; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g0564 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0564
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionpolyadenylate-binding protein 2-like
Genome locationMC10:4665517..4669167
RNA-Seq ExpressionMC10g0564
SyntenyMC10g0564
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53209.1 hypothetical protein Csa_014786 [Cucumis sativus]2.13e-14197.17Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRPMRYMPYY

XP_004146877.1 polyadenylate-binding protein 2 [Cucumis sativus]9.68e-14297.17Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRPMRYMPYY

XP_022136947.1 polyadenylate-binding protein 2-like isoform X1 [Momordica charantia]1.82e-146100Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

XP_022929268.1 polyadenylate-binding protein 2-like [Cucurbita moschata]1.95e-14196.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS SQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRPMRYMPYY

XP_038884177.1 polyadenylate-binding protein 2 isoform X1 [Benincasa hispida]1.67e-14297.64Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSA QAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRPMRYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KWF2 RRM domain-containing protein1.03e-14197.17Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRPMRYMPYY

A0A5D3D298 Polyadenylate-binding protein 2 isoform X14.20e-14196.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSA QAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRPMRYMPYY

A0A6J1C6V0 polyadenylate-binding protein 2-like isoform X18.79e-147100Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

A0A6J1EN98 polyadenylate-binding protein 2-like9.45e-14296.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS SQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRPMRYMPYY

A0A6J1JCD2 polyadenylate-binding protein 2-like9.45e-14296.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS SQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMP

Query:  RFRRPMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRPMRYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 23.8e-3459.31Show/hide
Query:  DDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF
        D   KEL EMK+R+ EME EAA LR MQ +++ E         T A +  KE  D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF G PKGF
Subjt:  DDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF

Query:  AYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPR
        AY+EF E   V  ALLLN S LH R LKV PKRTNVPGM + R R
Subjt:  AYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPR

Q93VI4 Polyadenylate-binding protein 11.0e-7167.4Show/hide
Query:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSR
        +E+EHEVYGGEIP   EGEMD        G+   +AGD++     + ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G   S A KEE DSR
Subjt:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQY--RPRRYNPYMGFRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQY--RPRRYNPYMGFRRP

Query:  YVPPYFYSPYGYGKMPRFRRPMRYMPY
         VP  FY PY YG++PRFRRPMRY PY
Subjt:  YVPPYFYSPYGYGKMPRFRRPMRYMPY

Q9DDY9 Polyadenylate-binding protein 2-A1.5e-3043.36Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS---ASQAGKEETDSRSVFVGNVDYAC
        +EE E E    E P  GE+ GD  +         EL+ +K R++EMEEEA  L+E+Q +VEK+M     P        S   K E D+RS++VGNVDY  
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS---ASQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMK---------QYRPR--RYNPYMGFRRPY
        T EE++ HF  CG+VNRVTIL DKF G PKGFAY+EF + E+V+ +L L+ES   GRQ+KV+PKRTN PG+          +YR R   Y+    F   Y
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMK---------QYRPR--RYNPYMGFRRPY

Query:  VPPYFYSPYGYGKMPRFRRPMRYMPY
         P     P G     R R    Y PY
Subjt:  VPPYFYSPYGYGKMPRFRRPMRYMPY

Q9FJN9 Polyadenylate-binding protein 25.5e-9483.18Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNV
        MEEEEHEVYGGEIP  GEMDG       D+DM+A DDDAVKELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  +A+QAGKEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIPVEGEMDG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKVL KRTNVPG+KQ+R RR+NPYMG  FRRP++ PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFY

Query:  SPYGYGKMPRFRRPMRYMPY
        SPYGYGK PRFRRPMRYMPY
Subjt:  SPYGYGKMPRFRRPMRYMPY

Q9LX90 Polyadenylate-binding protein 33.0e-9282.41Show/hide
Query:  MEEEEHEVYGGEIPVEGEM---DGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP  G+    D D+DMSA D+DAV EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  +A+Q GKEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIPVEGEM---DGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQY P R+NP MG  FRRP+VPPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFYSPYG

Query:  YGKMPRFRRPMRYMPY
        YGK PRFRRPMRYMPY
Subjt:  YGKMPRFRRPMRYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-9382.41Show/hide
Query:  MEEEEHEVYGGEIPVEGEM---DGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP  G+    D D+DMSA D+DAV EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  +A+Q GKEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIPVEGEM---DGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQY P R+NP MG  FRRP+VPPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFYSPYG

Query:  YGKMPRFRRPMRYMPY
        YGK PRFRRPMRYMPY
Subjt:  YGKMPRFRRPMRYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-8581.68Show/hide
Query:  MEEEEHEVYGGEIPVEGEM---DGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP  G+    D D+DMSA D+DAV EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  +A+Q GKEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIPVEGEM---DGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQY P R+NP MG  FRRP+VPPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFYSPYG

Query:  YG
        YG
Subjt:  YG

AT5G51120.1 polyadenylate-binding protein 17.2e-7367.4Show/hide
Query:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSR
        +E+EHEVYGGEIP   EGEMD        G+   +AGD++     + ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G   S A KEE DSR
Subjt:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQY--RPRRYNPYMGFRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQY--RPRRYNPYMGFRRP

