; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g0403 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0403
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA repair and recombination protein RAD54-like isoform 1
Genome locationMC10:3241282..3241710
RNA-Seq ExpressionMC10g0403
SyntenyMC10g0403
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600329.1 hypothetical protein SDJN03_05562, partial [Cucurbita argyrosperma subsp. sororia]3.46e-7077.7Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGE-SFPKLTKSSAGCW
        MDPRISFSNDF+ETQ PLKLENIYREAPVSSDFEF+VKDR MI ADEIF QGRLLPLKDSSR    KTTLRDEL+VNEDDD  + + SFPKLTK+    W
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGE-SFPKLTKSSAGCW

Query:  RERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        +E+FGFRRSH   +KQ R+EGVLKTV EE+K+SVFLHEDLINIARKNG
Subjt:  RERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

XP_011651245.1 uncharacterized protein LOC105434859 [Cucumis sativus]8.92e-7176.51Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTKSSAG-C
        MDPRISFSNDF+ET+QPLKLENIYREAPVSSDFEF+VKDR MI ADEIFFQG+LLPLKDS R     KTTLRDEL+VNE++D+    SFPK TK S+G C
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTKSSAG-C

Query:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        W+E+FGFR+SH   KKQSR+E VLKTV EE++TSVFLHEDLINIARKNG
Subjt:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

XP_022149273.1 uncharacterized protein LOC111017734 [Momordica charantia]1.46e-98100Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG
        MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG

Query:  FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
Subjt:  FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

XP_022983127.1 uncharacterized protein LOC111481767 [Cucurbita maxima]7.40e-7278.91Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR
        MDPRISFSNDF+ETQ PLKLENIYREAPVSSDFEF+VKDR MI ADEIF QGRLLPLKDSSR    KTTLRDEL+VNEDDD  +  SFPKLTK+    W+
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR

Query:  ERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        E+FGFRRSH   KKQ R+EGVLKTV EE+K+SVFLHEDLINIARKNG
Subjt:  ERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

XP_038877999.1 uncharacterized protein LOC120070205 [Benincasa hispida]4.74e-7680Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR------KTTLRDELKVNEDDDNGDGESFPKLTK-SSAG
        MDPRISFSNDF+ET+Q LK+ENIYREAPVSSDFEF+VK+R MI ADEIFFQG+LLPLKDSSR      KTTLRDEL+VNE+DD  D  SFPK TK SSA 
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR------KTTLRDELKVNEDDDNGDGESFPKLTK-SSAG

Query:  CWRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        CW+E+FGFRRSH  PKKQSR+EGVLKTV EEEKTSVFLHEDLINIARKNG
Subjt:  CWRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

TrEMBL top hitse value%identityAlignment
A0A0A0L727 Uncharacterized protein4.32e-7176.51Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTKSSAG-C
        MDPRISFSNDF+ET+QPLKLENIYREAPVSSDFEF+VKDR MI ADEIFFQG+LLPLKDS R     KTTLRDEL+VNE++D+    SFPK TK S+G C
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTKSSAG-C

Query:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        W+E+FGFR+SH   KKQSR+E VLKTV EE++TSVFLHEDLINIARKNG
Subjt:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

A0A5A7T4Q1 Uncharacterized protein3.50e-7075.84Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTK-SSAGC
        MDPRISFSNDF+ET+QPLKLENIYREAPVSSDFEF+VKDR MI ADEIFFQG+LLPLKDS R     KTTLRDEL+VNE++D+    SFPK TK SS+ C
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-----KTTLRDELKVNEDDDNGDGESFPKLTK-SSAGC

Query:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        W+E+FGFR+ H   KKQSR+E VLKTV EE++TSVFLHEDLINIARKNG
Subjt:  WRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

A0A6J1D6D4 uncharacterized protein LOC1110177347.06e-99100Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG
        MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFG

Query:  FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
Subjt:  FRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

A0A6J1FRB6 uncharacterized protein LOC1114477332.41e-7077.7Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGE-SFPKLTKSSAGCW
        MDPRISFSNDF+ETQ PLKLENIYREAPVSSDFEF+VKDR MI ADEIF QGRLLPLKDSSR    KTTLRDEL+VNEDDD  + + SFPKLTK+    W
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGE-SFPKLTKSSAGCW

Query:  RERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        +E+FGFRRSH   +KQ R+EGVLKTV EE+K+SVFLHEDLINIARKNG
Subjt:  RERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

A0A6J1IYE6 uncharacterized protein LOC1114817673.58e-7278.91Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR
        MDPRISFSNDF+ETQ PLKLENIYREAPVSSDFEF+VKDR MI ADEIF QGRLLPLKDSSR    KTTLRDEL+VNEDDD  +  SFPKLTK+    W+
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR----KTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR

Query:  ERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG
        E+FGFRRSH   KKQ R+EGVLKTV EE+K+SVFLHEDLINIARKNG
Subjt:  ERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79060.1 unknown protein1.9e-0528.17Show/hide
Query:  DPRISFSNDFIETQQPLKLENIYRE--APVSSDFEFTVKDR--SMIPADEIFFQGRLLPLKDSSRKTTL-----RDELKVNEDDDNGDGESFPKLTKSSA
        +PR SFS D            I +E  A  + DFEF +++    M+PADE+F  G+L+  +   + T +     R E+   E    GD  SF       +
Subjt:  DPRISFSNDFIETQQPLKLENIYRE--APVSSDFEFTVKDR--SMIPADEIFFQGRLLPLKDSSRKTTL-----RDELKVNEDDDNGDGESFPKLTKSSA

Query:  GCWRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSV--FLH
          WR+  G +R      K + +     T P    +S+  FLH
Subjt:  GCWRERFGFRRSHIGPKKQSRSEGVLKTVPEEEKTSV--FLH

AT3G19200.1 unknown protein6.9e-1146.43Show/hide
Query:  MDPRISFSNDFIETQQPLKLENI-----YREAPVSSDFEFTVKDRSMI-PADEIFFQGRLLPLKDSSRK--TTLRDELKVNEDD
        +D RISFSNDF ++              Y+EAPVSSDF+F V++      ADEIFF G LLPL+ ++++  TTLRDEL   + D
Subjt:  MDPRISFSNDFIETQQPLKLENI-----YREAPVSSDFEFTVKDRSMI-PADEIFFQGRLLPLKDSSRK--TTLRDELKVNEDD

AT3G50640.1 unknown protein1.2e-1541.94Show/hide
Query:  RISFSNDFIETQQP---LKLENIYREAPV---SSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-KTTLRDELKVNEDDDNGDGESF---PKLTKSSA-
        RISFSN+F+E +      K  NI   +     S+DF F+V D SMIPADEIF +G++LP K++S    TL +EL   E+    DG +F   P L  SS+ 
Subjt:  RISFSNDFIETQQP---LKLENIYREAPV---SSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-KTTLRDELKVNEDDDNGDGESF---PKLTKSSA-

Query:  ---GCWRERFGFRRSHIGPKKQSR
           G WRE  G +R+H+  KK  +
Subjt:  ---GCWRERFGFRRSHIGPKKQSR

AT4G34419.1 unknown protein5.5e-1647.46Show/hide
Query:  DPRISFSNDFIETQQPLKLENIYREAPVSS-DFEFTVKDRSMIPADEIFFQGRLLPLKD----SSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR
        +PRISFS+ F  T+  +     Y+EAPVSS DFEF V++ SM  ADEIFF G +LPLK+    + R +TLR+EL         DG+S    +K S+G WR
Subjt:  DPRISFSNDFIETQQPLKLENIYREAPVSS-DFEFTVKDRSMIPADEIFFQGRLLPLKD----SSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWR

Query:  ERFG--FRRSHIGPKKQS
        ER G  F RS    KK S
Subjt:  ERFG--FRRSHIGPKKQS

AT5G66800.1 unknown protein2.1e-1536.09Show/hide
Query:  MDPRISFSNDFIETQQPLKLENIYREAPV----------SSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-KTTLRDELKVNEDDDNGDGE-------
        M PRISFSNDF+E +   +     R +P+          S +FEF+V + +M+PADE+F +G+LLP K++++ + TLR+EL V ED++ G  +       
Subjt:  MDPRISFSNDFIETQQPLKLENIYREAPV----------SSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSR-KTTLRDELKVNEDDDNGDGE-------

Query:  ------SFPKLTKSSAGCWRERFGFRRSHIGPK
              S    + SS G W+   G +R+H+G K
Subjt:  ------SFPKLTKSSAGCWRERFGFRRSHIGPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAAGAATTTCCTTCTCAAATGACTTTATTGAAACTCAACAGCCATTGAAGCTTGAGAACATCTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCACTGT
GAAGGACAGAAGCATGATTCCTGCAGATGAGATTTTCTTTCAGGGGAGGCTGCTGCCATTGAAGGACAGTTCAAGGAAGACAACTTTGAGGGATGAGCTGAAAGTCAATG
AAGATGATGATAATGGTGATGGTGAAAGTTTTCCTAAGCTAACAAAAAGCTCTGCAGGCTGCTGGAGGGAGAGATTTGGTTTCAGGAGATCCCATATTGGGCCAAAGAAA
CAGAGTAGAAGTGAAGGGGTTCTCAAAACTGTACCAGAGGAAGAGAAAACTAGTGTGTTTCTTCATGAGGACCTCATAAATATTGCAAGGAAAAATGGG
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAAGAATTTCCTTCTCAAATGACTTTATTGAAACTCAACAGCCATTGAAGCTTGAGAACATCTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCACTGT
GAAGGACAGAAGCATGATTCCTGCAGATGAGATTTTCTTTCAGGGGAGGCTGCTGCCATTGAAGGACAGTTCAAGGAAGACAACTTTGAGGGATGAGCTGAAAGTCAATG
AAGATGATGATAATGGTGATGGTGAAAGTTTTCCTAAGCTAACAAAAAGCTCTGCAGGCTGCTGGAGGGAGAGATTTGGTTTCAGGAGATCCCATATTGGGCCAAAGAAA
CAGAGTAGAAGTGAAGGGGTTCTCAAAACTGTACCAGAGGAAGAGAAAACTAGTGTGTTTCTTCATGAGGACCTCATAAATATTGCAAGGAAAAATGGG
Protein sequenceShow/hide protein sequence
MDPRISFSNDFIETQQPLKLENIYREAPVSSDFEFTVKDRSMIPADEIFFQGRLLPLKDSSRKTTLRDELKVNEDDDNGDGESFPKLTKSSAGCWRERFGFRRSHIGPKK
QSRSEGVLKTVPEEEKTSVFLHEDLINIARKNG