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MC10g0695 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0695
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionnuclear transcription factor Y subunit C-1-like
Genome locationMC10:5788331..5788669
RNA-Seq ExpressionMC10g0695
SyntenyMC10g0695
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146566.1 nuclear transcription factor Y subunit C-3 [Cucumis sativus]7.49e-6382.91Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGV+YWKTGPHSLPLARIKKIMKKSGE+VKMISGEAPIVFSKACELFIEELT+RSWM+AMQSKKRMLHKEDVASAILATD+FDFLIGLIF+E+
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  A-----GEIADETTVSM
        A     G++ +  T+S+
Subjt:  A-----GEIADETTVSM

XP_022136847.1 nuclear transcription factor Y subunit C-1-like [Momordica charantia]3.11e-74100Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  AGEIADETTVSMP
        AGEIADETTVSMP
Subjt:  AGEIADETTVSMP

XP_022931515.1 nuclear transcription factor Y subunit C-4-like [Cucurbita moschata]1.07e-6280.99Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGEDVKMIS EAPIVFSKACELF+EELT+RSWM+AMQSKKRMLHKEDVASAILATD+FDFLIGLIFHE+
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  --------AGEIADETTVSMP
                A E+ +  T+S+P
Subjt:  --------AGEIADETTVSMP

XP_023552994.1 nuclear transcription factor Y subunit C-4-like [Cucurbita pepo subsp. pepo]3.09e-6483.33Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGEDVKMIS EAPIVFSKACELFIEELT+RSWM+AMQSKKRMLHKEDVASAILATD+FDFLIGLIFHE+
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  -------AGEIADETTVSMP
               AG++A+  T+S+P
Subjt:  -------AGEIADETTVSMP

XP_038877432.1 nuclear transcription factor Y subunit C-1-like [Benincasa hispida]8.52e-6380.33Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGV+YWKTGPHSLPLARIKKIMKKSGE+VKMISGEAPIVFSKACELFIEELT+RSWM+AMQSKKRMLHKEDVASAILATD+FDFLIGLIF+E+
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  A---------GEIADETTVSMP
        A         G++A+   +S+P
Subjt:  A---------GEIADETTVSMP

TrEMBL top hitse value%identityAlignment
A0A0A0KZN6 CBFD_NFYB_HMF domain-containing protein3.63e-6382.91Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGV+YWKTGPHSLPLARIKKIMKKSGE+VKMISGEAPIVFSKACELFIEELT+RSWM+AMQSKKRMLHKEDVASAILATD+FDFLIGLIF+E+
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  A-----GEIADETTVSM
        A     G++ +  T+S+
Subjt:  A-----GEIADETTVSM

A0A1S3BSA0 nuclear transcription factor Y subunit C-1-like6.86e-6383.48Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGV+YWKTGPHSLPLARIKKIMKKSGE+VKMISGEAPIVFSKACELFIEELT+RSWM+AMQSKKRMLHKEDVASAILATD+FDFLIGLIF+E+
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  A---GEIADETTVSM
        A   G++ +   +S+
Subjt:  A---GEIADETTVSM

A0A5A7TSI3 Nuclear transcription factor Y subunit C-1-like6.86e-6383.48Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGV+YWKTGPHSLPLARIKKIMKKSGE+VKMISGEAPIVFSKACELFIEELT+RSWM+AMQSKKRMLHKEDVASAILATD+FDFLIGLIF+E+
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  A---GEIADETTVSM
        A   G++ +   +S+
Subjt:  A---GEIADETTVSM

A0A6J1C6K6 nuclear transcription factor Y subunit C-1-like1.50e-74100Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  AGEIADETTVSMP
        AGEIADETTVSMP
Subjt:  AGEIADETTVSMP

A0A6J1EZM2 nuclear transcription factor Y subunit C-4-like5.18e-6380.99Show/hide
Query:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES
        MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGEDVKMIS EAPIVFSKACELF+EELT+RSWM+AMQSKKRMLHKEDVASAILATD+FDFLIGLIFHE+
Subjt:  MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHES

Query:  --------AGEIADETTVSMP
                A E+ +  T+S+P
Subjt:  --------AGEIADETTVSMP

SwissProt top hitse value%identityAlignment
A6BLW4 Nuclear transcription factor Y subunit C-25.1e-2261.63Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGE
        H LPLARIKKIM K+ EDV+MIS EAP++F+KACELFI ELT RSW+ A ++K+R L + DVA+AI  TD+FDFL+ ++  E A E
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGE

Q655V5 Nuclear transcription factor Y subunit C-42.0e-2162.03Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLI
        HSLPLARIKKIM K+ EDV+MIS EAP++F+KACE+FI ELT RSWM   ++K+R L K D+A+AI  TD++DFL+ ++
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLI

Q8L4B2 Nuclear transcription factor Y subunit C-98.8e-2255.21Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTVSMP
        HSLPLARIKKIM K+ EDV+MIS EAP+VF++ACE+FI ELT RSW    ++K+R L K D+A+A+  TD+FDFL+ ++  E   ++ DE   S+P
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTVSMP

Q9FMV5 Nuclear transcription factor Y subunit C-43.9e-2260.67Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIAD
        H LPLARIKKIM K+ EDV+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K D+A+AI  TD+FDFL+ ++  E   E  D
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIAD

Q9SMP0 Nuclear transcription factor Y subunit C-12.3e-2260.22Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTV
        H LPLARIKKIM K+ EDV+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K D+A+AI  TD+FDFL+ ++  +   EI DE  V
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTV

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C96.2e-2355.21Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTVSMP
        HSLPLARIKKIM K+ EDV+MIS EAP+VF++ACE+FI ELT RSW    ++K+R L K D+A+A+  TD+FDFL+ ++  E   ++ DE   S+P
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTVSMP

AT1G08970.4 nuclear factor Y, subunit C96.2e-2355.21Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTVSMP
        HSLPLARIKKIM K+ EDV+MIS EAP+VF++ACE+FI ELT RSW    ++K+R L K D+A+A+  TD+FDFL+ ++  E   ++ DE   S+P
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTVSMP

AT3G48590.1 nuclear factor Y, subunit C11.6e-2360.22Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTV
        H LPLARIKKIM K+ EDV+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K D+A+AI  TD+FDFL+ ++  +   EI DE  V
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTV

AT5G63470.1 nuclear factor Y, subunit C42.8e-2360.67Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIAD
        H LPLARIKKIM K+ EDV+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K D+A+AI  TD+FDFL+ ++  E   E  D
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIAD

AT5G63470.2 nuclear factor Y, subunit C42.8e-2360.67Show/hide
Query:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIAD
        H LPLARIKKIM K+ EDV+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K D+A+AI  TD+FDFL+ ++  E   E  D
Subjt:  HSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAAGCGGGAGCGTATTCCGGCGTGTTGTACTGGAAAACAGGGCCGCACTCGCTGCCGCTGGCGAGAATCAAGAAGATCATGAAGAAGTCCGGCGAGGACGTGAA
GATGATTTCCGGCGAGGCTCCGATCGTGTTCTCCAAGGCGTGCGAGCTGTTCATCGAAGAATTGACGAGGAGATCGTGGATGGTCGCGATGCAGAGCAAGAAGAGGATGC
TCCACAAAGAGGACGTCGCCTCCGCGATCTTGGCCACCGATCTTTTCGATTTTCTGATCGGTTTGATTTTCCACGAATCCGCCGGCGAGATTGCCGATGAAACAACTGTA
TCCATGCCA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAAGCGGGAGCGTATTCCGGCGTGTTGTACTGGAAAACAGGGCCGCACTCGCTGCCGCTGGCGAGAATCAAGAAGATCATGAAGAAGTCCGGCGAGGACGTGAA
GATGATTTCCGGCGAGGCTCCGATCGTGTTCTCCAAGGCGTGCGAGCTGTTCATCGAAGAATTGACGAGGAGATCGTGGATGGTCGCGATGCAGAGCAAGAAGAGGATGC
TCCACAAAGAGGACGTCGCCTCCGCGATCTTGGCCACCGATCTTTTCGATTTTCTGATCGGTTTGATTTTCCACGAATCCGCCGGCGAGATTGCCGATGAAACAACTGTA
TCCATGCCA
Protein sequenceShow/hide protein sequence
MRQAGAYSGVLYWKTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFHESAGEIADETTV
SMP