CuGenDBv2

Gene ID	MC10g0375
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	zinc finger SWIM domain-containing protein 7
Genome location	MC10:2989466..2990799
RNA-Seq Expression	MC10g0375
Synteny	MC10g0375
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0097196 - Shu complex (cellular component) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600296.1 Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia]

4.20e-79

90.15

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSAS + AEAVWKQI+STRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI G+PSGRSIFQVVGESRRKEEY CFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAASLGA IE KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

KAG7030956.1 Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma]

2.08e-79

90.15

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSAS + AEAVWKQI+STRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPSGRS+FQVVGESRRKEEY CFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAASLGA IE KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

XP_022149127.1 zinc finger SWIM domain-containing protein 7 [Momordica charantia]

2.96e-88

100

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAASLGAFIEAKVSDEELALLLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

XP_022942858.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata]

1.46e-79

90.91

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSAS + AEAVWKQI+STRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPSGRSIFQVVGESRRKEEY CFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAASLGA IE KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

XP_022983272.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima]

6.21e-81

91.67

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSAS +VAEAVWKQI+STRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAASLGA +E KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWG5 SWIM-type domain-containing protein

9.67e-78

89.39

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSAS +VAEAVWKQI+STR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKI G PS RSIFQVVGESRRKEEY CFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAAS+GA IE KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

A0A1S3BZP2 zinc finger SWIM domain-containing protein 7

4.79e-78

89.39

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSAS +VAEAVWK+I+STR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKI G PS RSIFQVVGESRRKEEYFCFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAAS+GA IE KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

A0A6J1D5Z4 zinc finger SWIM domain-containing protein 7

1.43e-88

100

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAASLGAFIEAKVSDEELALLLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

A0A6J1FSJ7 zinc finger SWIM domain-containing protein 7 isoform X2

7.09e-80

90.91

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSAS + AEAVWKQI+STRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPSGRSIFQVVGESRRKEEY CFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAASLGA IE KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

A0A6J1J6W2 zinc finger SWIM domain-containing protein 7 isoform X2

3.00e-81

91.67

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        MSAS +VAEAVWKQI+STRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLAASLGA +E KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G33925.1 unknown protein

1.3e-48

66.67

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        M+ + +VA+AVW  I+ST SVT++QLS+L  LFGKN E+ATRI+D+RGVKKI G PSGRSIFQVVGES+++EEY CFP ++C CYSFFYD V+RGE  CC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL
        KHQLAARLA+SLG + E +VSD+ LAL+LS +
Subjt:  KHQLAARLAASLGAFIEAKVSDEELALLLSNL

AT4G33925.2 unknown protein

3.4e-44

68.38

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Query:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC
        M+ + +VA+AVW  I+ST SVT++QLS+L  LFGKN E+ATRI+D+RGVKKI G PSGRSIFQVVGES+++EEY CFP ++C CYSFFYD V+RGE  CC
Subjt:  MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCC

Query:  KHQLAARLAASLGAFIE
        KHQLAARLA+SLG + E
Subjt:  KHQLAARLAASLGAFIE

Sequences

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CDS sequence

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ATGAGTGCGAGTGCTATGGTTGCTGAAGCGGTGTGGAAGCAGATCAAGTCCACTCGATCAGTGACTGATGATCAGCTTTCAGTCTTGCATTTCTTGTTCGGCAAGAACTT
CGAGCGAGCTACTCGAATCGTGGATCAAAGAGGGGTAAAAAAAATTTATGGGGAGCCCAGCGGACGGTCCATCTTCCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGT
ATTTCTGTTTCCCAGAAAATTTTTGTGCCTGTTATTCCTTTTTCTACGACACTGTGAACAGAGGAGAACAACTTTGCTGCAAGCATCAGTTAGCTGCTAGGCTTGCCGCT
TCGCTGGGGGCTTTTATTGAAGCTAAAGTATCTGATGAAGAGCTGGCCTTATTATTGTCCAATCTT

mRNA sequence

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Protein sequence

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MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCCKHQLAARLAA
SLGAFIEAKVSDEELALLLSNL

MC10g0375 (gene) of Bitter gourd (Dali-11) v1 genome