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MC10g0558 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0558
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTetratricopeptide-like helical
Genome locationMC10:4640539..4640892
RNA-Seq ExpressionMC10g0558
SyntenyMC10g0558
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044707.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]6.26e-2956.3Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVN--VTSTTTDV-----GFFG----KNGRGDGGHCFWGILCNMSRSIEKKAYDG
        MSVSLEALAMAG+DSNEW +DA+EWER E++  VPPHLLADE+++E    VTST ++      G FG    ++ + DG H   GI  ++S+ IEK+A +G
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVN--VTSTTTDV-----GFFG----KNGRGDGGHCFWGILCNMSRSIEKKAYDG

Query:  LNSERIMVRAILGFLMVMT
        +NS RI+VR ILGFLMVMT
Subjt:  LNSERIMVRAILGFLMVMT

KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]5.18e-4462.7Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVNVTSTTTD-----VGFFGKNGRGDGG----HCFWGILCNMSRSIEKKAYDGLN
        MSVSLEALAMAG+ SNEWA+DAEEWER E+EN VPPHLLADED+++ NVTST ++      GFF    R DGG    HCFWGILC++S+S+EK+A +G++
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVNVTSTTTD-----VGFFGKNGRGDGG----HCFWGILCNMSRSIEKKAYDGLN

Query:  SERIMVRAILGFLMVMTIKIITANRS
        S RI+VR ILGFL+V  +KII+A+ S
Subjt:  SERIMVRAILGFLMVMTIKIITANRS

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]5.18e-4462.7Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVNVTSTTTD-----VGFFGKNGRGDGG----HCFWGILCNMSRSIEKKAYDGLN
        MSVSLEALAMAG+ SNEWA+DAEEWER E+EN VPPHLLADED+++ NVTST ++      GFF    R DGG    HCFWGILC++S+S+EK+A +G++
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVNVTSTTTD-----VGFFGKNGRGDGG----HCFWGILCNMSRSIEKKAYDGLN

Query:  SERIMVRAILGFLMVMTIKIITANRS
        S RI+VR ILGFL+V  +KII+A+ S
Subjt:  SERIMVRAILGFLMVMTIKIITANRS

TYK16880.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]4.98e-3256.59Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVN--VTSTTTDV-----GFFG----KNGRGDGGHCFWGILCNMSRSIEKKAYDG
        MSVSLEALAMAG+DSNEW +DA+EWER E++  VPPHLLADE+++E    VTST ++      G FG    ++ + DG     GI  ++S+ IEK+A +G
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVN--VTSTTTDV-----GFFG----KNGRGDGGHCFWGILCNMSRSIEKKAYDG

Query:  LNSERIMVRAILGFLMVMTIKIITANRSK
        +NS RI+VR ILGFLMVMT+KII+A RSK
Subjt:  LNSERIMVRAILGFLMVMTIKIITANRSK

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]7.02e-2852.5Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVNVTST--TTDVGFFGKNGRGDGGHCFWGILCNMSRSIEKKAYDGLNSERIMVR
        MSVSLEALAMAG+DSNEWA+DAEEWER EME  +PPHLLADED+EE  +++    T      K+    G  C   I+ ++ +  EK+  + L+S  I+  
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVNVTST--TTDVGFFGKNGRGDGGHCFWGILCNMSRSIEKKAYDGLNSERIMVR

Query:  AILGFLMVMTIKIITANRSK
        A++GFLM MTIKII + RSK
Subjt:  AILGFLMVMTIKIITANRSK

TrEMBL top hitse value%identityAlignment
A0A0A0KU90 Uncharacterized protein5.56e-1370.59Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWER--YEMENH--VPPHLLADEDEEEV
        M VSLEALAMAG+DSNEWA+DAEEW+   ++MEN   +PPHLLADEDEE +
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWER--YEMENH--VPPHLLADEDEEEV

A0A0A0KWE7 Uncharacterized protein5.02e-3557.89Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEE---VNVTSTT-------TDVGFFGKNGR-----GDGGHCFWGILCNMSRSIEKK
        MSVSLEALAMAG+DSNEWA+DAEEWER E++  VPPHLLADE+++E    +VT++T        D  F G  GR     G  GH   GI C++S+ IEK+
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEE---VNVTSTT-------TDVGFFGKNGR-----GDGGHCFWGILCNMSRSIEKK

Query:  AYDGLNSERIMVRAILGFLMVMTIKIITANRSK
        A +G++S RI+VR ILGFLMVMT+KII+A RSK
Subjt:  AYDGLNSERIMVRAILGFLMVMTIKIITANRSK

A0A5A7TS68 Tetratricopeptide-like helical3.03e-2956.3Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVN--VTSTTTDV-----GFFG----KNGRGDGGHCFWGILCNMSRSIEKKAYDG
        MSVSLEALAMAG+DSNEW +DA+EWER E++  VPPHLLADE+++E    VTST ++      G FG    ++ + DG H   GI  ++S+ IEK+A +G
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVN--VTSTTTDV-----GFFG----KNGRGDGGHCFWGILCNMSRSIEKKAYDG

Query:  LNSERIMVRAILGFLMVMT
        +NS RI+VR ILGFLMVMT
Subjt:  LNSERIMVRAILGFLMVMT

A0A5D3CZU0 Tetratricopeptide-like helical2.41e-3256.59Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVN--VTSTTTDV-----GFFG----KNGRGDGGHCFWGILCNMSRSIEKKAYDG
        MSVSLEALAMAG+DSNEW +DA+EWER E++  VPPHLLADE+++E    VTST ++      G FG    ++ + DG     GI  ++S+ IEK+A +G
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVN--VTSTTTDV-----GFFG----KNGRGDGGHCFWGILCNMSRSIEKKAYDG

Query:  LNSERIMVRAILGFLMVMTIKIITANRSK
        +NS RI+VR ILGFLMVMT+KII+A RSK
Subjt:  LNSERIMVRAILGFLMVMTIKIITANRSK

A0A6J1FX98 uncharacterized protein LOC1114478803.40e-2852.5Show/hide
Query:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVNVTST--TTDVGFFGKNGRGDGGHCFWGILCNMSRSIEKKAYDGLNSERIMVR
        MSVSLEALAMAG+DSNEWA+DAEEWER EME  +PPHLLADED+EE  +++    T      K+    G  C   I+ ++ +  EK+  + L+S  I+  
Subjt:  MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVNVTST--TTDVGFFGKNGRGDGGHCFWGILCNMSRSIEKKAYDGLNSERIMVR

Query:  AILGFLMVMTIKIITANRSK
        A++GFLM MTIKII + RSK
Subjt:  AILGFLMVMTIKIITANRSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22320.1 unknown protein3.6e-0557.14Show/hide
Query:  LEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEE
        +EALAMAG+D  EW +  EEWE    E+ VP HLLAD+ +EE
Subjt:  LEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTTCTTTAGAAGCTTTGGCAATGGCGGGGATGGATTCCAATGAGTGGGCTGTGGATGCTGAGGAATGGGAAAGATATGAAATGGAGAACCATGTTCCGCCTCA
TTTATTGGCAGACGAGGACGAGGAGGAAGTAAACGTGACAAGTACGACGACCGACGTCGGATTCTTTGGGAAAAATGGCAGAGGTGACGGAGGCCATTGCTTTTGGGGCA
TTCTCTGTAATATGAGCAGAAGCATAGAGAAGAAGGCTTATGATGGGCTGAACTCAGAGAGAATAATGGTTAGAGCTATTTTAGGGTTTCTGATGGTGATGACAATCAAG
ATAATAACTGCGAACAGATCCAAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTTTCTTTAGAAGCTTTGGCAATGGCGGGGATGGATTCCAATGAGTGGGCTGTGGATGCTGAGGAATGGGAAAGATATGAAATGGAGAACCATGTTCCGCCTCA
TTTATTGGCAGACGAGGACGAGGAGGAAGTAAACGTGACAAGTACGACGACCGACGTCGGATTCTTTGGGAAAAATGGCAGAGGTGACGGAGGCCATTGCTTTTGGGGCA
TTCTCTGTAATATGAGCAGAAGCATAGAGAAGAAGGCTTATGATGGGCTGAACTCAGAGAGAATAATGGTTAGAGCTATTTTAGGGTTTCTGATGGTGATGACAATCAAG
ATAATAACTGCGAACAGATCCAAG
Protein sequenceShow/hide protein sequence
MSVSLEALAMAGMDSNEWAVDAEEWERYEMENHVPPHLLADEDEEEVNVTSTTTDVGFFGKNGRGDGGHCFWGILCNMSRSIEKKAYDGLNSERIMVRAILGFLMVMTIK
IITANRSK