; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g0689 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0689
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionBEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Genome locationMC10:5750130..5753905
RNA-Seq ExpressionMC10g0689
SyntenyMC10g0689
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019314 - BLOC-1-related complex subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136587.1 uncharacterized protein LOC111008257 isoform X1 [Momordica charantia]1.02e-83100Show/hide
Query:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
        MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
Subjt:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ

Query:  ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQL
        ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQL
Subjt:  ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQL
XP_022136588.1 uncharacterized protein LOC111008257 isoform X2 [Momordica charantia]1.49e-99100Show/hide
Query:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
        MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
Subjt:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ

Query:  ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
        ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
Subjt:  ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
XP_022136589.1 uncharacterized protein LOC111008257 isoform X3 [Momordica charantia]3.72e-73100Show/hide
Query:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
        MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
Subjt:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ

Query:  ESVLDAATKGNRYINSSLR
        ESVLDAATKGNRYINSSLR
Subjt:  ESVLDAATKGNRYINSSLR
XP_022931514.1 uncharacterized protein LOC111437668 [Cucurbita moschata]7.47e-7377.07Show/hide
Query:  MDQARADFSTKIDS--QIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGC
        M+Q+ +D S+ I++  QIP TSPNS + E PTCSVLED T+ +  L  TEIFKAI+VVEKDSLAIAESFTSLFASLRS LSE + NSIDHMHCF+DAAG 
Subjt:  MDQARADFSTKIDS--QIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGC

Query:  LQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
        LQESVLDAATKGNRYINSSLRLNQEMKG+DNLAAQLK+LRKNVD LD AVNKLL+FP
Subjt:  LQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
XP_023553161.1 uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo]3.70e-7377.71Show/hide
Query:  MDQARADFSTKIDS--QIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGC
        M+Q+ +D ST I+   QIP TSPNS + E PTCSVLED T+ +  L  TEIFKAI+VVEKDSLAIAESFTSLFASLRS LSE + NSIDHMHCF+DAAG 
Subjt:  MDQARADFSTKIDS--QIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGC

Query:  LQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
        LQESVLDAATKGNRYINSSLRLNQEMKG+DNLAAQLK+LRKNVD LD AVNKLL+FP
Subjt:  LQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
TrEMBL top hitse value%identityAlignment
A0A6J1C4R3 uncharacterized protein LOC111008257 isoform X31.80e-73100Show/hide
Query:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
        MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
Subjt:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ

Query:  ESVLDAATKGNRYINSSLR
        ESVLDAATKGNRYINSSLR
Subjt:  ESVLDAATKGNRYINSSLR
A0A6J1C5W4 uncharacterized protein LOC111008257 isoform X14.92e-84100Show/hide
Query:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
        MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
Subjt:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ

Query:  ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQL
        ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQL
Subjt:  ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQL
A0A6J1C7Z8 uncharacterized protein LOC111008257 isoform X27.20e-100100Show/hide
Query:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
        MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ
Subjt:  MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQ

Query:  ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
        ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
Subjt:  ESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
A0A6J1EUG1 uncharacterized protein LOC1114376683.62e-7377.07Show/hide
Query:  MDQARADFSTKIDS--QIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGC
        M+Q+ +D S+ I++  QIP TSPNS + E PTCSVLED T+ +  L  TEIFKAI+VVEKDSLAIAESFTSLFASLRS LSE + NSIDHMHCF+DAAG 
Subjt:  MDQARADFSTKIDS--QIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGC

Query:  LQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
        LQESVLDAATKGNRYINSSLRLNQEMKG+DNLAAQLK+LRKNVD LD AVNKLL+FP
Subjt:  LQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
A0A6J1J2E9 uncharacterized protein LOC1114827987.29e-7377.07Show/hide
Query:  MDQARADFSTKID--SQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGC
        M+Q+ +D S+ I+  SQIP TSPNS + E PTCSVLED T+ +  L  TEIFKAI+VVEK+SLAIAESFTSLFASLRS LSE + NSIDHMHCF+DAAG 
Subjt:  MDQARADFSTKID--SQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGC

Query:  LQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
        LQESVLDAATKGNRYINSSLRLNQEMKG+DNLAAQLK+LRKNVD LD AVNKLL+FP
Subjt:  LQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23330.1 BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1)1.7e-2369.88Show/hide
Query:  KSKP-PLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL
        +S+P  L Q EI K +  VEKDS AIAESF+SLF SLRS LSEA+G+S+DHM CF +AAG LQE+ LDAATKGNRYINS LRL
Subjt:  KSKP-PLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL
AT4G23330.2 unknown protein9.4e-3870.34Show/hide
Query:  KSKP-PLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVL
        +S+P  L Q EI K +  VEKDS AIAESF+SLF SLRS LSEA+G+S+DHM CF +AAG LQE+ LDAATKGNRYINS LRLN+E+KG++NLAA+LK L
Subjt:  KSKP-PLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVL

Query:  RKNVDALDSAVNKLLDFP
        RKNVD LD+AVNKLL  P
Subjt:  RKNVDALDSAVNKLLDFP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAAGCTCGGGCGGATTTTTCCACAAAGATAGACAGTCAGATTCCGGGGACATCCCCAAATTCAACTGTTTCCGAGATGCCCACTTGTTCCGTTCTTGAAGATTC
CACCAAATCGAAACCTCCGTTGAGACAGACCGAGATTTTCAAAGCCATTGAAGTCGTCGAGAAAGACTCTCTCGCCATAGCTGAGAGCTTCACCTCTCTCTTTGCTTCCC
TCCGTTCGGCTCTCTCCGAGGCCTCCGGCAACTCTATTGATCATATGCATTGCTTCAGTGACGCTGCAGGCTGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGT
AATCGGTACATTAATTCTTCATTGAGATTGAATCAGGAAATGAAAGGCATTGACAATCTAGCTGCTCAGCTCAAAGTTCTGAGGAAGAACGTCGACGCTCTAGACTCGGC
CGTGAACAAGCTCCTTGATTTTCCATGA
mRNA sequenceShow/hide mRNA sequence
GAAACAAATAATTTGGATTGGAAGTTCTACCATTAAAGTATCAGCAAACTTAATTCGTAAATGGGGCTAAAGCTTGTGAGTTGAATTTTCACTTCGAATATTGGGGCTAA
GAGAAAAAGAAAGGAGTAATTGAGAAATGAAACACCACCATTCGCTGGTGAAGGCATTTTTCCAAAGTAAAAAACTCGTCTTTTTCTCGTGTTGTGGTCTTGGGGAGACT
TGCTTGTCGCTCGTCCAGGAATCTAGAGCCCCTCCATCACCCACTTCTAAGAATTCGCGAAAGTGGGCTTTCGTGGGTGTGCTCCATTTCAATGGCCTGATGGGGAATCG
AAACCCAGATTTCGAGCTGCAGAGAATTCGAAAACAATCAGTGTTACACTAGGTTCAAAACATCGGGAAATGGACCAAGCTCGGGCGGATTTTTCCACAAAGATAGACAG
TCAGATTCCGGGGACATCCCCAAATTCAACTGTTTCCGAGATGCCCACTTGTTCCGTTCTTGAAGATTCCACCAAATCGAAACCTCCGTTGAGACAGACCGAGATTTTCA
AAGCCATTGAAGTCGTCGAGAAAGACTCTCTCGCCATAGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTCCGTTCGGCTCTCTCCGAGGCCTCCGGCAACTCTATTGAT
CATATGCATTGCTTCAGTGACGCTGCAGGCTGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGTAATCGGTACATTAATTCTTCATTGAGATTGAATCAGGAAAT
GAAAGGCATTGACAATCTAGCTGCTCAGCTCAAAGTTCTGAGGAAGAACGTCGACGCTCTAGACTCGGCCGTGAACAAGCTCCTTGATTTTCCATGAGCTCGGCACGGTG
GTTGTTGATGTTTCAAGGTCAAGAATTATTGTTTCATTAGATTGTGAGAATGCAGTTCACTCCGTAGTTTCCTTCACATTACATGTTGAGCTCTTTGATGTATTTAGCTA
GTTATAGGGGTGAATAAATCTTCTTTATCGTTGAATAGTGTAACTGTGTTCTCAATAATTAATGTCACTTTTCTTCAAGAAGGTTTAGGGTTGCCCTCTTAATGGAGATT
AAGTTAATAATTTGCAACGAAAAATAGCTTGATGGGTATAGCTCCATCCAATTAAAAGTCAACTGTTTAGGCAAGTCCTTCTTTTGTCAAAATACCAAAAAAAAAAAAGA
GAAAAAAAAAAGAGAGAGTAAATTATTTGTGATTTACAATTTAGGCAGGCAGAGGCAACACTATTTTCTATAAGCACCAAAACTTGAGGATTCAATTTTTTCAAAAGCAA
GCATAAATAGTTTTAAAATATTCATTCATCTCTTCCAACCACGTGAGATTCAT
Protein sequenceShow/hide protein sequence
MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKG
NRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP