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MC10g0559 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0559
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTetratricopeptide-like helical
Genome locationMC10:4642764..4643156
RNA-Seq ExpressionMC10g0559
SyntenyMC10g0559
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]1.96e-3555.73Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+ S+ WAMDAEEWERNE EN V PPHLLADED+D D     +TST  N  FP  G F S RR+D GA  ++CF  I+C    KS+EKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        N + S+  +V  I+GFL+V   KII++  S 
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

KAG6600647.1 hypothetical protein SDJN03_05880, partial [Cucurbita argyrosperma subsp. sororia]1.05e-3058.78Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+  AMDAEEWERNE E + IPPHLLADED     +E D  ST    KFPA     S  RKD+G GGV C P IM  + RK  EKR  
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        N L SM  +  A+VGFLM MT KII S+ SK
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]7.94e-3554.96Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+ S+ WAMDAEEWERNE EN V PPHLLADED+D D     +TST  N  FP  G F S  R+D GA  ++CF  I+C    KS+EKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        N + S+  +V  I+GFL+V   KII++  S 
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

TYK16880.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]7.60e-3053.44Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ W MDA+EWERNE +  V+PPHLLADE++D+D +   +TST  N  F   G FG  RR+D  A G      I      K IEKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        N + S+  +V  I+GFLMVMT KII++Q SK
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]6.81e-3461.07Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ WAMDAEEWERNE E   IPPHLLADED     DE D  ST    KFPA     S  RKDDG GGV C P IM  + RK  EKR  
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        N L SM  +  A+VGFLM MT KII S+ SK
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

TrEMBL top hitse value%identityAlignment
A0A0A0KU90 Uncharacterized protein4.63e-1550Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERN--ETENH-VIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEK
        VSLEALAMAG+DS+ WAMDAEEW+ N  + EN  +IPPHLLADEDE+                  A  L  SG RKDDG   V+C         RK +EK
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERN--ETENH-VIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEK

Query:  RA
        RA
Subjt:  RA

A0A0A0KWE7 Uncharacterized protein5.43e-3355.97Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKD---DGAGGVYCFPAIMCQYFRKSIEK
        VSLEALAMAG+DS+ WAMDAEEWERNE +  V+PPHLLADE++D+D DE   TST  N  FP  G F   R +D   DG  G +    I C    K IEK
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKD---DGAGGVYCFPAIMCQYFRKSIEK

Query:  RAWNFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        RA N + S+  +V  I+GFLMVMT KII++Q SK
Subjt:  RAWNFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

A0A5A7TS68 Tetratricopeptide-like helical6.49e-2752.03Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ W MDA+EWERNE +  V+PPHLLADE++D+D +   +TST  N  F   G FG  RR+D  A G +    I      K IEKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTK
        N + S+  +V  I+GFLMVMT +
Subjt:  NFLRSMGTMVGAIVGFLMVMTTK

A0A5D3CZU0 Tetratricopeptide-like helical3.68e-3053.44Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ W MDA+EWERNE +  V+PPHLLADE++D+D +   +TST  N  F   G FG  RR+D  A G      I      K IEKRA 
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        N + S+  +V  I+GFLMVMT KII++Q SK
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

A0A6J1FX98 uncharacterized protein LOC1114478803.30e-3461.07Show/hide
Query:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW
        VSLEALAMAG+DS+ WAMDAEEWERNE E   IPPHLLADED     DE D  ST    KFPA     S  RKDDG GGV C P IM  + RK  EKR  
Subjt:  VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAW

Query:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK
        N L SM  +  A+VGFLM MT KII S+ SK
Subjt:  NFLRSMGTMVGAIVGFLMVMTTKIITSQGSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22320.1 unknown protein1.4e-0547.06Show/hide
Query:  LEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADE--DEDKDKDERD
        +EALAMAG+D   W +  EEWE  E+   V+P HLLAD+  +E++++D +D
Subjt:  LEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADE--DEDKDKDERD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTCTTTAGAAGCTTTGGCCATGGCGGGGATGGATTCTGATTTGTGGGCTATGGATGCTGAAGAATGGGAAAGAAATGAGACCGAGAATCATGTCATTCCGCCGCATTT
GTTAGCGGACGAGGATGAGGACAAGGACAAAGATGAGAGAGACATGACGAGTACGACGGGTAACTGTAAGTTTCCGGCCGTTGGATTATTCGGCAGCGGGCGGAGGAAAG
ATGACGGTGCTGGTGGTGTGTACTGCTTTCCGGCGATTATGTGCCAATATTTCAGAAAAAGCATAGAGAAGAGAGCGTGGAATTTTCTGAGGTCAATGGGAACAATGGTG
GGAGCTATTGTAGGGTTTCTTATGGTGATGACTACGAAGATAATAACTTCACAAGGATCCAAG
mRNA sequenceShow/hide mRNA sequence
GTTTCTTTAGAAGCTTTGGCCATGGCGGGGATGGATTCTGATTTGTGGGCTATGGATGCTGAAGAATGGGAAAGAAATGAGACCGAGAATCATGTCATTCCGCCGCATTT
GTTAGCGGACGAGGATGAGGACAAGGACAAAGATGAGAGAGACATGACGAGTACGACGGGTAACTGTAAGTTTCCGGCCGTTGGATTATTCGGCAGCGGGCGGAGGAAAG
ATGACGGTGCTGGTGGTGTGTACTGCTTTCCGGCGATTATGTGCCAATATTTCAGAAAAAGCATAGAGAAGAGAGCGTGGAATTTTCTGAGGTCAATGGGAACAATGGTG
GGAGCTATTGTAGGGTTTCTTATGGTGATGACTACGAAGATAATAACTTCACAAGGATCCAAG
Protein sequenceShow/hide protein sequence
VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLADEDEDKDKDERDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMV
GAIVGFLMVMTTKIITSQGSK