Query:  YVPPYFYSPYGYGKMPRFRRPMRYMPY
         VP  FY PY YG++PRFRRPMRY PY
Subjt:  YVPPYFYSPYGYGKMPRFRRPMRYMPY

AT5G51120.2 polyadenylate-binding protein 12.9e-6656.82Show/hide
Query:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------
        +E+EHEVYGGEIP   EGEMD        G+   +AGD++     + ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------

Query:  -------------------DPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESE
                           +   +  S A KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESE
Subjt:  -------------------DPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESE

Query:  LHGRQLKVLPKRTNVPGMKQY--RPRRYNPYMGFRRPYVPPYFYSPYGYGKMPRFRRPMRYMPY
        LHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P VP  FY PY YG++PRFRRPMRY PY
Subjt:  LHGRQLKVLPKRTNVPGMKQY--RPRRYNPYMGFRRPYVPPYFYSPYGYGKMPRFRRPMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-9583.18Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNV
        MEEEEHEVYGGEIP  GEMDG       D+DM+A DDDAVKELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  +A+QAGKEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIPVEGEMDG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKVL KRTNVPG+KQ+R RR+NPYMG  FRRP++ PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMG--FRRPYVPPYFY

Query:  SPYGYGKMPRFRRPMRYMPY
        SPYGYGK PRFRRPMRYMPY
Subjt:  SPYGYGKMPRFRRPMRYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAAGAGCACGAGGTGTACGGTGGAGAGATTCCAGTCGAGGGGGAGATGGACGGTGACGTTGACATGTCCGCCGGCGACGACGACGCTGTTAAGGAGCTAGA
CGAGATGAAAAAGCGCTTGAAGGAGATGGAGGAGGAAGCAGCGGCTCTCCGAGAAATGCAAGCCAAGGTTGAAAAGGAAATGGGAGCCGTCCAAGATCCTGCTGGTACAT
CTGCTAGTCAAGCTGGCAAGGAGGAGACTGATTCGCGATCAGTATTTGTTGGCAATGTTGACTATGCATGCACGCCCGAAGAAGTGCAACAGCATTTCCAATCCTGTGGT
ACTGTCAACAGAGTGACTATTTTAACAGATAAATTTGGCCAACCTAAGGGCTTTGCCTATGTAGAATTTCTTGAAGCTGAAGCTGTTCAAGAGGCCCTCCTTCTGAATGA
ATCTGAACTACATGGACGCCAACTGAAGGTTTTACCCAAGAGGACAAATGTTCCTGGTATGAAGCAATATCGTCCCCGGCGTTATAACCCGTACATGGGATTTAGGAGGC
CTTATGTACCACCATATTTCTATTCACCTTACGGCTATGGGAAGATGCCCCGGTTTCGAAGGCCGATGCGATACATGCCCTACTATTAG
mRNA sequenceShow/hide mRNA sequence
TGGAGTCATTTTTATGGGCCTTACGACTTCGATTCGCTGCAGTTCCACGCATCAAACGAGGAGATTTCCAGAAACGAAAGCGGAATTGCGAGCGAAAGATAGATGGAGGA
AGAAGAGCACGAGGTGTACGGTGGAGAGATTCCAGTCGAGGGGGAGATGGACGGTGACGTTGACATGTCCGCCGGCGACGACGACGCTGTTAAGGAGCTAGACGAGATGA
AAAAGCGCTTGAAGGAGATGGAGGAGGAAGCAGCGGCTCTCCGAGAAATGCAAGCCAAGGTTGAAAAGGAAATGGGAGCCGTCCAAGATCCTGCTGGTACATCTGCTAGT
CAAGCTGGCAAGGAGGAGACTGATTCGCGATCAGTATTTGTTGGCAATGTTGACTATGCATGCACGCCCGAAGAAGTGCAACAGCATTTCCAATCCTGTGGTACTGTCAA
CAGAGTGACTATTTTAACAGATAAATTTGGCCAACCTAAGGGCTTTGCCTATGTAGAATTTCTTGAAGCTGAAGCTGTTCAAGAGGCCCTCCTTCTGAATGAATCTGAAC
TACATGGACGCCAACTGAAGGTTTTACCCAAGAGGACAAATGTTCCTGGTATGAAGCAATATCGTCCCCGGCGTTATAACCCGTACATGGGATTTAGGAGGCCTTATGTA
CCACCATATTTCTATTCACCTTACGGCTATGGGAAGATGCCCCGGTTTCGAAGGCCGATGCGATACATGCCCTACTATTAGATATTAAGATTGTCCAGGTTTGATAAGTT
TGTTCTGAAAGAGTTGATACTTGCTTCTGATCCTTGAGAGTACAGAAAGGATACAAGTCTATCTTCACAACATTTGTTATTTCTTTTACTATCTTGGATACTTACAATAA
TCAAATCATTTGATATTTGAATAATATTTTTGCTCTATGACCTGTTGAATCTATTCAATGAATACTTTTGAGAGTAGTGTTTTTAAATACTTATATAAAGAAAAAACAAA
CCCATTGTCTA
Protein sequenceShow/hide protein sequence
MEEEEHEVYGGEIPVEGEMDGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCG
TVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYMGFRRPYVPPYFYSPYGYGKMPRFRRPMRYMPYY