| GenBank top hits | e value | %identity | Alignment |
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| KAG6600626.1 DNA-directed RNA polymerases II, IV and V subunit 8B, partial [Cucurbita argyrosperma subsp. sororia] | 2.62e-91 | 89.66 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M ELLFDDIFKVKCVNPDG+KYDKVSRI+ARSEKL+M+MLLDVNTEIYPIDEG+KILMVLSPTLNYDGAPV +S Q+GKKSLADKFEY+MHGKLYKL++
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMMLKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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| XP_022136431.1 DNA-directed RNA polymerases II and V subunit 8A-like [Momordica charantia] | 6.46e-101 | 100 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKLP
EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKLP
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKLP
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| XP_022929200.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita moschata] | 4.38e-92 | 89.66 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M ELLF+D+FKVKCVNPDG+KYDKVSRI+ARSEKL+M+MLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPV S+S QEGKKSLADKFEY+MHGK+YKLS+
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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| XP_022942165.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita moschata] | 1.07e-90 | 89.66 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M ELLFDDIFKVKCVNPDG+KYDKVSRI+ARSEKL+M+MLLDVNTEIYPIDEG+KILMVLSPTLNYDGAPV S+S QEGKKSLADKFEY+MH KLYKL++
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMMLKGDP+HC KFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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| XP_022983196.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita maxima] | 4.53e-92 | 90.34 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M E+LFDDIFKVKCVNPDG+KYDKVSRI+ARSEKL+M+MLLDVNTEIYPIDEG+KILMVLSPTLNYDGAPV S+S QEGKKSLADKFEY+MHGKLYKL++
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMMLKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1C3H4 DNA-directed RNA polymerases II and V subunit 8A-like | 3.13e-101 | 100 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKLP
EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKLP
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKLP
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| A0A6J1ETP8 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 2.12e-92 | 89.66 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M ELLF+D+FKVKCVNPDG+KYDKVSRI+ARSEKL+M+MLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPV S+S QEGKKSLADKFEY+MHGK+YKLS+
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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| A0A6J1FVR2 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 5.17e-91 | 89.66 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M ELLFDDIFKVKCVNPDG+KYDKVSRI+ARSEKL+M+MLLDVNTEIYPIDEG+KILMVLSPTLNYDGAPV S+S QEGKKSLADKFEY+MH KLYKL++
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMMLKGDP+HC KFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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| A0A6J1J454 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 2.12e-92 | 89.66 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M ELLF+D+FKVKCVNPDG+KYDKVSRI+ARSEKL+M+MLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPV S+S QEGKKSLADKFEY+MHGK+YKLS+
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQM+LKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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| A0A6J1J6Q9 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 2.19e-92 | 90.34 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M E+LFDDIFKVKCVNPDG+KYDKVSRI+ARSEKL+M+MLLDVNTEIYPIDEG+KILMVLSPTLNYDGAPV S+S QEGKKSLADKFEY+MHGKLYKL++
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMMLKGDP+HCAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XT81 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 3.3e-29 | 40.69 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M ++FDD+F VK V+PDG+K+D+VSR +E M +++D+N++IYP+ + +K +VL+ TL DG + + ++EYVM+GK+Y+L +
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSD-LKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRK
+ SG+D ++ YASFGGL M LKG+ ++ F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRK
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| O81097 DNA-directed RNA polymerases II and V subunit 8A | 6.4e-41 | 55.63 | Show/hide |
Query: LLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSEEGS
+LF+DIF V ++PDG+K+DKV+R+ A S L M M LDVNTE+YP+ G+K + L+PTLN DG P + + KK+LADK+EY+MHGKLYK+SE
Subjt: LLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSEEGS
Query: GSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
G K E+Y SFGGL M+LKGDP H + F +DQ +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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| Q19826 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 3.0e-30 | 41.38 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M ++FDD+FKVK V+PDG+K+D+VSR +E M +++D+N++IYP+ + +K+ +VL+ TL DG + + ++EYVM+GK+Y+L +
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSD-LKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRK
+ +G+D K+ YASFGGL M LKG+ ++ F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRK
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| Q54YW8 DNA-directed RNA polymerases I, II, and III subunit rpabc3 | 4.3e-29 | 45.14 | Show/hide |
Query: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
M +LF+D F+VK ++PDG+K+D+VSR SE M + +D+ T IYP+ E+ MVL+ +LN DG+ S S K SLADK++YVM+GK++K +
Subjt: MVELLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSE
Query: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRK
E S S KV V+ASFGGL ++L+GDP + +D ++LL++K
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRK
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| Q9M1A8 DNA-directed RNA polymerases II, IV and V subunit 8B | 6.4e-41 | 54.23 | Show/hide |
Query: LLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSEEGS
++F+DIF V ++PDG+K+DKV+R++ARS L M M LDVNTE+YP+ G+K + ++PTLN DG P + + KK+LADK+EY+MHGKLYK+SE
Subjt: LLFDDIFKVKCVNPDGQKYDKVSRIDARSEKLAMHMLLDVNTEIYPIDEGEKILMVLSPTLNYDGAPVASHSSQEGKKSLADKFEYVMHGKLYKLSEEGS
Query: GSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
G K E+Y SFGGL M+L+GDP H + F +DQ +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMMLKGDPVHCAKFRVDQNMFLLLRKL
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