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MC10g0163 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0163
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLysM domain-containing protein
Genome locationMC10:1163383..1163697
RNA-Seq ExpressionMC10g0163
SyntenyMC10g0163
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR018392 - LysM domain
IPR036779 - LysM domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576752.1 hypothetical protein SDJN03_24326, partial [Cucurbita argyrosperma subsp. sororia]1.26e-5379.05Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDG-RLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIS
        SSR   DVVSWYCA+ +L LILIGSIRE++ S+ +ADDG ++ RGNL+ GR CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKIIS
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDG-RLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIS

Query:  SSNPP
        S NPP
Subjt:  SSNPP

XP_004150301.1 uncharacterized protein LOC101210054 [Cucumis sativus]2.25e-5383.17Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
        SSRP  DVVSWYCAVG+L LILIGSIRE++ S     DGRL RGNLV  RPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKII+S
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS

Query:  S
        S
Subjt:  S

XP_008439155.1 PREDICTED: uncharacterized protein LOC103484036 [Cucumis melo]4.41e-5484.16Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
        SSRP  DVVSWYCAVG+L LILIGSIRE++ S+G  D GR  RGNLV  RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKII+S
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS

Query:  S
        S
Subjt:  S

XP_022157015.1 uncharacterized protein LOC111023841 [Momordica charantia]7.67e-7199.05Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
        SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS

Query:  SNPPN
        SNP N
Subjt:  SNPPN

XP_022985106.1 uncharacterized protein LOC111483184 [Cucurbita maxima]8.62e-5479.81Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
        SSR   DVVSWYCAV +L LILIGSIRE++ SA A D  ++ RGNL+ GR CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKIISS
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS

Query:  SNPP
         NPP
Subjt:  SNPP

TrEMBL top hitse value%identityAlignment
A0A0A0L5R9 LysM domain-containing protein1.09e-5383.17Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
        SSRP  DVVSWYCAVG+L LILIGSIRE++ S     DGRL RGNLV  RPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKII+S
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS

Query:  S
        S
Subjt:  S

A0A1S3AXP2 uncharacterized protein LOC1034840362.13e-5484.16Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
        SSRP  DVVSWYCAVG+L LILIGSIRE++ S+G  D GR  RGNLV  RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKII+S
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS

Query:  S
        S
Subjt:  S

A0A5A7VAP9 Peptidoglycan-binding LysM domain-containing protein2.13e-5484.16Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
        SSRP  DVVSWYCAVG+L LILIGSIRE++ S+G  D GR  RGNLV  RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKII+S
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS

Query:  S
        S
Subjt:  S

A0A6J1DRZ3 uncharacterized protein LOC1110238413.72e-7199.05Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
        SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS

Query:  SNPPN
        SNP N
Subjt:  SNPPN

A0A6J1J769 uncharacterized protein LOC1114831844.17e-5479.81Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS
        SSR   DVVSWYCAV +L LILIGSIRE++ SA A D  ++ RGNL+ GR CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKIISS
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISS

Query:  SNPP
         NPP
Subjt:  SNPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52790.1 peptidoglycan-binding LysM domain-containing protein1.9e-2149.04Show/hide
Query:  SSRPQTDVVSWYCAVGMLALILIGSIR----ESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIK
        SS    + +SWYCAV    ++L+ S +     ST          +  G   R   CDEIY V EGETL TIS+KCGDP+IVE NPHIHD DD+FPGL+I+
Subjt:  SSRPQTDVVSWYCAVGMLALILIGSIR----ESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIK

Query:  IISS
        I  S
Subjt:  IISS

AT4G25433.1 peptidoglycan-binding LysM domain-containing protein1.5e-2657.73Show/hide
Query:  QTDVVSWYCAVGMLALILIGSIREST-YSAGAADDGR---LARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI
        +++ V+ YC V +L L L GS++ S    +G    GR   + RG  +  RPC+E+YVVGEG+TLH+IS+KCGDPFIVERNPHIHDPDDVFPGL+IK+
Subjt:  QTDVVSWYCAVGMLALILIGSIREST-YSAGAADDGR---LARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI

AT5G62150.1 peptidoglycan-binding LysM domain-containing protein1.0e-2761.96Show/hide
Query:  TDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI
        +D+ +W  AV +L+LIL+ S+RE+  S          RG+    +PC+EIY+VGEGETLHTI DKCGDPFIVERNPHIHDPDDVFPGLV+KI
Subjt:  TDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTTCACGGCCCCAAACCGACGTCGTCTCATGGTACTGCGCCGTGGGCATGCTGGCCTTGATCTTGATCGGGTCGATCAGAGAAAGCACCTACTCCGCCGGCGCCGCCGA
TGACGGCCGGCTGGCCAGAGGAAACTTGGTCAGGGGGCGGCCGTGCGACGAGATATATGTGGTCGGAGAAGGGGAAACGCTGCACACCATCAGCGACAAGTGCGGCGACC
CGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCGGATGACGTCTTCCCCGGCTTGGTCATCAAAATCATCTCCTCCTCCAACCCTCCCAAC
mRNA sequenceShow/hide mRNA sequence
TCTTCACGGCCCCAAACCGACGTCGTCTCATGGTACTGCGCCGTGGGCATGCTGGCCTTGATCTTGATCGGGTCGATCAGAGAAAGCACCTACTCCGCCGGCGCCGCCGA
TGACGGCCGGCTGGCCAGAGGAAACTTGGTCAGGGGGCGGCCGTGCGACGAGATATATGTGGTCGGAGAAGGGGAAACGCTGCACACCATCAGCGACAAGTGCGGCGACC
CGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCGGATGACGTCTTCCCCGGCTTGGTCATCAAAATCATCTCCTCCTCCAACCCTCCCAAC
Protein sequenceShow/hide protein sequence
SSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISSSNPPN