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MC10g0367 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0367
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description40S ribosomal protein S29
Genome locationMC10:2961596..2961694
RNA-Seq ExpressionMC10g0367
SyntenyMC10g0367
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001209 - Ribosomal protein S14
IPR039744 - 40S ribosomal protein S29/30S ribosomal protein S14 type Z
IPR043140 - Ribosomal protein S14/S29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52774.1 hypothetical protein Csa_014474 [Cucumis sativus]5.68e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
PSS02036.1 40S ribosomal protein, partial [Actinidia chinensis var. chinensis]5.41e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
PSS02648.1 40S ribosomal protein S29, partial [Actinidia chinensis var. chinensis]5.41e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
XP_004491390.1 40S ribosomal protein S29 [Cicer arietinum]5.68e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
XP_021660587.1 40S ribosomal protein S29-like [Hevea brasiliensis]5.68e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
TrEMBL top hitse value%identityAlignment
A0A1S3V2W1 40S ribosomal protein S292.75e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
A0A2G9HKH9 40S ribosomal protein S292.75e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
A0A2R6Q585 40S ribosomal protein (Fragment)2.62e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
A0A2R6RGW4 40S ribosomal protein S29 (Fragment)2.62e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
A0A6J1JB08 40S ribosomal protein S292.75e-18100Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
SwissProt top hitse value%identityAlignment
P62273 40S ribosomal protein S293.2e-0978.79Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVC N HGLIRKYGL  CRQCFR  AK+IGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
P62274 40S ribosomal protein S293.2e-0978.79Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVC N HGLIRKYGL  CRQCFR  AK+IGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
P62276 40S ribosomal protein S293.2e-0978.79Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVC N HGLIRKYGL  CRQCFR  AK+IGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Q5I7K3 40S ribosomal protein S298.2e-1390.91Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Q680P8 40S ribosomal protein S296.3e-1393.94Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Arabidopsis top hitse value%identityAlignment
AT3G43980.1 Ribosomal protein S14p/S29e family protein4.5e-1493.94Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
AT3G44010.1 Ribosomal protein S14p/S29e family protein4.5e-1493.94Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
AT4G33865.1 Ribosomal protein S14p/S29e family protein4.5e-1493.94Show/hide
Query:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTAATGTGTTGCAGACAATGCTTCCGTAGCAATGCCAAGGAAATTGGCTTCATTAAG
mRNA sequenceShow/hide mRNA sequence
CGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTAATGTGTTGCAGACAATGCTTCCGTAGCAATGCCAAGGAAATTGGCTTCATTAAG
Protein sequenceShow/hide protein sequence
RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK