAACAAGATGGAAAAGATTGGTGGATTCATATTGCTGGCTTC
AAGTTTAAGTTATGCCTTTAGCGACAAAGACAGAGCCTGGATAAGAGCTCTTGCAAACAAGTTCATAGATAGGGACATACTCTGA

mRNA sequence

Show/hide mRNA sequence

GTTTCAATTTGATTAAAATTCTGCATCGAGCCCAGAGATAATGTAATCTGTAAACAAGTTCGTCAAATTGAGACAGATTGAAGGGGTTTGGATGTGGATCAAACAGCGAA
GCGTCCAGCTCCAGCCCACAAACCCTCAATACTGAAATTTAGAGATTTTCTAATGTAATTCGTTTTCTCGGTTGCCAATCATGACCGGCTCAATTCTCTCTCCCAACCCG
TTAATTCGGTTGACATCCACTCCCCGATTTCGCGCTAAAACTAGGCTGAAGGCTCCAGCAGTTTCTGCTCGTCTCGACGATTCTAAGAACTCGGCTAATCAGCAACTTAA
TCTCTCTGTCCTTCGATTCACGCTCGGGATTCCTGGATTGGACGAGTCTTACTTACCTAGATGGATCGGTTATGGATTTGGTTCACTTCTTCTCCTGAACCACTTTTTTG
GTTCGAATTCAGCTGCTCCCACCACCCCAGCGCAGTTAAGGACTGAGGCTTTAGGCCTTTCCTTGGCAGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTAAG
GGTGCAGTTCCATCAGGCGAAGCTAGCCTGCCTGAAGGCACTGAGCAAATATTTGTCCTGTCTCAAAATGTATCAGATAATGTAAAGGAAGACTTGGCTTGGGCAACATA
CATCTTGCTGCGCAATACAAATAGTATATCAGTGTTAATACAAATTCGAGGGGAATTATGTGTTCGAGGATACTGGAATAGTCCAAATGATATATGCGGAGCAGATTTAG
TTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGTCTGTCTGCATTAAATGATGACCTCTATTTCCCTCAGATTTCAGATTCTGAACTCTGGAAAATGCTGCCCAATGGC
ACTCGCTCAGTTTTAGTACAGCCAGTGAAACAAAGTGGCAACAAGATGGAAAAGATTGGTGGATTCATATTGCTGGCTTCAAGTTTAAGTTATGCCTTTAGCGACAAAGA
CAGAGCCTGGATAAGAGCTCTTGCAAACAAGTTCATAGATAGGGACATACTCTGAAATTCATGGGGAACTAAGCTGAGATGGTCGCTCTGTCGAATGAATAGCAGAGATT
GGGCTAATGGGTTGAAGCTTCACAAAAATTTCTCCAAGCCGTACACCAAACTCTGACACAGAAGCAAAGAAAGGAAACAGTCTGACATTTTCAATACTGGATGAATAAGA
TTATTCAAGAAAATTGAAGATGTATATATTGTCGTGTGTTGAGGTACCTTAAGGCGCACCACCTTTCTAATTGCCAATAACAAGCCAGGCATGAGGCATTGCACATTTAT
GATATCATGTTTGAGAGTGTAAACCTGTGATGCAAGCCAGGGTAAGTGTTGGAGAAGGAAAAAACCAACCAGTCTCGTTTCAGAATGAATTGAAAAGATAAAATTCACCA
TACGCTACAGCTTGAGCTCACGGAATTTCTTAATTTTAGTTAGATGAGGATAGAAACACAATCTTGTACTCACCTCTCCCGGGCGAGAGAAGTAGACATTGGTGCTGGAA
GGAAGTCCTGGAAGGACTAGGCTGTGAACTCGAACTCCATCTTCTCCAACAACTTGACCCCTTGCCTTGCAAGGAGAAAGGCAAAATAAGCAAGCTAGTCCTTTACATGG
GTTTCTAAGTTTGATGTCTTAGCCATCAGTATGATGAATTCTCATCATATTTCTAGAAGTTCTACGCCAATCTTGTACATGTAGTTGGGTTCTTGTTGGTCAAATTTCTT
TAATTCATGTCATATGCATAAGTTTTTTCTCTCATATTCTTTGAAATTAAAAGATAGTTATATGATGTGAAAGTTAAGAGAATTCAGTGGTCTCATATTTTACTTTTACC
TTCTGTCTCTCTATTCTTAATGAGTACTGATCCATCAAATTAAATGAGGCAGAGACTACTCATATGGAGTCAGCTTACCACAACTTCTGTTGAAATATCTTCTCTGTTGT
AGATCTGGCCCAAGTTTGAGAGGTTGTTGGCTATTTGGGCTGCATCTGAAGATGGCAGATCCTGCCACCCAAAAAGTCAGTATTTAATGTCCATCTGCCACATTTACTGC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAACCTTCCAATGGTATTTTTAATACACAAATGAAAGTGGGAAGGCTAAAAGTTGTTTACTTGATTCAGATG
TTTAACTAACCCAATGTAGGTGAGTGAGAAGAAGGCATGTTGATTTGTCGTATTTAATGACAAAGGTCACGAAGCCTTGTTTAAAGACGATGAAATGGAAAGCTTGCTGG
AGAAGAATAGAACCAATGGACAGAGTTGGGGCGACAAGACAACCCTGTAACAAGAACCATAAAAGCATTCATACAGGGAGAGAGAGAGAGAAGAGAGAGAGAGGGTTGAA
TTAAAATCTCACCCTGTGCTCACCATGCTAGCTTTCTCACAGAAGTTGGATAATGCAGCCACTGTGTCCACTTCTAATCTGGGCACATAAACCACACTTCTCATGCCAAA
TGCAGCTGCC

Protein sequence

Show/hide protein sequence

MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSI
ALPYLGKFLKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQISD
SELWKMLPNGTRSVLVQPVKQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL

MC10g0149 (gene) of Bitter gourd (Dali-11) v1 genome