; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g0259 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0259
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPolyadenylate-binding protein, putative
Genome locationMC10:2015135..2019060
RNA-Seq ExpressionMC10g0259
SyntenyMC10g0259
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011653101.1 polyadenylate-binding protein 1 isoform X1 [Cucumis sativus]1.22e-14192.24Show/hide
Query:  PAIEGP----SETEMEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQE
        P+IEGP    SETEME N++Y+EHEHEVYGGDIPDD E+DADLDMSSGRADEEGY+AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQE
Subjt:  PAIEGP----SETEMEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQE

Query:  DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK
        DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK
Subjt:  DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK

Query:  QYRGRRPSSFGFRGGRRPFMPAAPFYPSYGYG
        QYRGRRP+ FGFRG RRPF+P AP YPSYGYG
Subjt:  QYRGRRPSSFGFRGGRRPFMPAAPFYPSYGYG

XP_022141261.1 polyadenylate-binding protein 1-like isoform X1 [Momordica charantia]1.57e-149100Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPFMPAAPFYPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

XP_022141262.1 polyadenylate-binding protein 1-like isoform X2 [Momordica charantia]4.15e-14799.54Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPFMPAAPFYPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

XP_023551769.1 polyadenylate-binding protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.80e-14092.11Show/hide
Query:  IEGP--SETEMEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSS
        IEGP  +ETEM+ NFNY+EH+HEVYGGDIPDD EMDADLDMSSGRADEE YEAEPS+ANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSS
Subjt:  IEGP--SETEMEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSS

Query:  TSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRG
        TSATQAEKEE DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDA+QNALLLNESELHGRQLKVSAKRTNVPGMKQ+RG
Subjt:  TSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRG

Query:  RRPSSFGFRGGRRPFMPAAPFYPSYGYG
        RRP+SFGFRG RRPF+P+APF PSYGYG
Subjt:  RRPSSFGFRGGRRPFMPAAPFYPSYGYG

XP_038876136.1 polyadenylate-binding protein 1-like isoform X1 [Benincasa hispida]8.29e-14096.33Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME NFNY+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY+AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ FGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
         RRPFMPAAP YPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

TrEMBL top hitse value%identityAlignment
A0A1S3BYF0 polyadenylate-binding protein 1-like isoform X22.70e-13894.95Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME N+NY+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY+AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ FGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
         RRPF P AP YPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

A0A6J1CIL8 polyadenylate-binding protein 1-like isoform X17.59e-150100Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPFMPAAPFYPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

A0A6J1CJE1 polyadenylate-binding protein 1-like isoform X22.01e-14799.54Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPFMPAAPFYPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

A0A6J1FT42 polyadenylate-binding protein 1-like isoform X17.14e-13994.52Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYE-AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
        MEHNFNY+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY+ AEP+NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYE-AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE

Query:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFR
        EVD+RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ +GFR
Subjt:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFR

Query:  GGRRPFMPAAPFYPSYGYG
        G RRPFM  APFYPSYGYG
Subjt:  GGRRPFMPAAPFYPSYGYG

A0A6J1J6L4 polyadenylate-binding protein 1-like isoform X14.64e-13792.66Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        M+ NFNY+EH+HEVYGGDIPDD EMDADLDMSSGRADEE Y+AEPS+ANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
         DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDA+QNALLLNESELHGRQLKVSAKRTNVPGMKQ+RGRRP+SFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
         RRPF+P+APF PSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 23.3e-3653.57Show/hide
Query:  NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKG
        +   K+L +MK R+ E+E EA  LR MQ +++ E          T A + +KE +D++SVYVGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF GHPKG
Subjt:  NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKG

Query:  FAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK------QYRGRRPSSFGFRGGRRPFMP
        FAY+EF E   V NALLLN S LH R LKV+ KRTNVPGM       + RGR     G+RG  R F P
Subjt:  FAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK------QYRGRRPSSFGFRGGRRPFMP

Q28ZX3 Polyadenylate-binding protein 22.5e-3147.85Show/hide
Query:  EAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEM-GAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF
        E E S     +LE +K R+KE+EEEA  +++MQ++V+K+M G      ++   +  EK+E+D+RSVYVGNVDY  + EE++ HF  CGT+NRVTIL +K 
Subjt:  EAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEM-GAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF

Query:  -GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR
         GHPKGFAY+EF   + V+ AL +NE+   GRQ+KV +KRTN PG+         SF  RG R
Subjt:  -GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR

Q93VI4 Polyadenylate-binding protein 11.3e-7270.64Show/hide
Query:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV
        ++E EHEVYGG+IP++ E + D +       EEG      E EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEV
Subjt:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRG
        DSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR 
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
          R FMP  PFYP Y YG
Subjt:  GRRPFMPAAPFYPSYGYG

Q9FJN9 Polyadenylate-binding protein 26.2e-6766.82Show/hide
Query:  EEHEHEVYGGDIPDDGEMDADL-----DMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVD
        EE EHEVYGG+IPD GEMD D+     D+    AD++           K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVD
Subjt:  EEHEHEVYGGDIPDDGEMDADL-----DMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVD

Query:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR
        +RSV+VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR + +     R
Subjt:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR

Query:  RPFMPAAPF-YPSYGYG
        RPFM  +P+ Y  YGYG
Subjt:  RPFMPAAPF-YPSYGYG

Q9LX90 Polyadenylate-binding protein 34.0e-6669.77Show/hide
Query:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        EE EHEVYGG+IP+ G+ D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY  GR   S G+R  RR
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR

Query:  PFMPAAPFYPSYGYG
        PF+P   FY  YGYG
Subjt:  PFMPAAPFYPSYGYG

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-6769.77Show/hide
Query:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        EE EHEVYGG+IP+ G+ D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY  GR   S G+R  RR
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR

Query:  PFMPAAPFYPSYGYG
        PF+P   FY  YGYG
Subjt:  PFMPAAPFYPSYGYG

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-6769.77Show/hide
Query:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        EE EHEVYGG+IP+ G+ D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY  GR   S G+R  RR
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR

Query:  PFMPAAPFYPSYGYG
        PF+P   FY  YGYG
Subjt:  PFMPAAPFYPSYGYG

AT5G51120.1 polyadenylate-binding protein 19.2e-7470.64Show/hide
Query:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV
        ++E EHEVYGG+IP++ E + D +       EEG      E EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEV
Subjt:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRG
        DSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR 
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
          R FMP  PFYP Y YG
Subjt:  GRRPFMPAAPFYPSYGYG

AT5G51120.2 polyadenylate-binding protein 12.6e-6859.45Show/hide
Query:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------
        ++E EHEVYGG+IP++ E + D +       EEG      E EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q                
Subjt:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------

Query:  --------------------EDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE
                            ++  ++  + AEKEEVDSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNE
Subjt:  --------------------EDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE

Query:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRGGRRPFMPAAPFYPSYGYG
        SELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR   R FMP  PFYP Y YG
Subjt:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRGGRRPFMPAAPFYPSYGYG

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.4e-6866.82Show/hide
Query:  EEHEHEVYGGDIPDDGEMDADL-----DMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVD
        EE EHEVYGG+IPD GEMD D+     D+    AD++           K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVD
Subjt:  EEHEHEVYGGDIPDDGEMDADL-----DMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVD

Query:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR
        +RSV+VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR + +     R
Subjt:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR

Query:  RPFMPAAPF-YPSYGYG
        RPFM  +P+ Y  YGYG
Subjt:  RPFMPAAPF-YPSYGYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAGCGATCGAGGGGCCATCGGAGACGGAGATGGAGCACAATTTTAACTACGAAGAGCACGAACACGAAGTCTATGGAGGCGATATTCCCGACGACGGAGAGATGGATGC
CGACCTCGACATGTCCTCTGGTAGGGCCGACGAAGAGGGTTACGAGGCCGAGCCCAGTAACGCCAACTCCAAGGACTTGGAGGACATGAAAAGGAGGCTCAAGGAGATCG
AGGAGGAAGCCGGTGCCCTTCGGGAAATGCAGGCCAAGGTTGAGAAGGAGATGGGTGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACTCAGGCTGAAAAGGAGGAA
GTAGATTCCCGATCTGTATATGTTGGTAATGTTGATTATGCATGCACTCCTGAGGAGGTTCAACAACATTTTCAATCATGTGGAACAGTGAATAGAGTGACAATTTTGAC
AGACAAGTTCGGTCACCCTAAGGGATTTGCTTATGTTGAGTTTGTGGAGGTTGATGCCGTACAGAATGCTTTGCTGTTGAATGAATCAGAGTTGCACGGTCGCCAACTAA
AGGTCTCTGCCAAAAGGACAAATGTCCCTGGAATGAAGCAATACCGAGGAAGGCGGCCCAGCTCTTTTGGCTTTCGAGGTGGTCGTCGGCCCTTCATGCCTGCTGCACCC
TTTTATCCTTCATATGGTTATGGG
mRNA sequenceShow/hide mRNA sequence
CCAGCGATCGAGGGGCCATCGGAGACGGAGATGGAGCACAATTTTAACTACGAAGAGCACGAACACGAAGTCTATGGAGGCGATATTCCCGACGACGGAGAGATGGATGC
CGACCTCGACATGTCCTCTGGTAGGGCCGACGAAGAGGGTTACGAGGCCGAGCCCAGTAACGCCAACTCCAAGGACTTGGAGGACATGAAAAGGAGGCTCAAGGAGATCG
AGGAGGAAGCCGGTGCCCTTCGGGAAATGCAGGCCAAGGTTGAGAAGGAGATGGGTGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACTCAGGCTGAAAAGGAGGAA
GTAGATTCCCGATCTGTATATGTTGGTAATGTTGATTATGCATGCACTCCTGAGGAGGTTCAACAACATTTTCAATCATGTGGAACAGTGAATAGAGTGACAATTTTGAC
AGACAAGTTCGGTCACCCTAAGGGATTTGCTTATGTTGAGTTTGTGGAGGTTGATGCCGTACAGAATGCTTTGCTGTTGAATGAATCAGAGTTGCACGGTCGCCAACTAA
AGGTCTCTGCCAAAAGGACAAATGTCCCTGGAATGAAGCAATACCGAGGAAGGCGGCCCAGCTCTTTTGGCTTTCGAGGTGGTCGTCGGCCCTTCATGCCTGCTGCACCC
TTTTATCCTTCATATGGTTATGGG
Protein sequenceShow/hide protein sequence
PAIEGPSETEMEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGRRPFMPAAP
FYPSYGYG