CuGenDBv2

Gene ID	MC10g0698
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Transcription initiation factor IIE subunit beta
Genome location	MC10:5805491..5810343
RNA-Seq Expression	MC10g0698
Synteny	MC10g0698
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0005673 - transcription factor TFIIE complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function)
InterPro domains	IPR003166 - Transcription factor TFIIE beta subunit, DNA-binding domain IPR016656 - Transcription initiation factor TFIIE, beta subunit IPR040501 - TFA2, Winged helix domain 2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008452012.1 PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo]

2.05e-177

93.14

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Query:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC
        MALQ++LDRFKKQQERCQ+TL+GIAASKS   STPKFTPAPAA   RP APAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR A TPEQINEAC
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YP+VMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

XP_011653191.1 general transcription factor IIE subunit 2 [Cucumis sativus]

8.72e-179

93.14

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Query:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC
        MALQ++LDRFKKQQERCQ+TL+GIAASKS   STPKFTPAPAA   RPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR A TPEQINEAC
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYL+RKFPEGIAVIDLKD+YP+VMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

XP_022136771.1 general transcription factor IIE subunit 2-like [Momordica charantia]

2.68e-193

100

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Query:  MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYV
        MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYV
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYV

Query:  DINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD
        DINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD
Subjt:  DINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        DDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  DDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

XP_022984812.1 general transcription factor IIE subunit 2-like [Cucurbita maxima]

3.71e-177

93.12

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Query:  MALQDKLDRFKKQQERCQTTLTGIAASKSSST-PKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACY
        MALQ+KLDRFK+QQERCQTTL+GIAASK+++T P+FTPAPAA   RPPAPA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR A TPEQINEACY
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKSSST-PKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACY

Query:  VDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKV
        VDINSNKAVFDSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDSYP+VMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKV
Subjt:  VDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKV

Query:  DDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        DDDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  DDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

XP_038906431.1 general transcription factor IIE subunit 2-like [Benincasa hispida]

5.47e-177

93.5

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Query:  MALQDKLDRFKKQQERCQTTLTGIAASKSSS--TPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC
        MALQ++LDRFKKQQERCQTTL+GIAA+KS+S  TPKFTPAPAA   RPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR A TPEQINEAC
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKSSS--TPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAVFDSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YP+VMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPK KKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWU5 Transcription initiation factor IIE subunit beta

4.22e-179

93.14

Show/hide

Query:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC
        MALQ++LDRFKKQQERCQ+TL+GIAASKS   STPKFTPAPAA   RPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR A TPEQINEAC
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYL+RKFPEGIAVIDLKD+YP+VMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

A0A1S3BS95 Transcription initiation factor IIE subunit beta

9.94e-178

93.14

Show/hide

Query:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC
        MALQ++LDRFKKQQERCQ+TL+GIAASKS   STPKFTPAPAA   RP APAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR A TPEQINEAC
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YP+VMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

A0A5A7TNR4 Transcription initiation factor IIE subunit beta

9.94e-178

93.14

Show/hide

Query:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC
        MALQ++LDRFKKQQERCQ+TL+GIAASKS   STPKFTPAPAA   RP APAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR A TPEQINEAC
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKS--SSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEAC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YP+VMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

A0A6J1C4F9 Transcription initiation factor IIE subunit beta

1.30e-193

100

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Query:  MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYV
        MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYV
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYV

Query:  DINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD
        DINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD
Subjt:  DINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        DDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  DDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

A0A6J1J372 Transcription initiation factor IIE subunit beta

1.80e-177

93.12

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Query:  MALQDKLDRFKKQQERCQTTLTGIAASKSSST-PKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACY
        MALQ+KLDRFK+QQERCQTTL+GIAASK+++T P+FTPAPAA   RPPAPA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR A TPEQINEACY
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKSSST-PKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACY

Query:  VDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKV
        VDINSNKAVFDSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDSYP+VMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKV
Subjt:  VDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKV

Query:  DDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        DDDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  DDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

SwissProt top hits

e value

%identity

Alignment

P29084 Transcription initiation factor IIE subunit beta

3.9e-07

26.46

Show/hide

Query:  EQINEACYVDINSNK---AVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPE-GIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDI
        E ++E  ++DI   +    + ++L NNPK+     ++A+K K++++DK  LL L+ +  + G+  I L+D    +    +A+KA G   L  N   ++ I
Subjt:  EQINEACYVDINSNK---AVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPE-GIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDI

Query:  AYPNDPRIQIKVDDDLKILFREIEL-PRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
         + ND   Q  VD++ + L+R + +   D   +E+ L++ G+     +  ++  A      KP  +KK     +R K  N HL  + K+
Subjt:  AYPNDPRIQIKVDDDLKILFREIEL-PRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

P29540 General transcription factor IIE subunit 2

6.7e-07

26.67

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Query:  EQINEACYVDINSNK---AVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPE----GIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQ
        E ++E  ++DI   +    + ++L NNPK+     ++A+K K++LKDK  LL L+ K  +    GI + D+++  P      +A+KA G   +      +
Subjt:  EQINEACYVDINSNK---AVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPE----GIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQ

Query:  EDIAYPNDPRIQIKVDDDLKILFREIELPRDMLD---VEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRT-KLTNAHLPELFKN
        + I + ND   Q  VD++ + L+R +  P D +D   +E+ L++ G+     +  ++          P  K+KK    +R  K  N HL  + K+
Subjt:  EDIAYPNDPRIQIKVDDDLKILFREIELPRDMLD---VEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRT-KLTNAHLPELFKN

P79011 Transcription initiation factor IIE subunit beta

9.0e-12

29.27

Show/hide

Query:  AQIKRVIDLLLETRLAHTPEQINEACYVDINSNKAVFDSLRNNPKVHYDGRR--FAYKSKHDLKDKSQLLYLI--RKFPEGIAVIDLKDSYPTVMEDLQA
        +Q+   ++ L E     T E+I  A Y+       + + L+ N +++YD R   F +K  H+++  + LL  +  +K   G+++ +L+D +P V  +L+ 
Subjt:  AQIKRVIDLLLETRLAHTPEQINEACYVDINSNKAVFDSLRNNPKVHYDGRR--FAYKSKHDLKDKSQLLYLI--RKFPEGIAVIDLKDSYPTVMEDLQA

Query:  LKASGQVWLL-SNFDSQEDIAYPNDPRIQIKVDDDLKILFREIELPRDMLDVEKDLQKNGMKPAT---NTAKRRANAQHVASSKPKPKKKKQEISKRTKL
        L+  G+V LL +  D    + + ND      VD + + ++ EI +P   LD+  +L K G+KP +   +T KR  + Q      PK KK K   ++R K+
Subjt:  LKASGQVWLL-SNFDSQEDIAYPNDPRIQIKVDDDLKILFREIELPRDMLDVEKDLQKNGMKPAT---NTAKRRANAQHVASSKPKPKKKKQEISKRTKL

Query:  TNAHL
        TN HL
Subjt:  TNAHL

Q2KJF9 General transcription factor IIE subunit 2

1.0e-07

27.51

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Query:  EQINEACYVDINSNK---AVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPE-GIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDI
        E ++E  ++DI   +    + ++L NNPK+     ++A+K K++LKDK  LL L+ +  + G+  I L+D    +    +A+KA G   L  N   ++ I
Subjt:  EQINEACYVDINSNK---AVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPE-GIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDI

Query:  AYPNDPRIQIKVDDDLKILFREIEL-PRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
         + ND   Q  VD++ + L+R + +   D   +E+ L++ G+    ++  ++  A      KP  +KK     +R K  N HL  + K+
Subjt:  AYPNDPRIQIKVDDDLKILFREIEL-PRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

Q9D902 General transcription factor IIE subunit 2

5.1e-07

26.98

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Query:  EQINEACYVDINSNK---AVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPE-GIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDI
        E ++E  ++DI   +    + ++L NNPK+     ++A+K K++LKDK  LL L+    + G+  I L+D    +    +A+KA G   L  +   ++ I
Subjt:  EQINEACYVDINSNK---AVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPE-GIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDI

Query:  AYPNDPRIQIKVDDDLKILFREIEL-PRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
         + ND   Q  VD++ + L+R + +   D   +E+ L++ G+     ++ + +  + VAS + + K   Q+  +R K  N HL  + K+
Subjt:  AYPNDPRIQIKVDDDLKILFREIEL-PRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

Arabidopsis top hits

e value

%identity

Alignment

AT4G20330.1 Transcription initiation factor TFIIE, beta subunit

1.9e-97

68.57

Show/hide

Query:  MALQDKLDRFKKQQERCQTTLTGIAAS--KSSSTPKFTPAPAA-PNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEA
        MAL+++LD+F KQQ +CQ+TL+ IA+S  ++SS+ +  P PAA    +P A  VKFS+DTERLQ+IN+IRK+PVGAQIKRVIDLL E RLA TPEQINE 
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAAS--KSSSTPKFTPAPAA-PNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEA

Query:  CYVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQI
        C+VD+++NKAVFDSLR NPK HYDGRRF+YK+ HD+ DK+QLL L+RK+ +GIAV+DLKD+YP VMEDL+AL ASG ++LLSN  SQEDIAYPND + +I
Subjt:  CYVDINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQI

Query:  KVDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN
        KVDD+ K LFR+I +P DMLDVEK+L K G+KPATNTA+RRA AQ H  S+KPK  KKKKQEISKRTKLTNAHLPELF+N
Subjt:  KVDDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN

AT4G21010.1 Transcription initiation factor TFIIE, beta subunit

6.0e-80

58.63

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Query:  MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYV
        MAL+++LD+F KQQE+CQ+TL+ I++S+++ +  + PA A  + +P     KFS +T++LQHI +IR S VGAQ+K VIDLL +TRLA+T EQINEACYV
Subjt:  MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYV

Query:  DINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQV-WLLSNFDSQEDIAYPNDPRIQIKV
        D+++NKAVFDSLR NPKVHYDGRRF+YK+ H++KDK QLL  + K  + I V DLKD+YP VMEDL++LK+SG++ WLLSN DS+E   Y N+     K+
Subjt:  DINSNKAVFDSLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQV-WLLSNFDSQEDIAYPNDPRIQIKV

Query:  DDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN
        DD+LK LFR+I +P DML+VEK+L K G+KPATN A+RRA  Q H  S+KPK  KKKK+EI+ RTKLTN+H+ ELF++
Subjt:  DDDLKILFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN

Sequences

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CDS sequence

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ATGGCGTTGCAAGATAAGCTAGACAGGTTCAAGAAACAGCAAGAACGGTGTCAGACTACCTTGACTGGCATTGCTGCATCCAAGTCTTCCTCCACACCCAAGTTTACGCC
TGCACCAGCTGCTCCCAATGGAAGACCTCCGGCTCCTGCTGTAAAGTTCTCCAATGATACCGAGAGACTTCAACATATTAACAGCATTAGGAAATCTCCTGTTGGGGCTC
AGATCAAGCGGGTTATTGACCTGCTGCTGGAGACAAGGCTAGCCCATACACCAGAGCAAATCAATGAAGCGTGTTATGTTGATATAAATTCCAACAAAGCTGTTTTTGAT
AGTCTGCGGAATAACCCAAAGGTGCACTATGATGGGAGGCGTTTCGCATACAAGTCCAAGCATGATTTAAAGGATAAGAGTCAACTTCTGTACTTGATACGGAAATTTCC
AGAAGGCATTGCTGTCATTGATCTCAAGGATTCTTATCCAACCGTTATGGAAGACTTGCAAGCCCTAAAAGCCTCAGGCCAGGTTTGGCTTCTCTCAAACTTTGATTCAC
AAGAAGATATTGCATACCCAAACGATCCTAGAATTCAAATCAAGGTAGATGACGATCTGAAGATACTTTTTCGGGAGATTGAGTTACCTCGTGACATGCTCGATGTTGAG
AAGGATCTTCAAAAGAATGGGATGAAGCCTGCAACCAACACGGCCAAGAGGCGAGCCAACGCACAACATGTGGCATCCTCAAAGCCGAAGCCCAAGAAAAAGAAGCAAGA
GATCAGCAAGAGGACTAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAAAAATTAG

mRNA sequence

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ATCAAATTAACTAGTTTAGGTTAATTATTTAAAACAATTGAATTATTTTTGTTTTTAAAAAATCAGCCAACCCAAGAAGAGCTTTTATTACATGTATCCTTCACAAAATG
TTGGAGGTTGAAAATTTCGCCTCATAGGTTGAACTAAATAAAAGAAAAAATGGAATCTTTTTAATATAGTTCAATTAAAAAAATAGAAAACCGAACCATACCATACCTGA
ACCAGAATGAAAATGAGTTTTGCTCAATAATGAAAATTGATTCGGTTCTCCAATGTCGAATCCTCCGGGCCGAAAATTGGTCCATTCTCGTTCTATCTCCTGCATTGAAT
CCGCTAATACAGTGTATGGGCCGTCGCCGCATCCCATTTTAATCTTCATCACAGCTCCCATCATCTCCTGTCTCTCGCTCTCTCGTTCCCAATTCCAGCCTTCTTCTTCA
ACCCCATAGCTGCACAAACTGAACCCGATACAACGATCGGATTATTGAACATTTACTCCGTCGTCTTATCCACGGCGGTCGATTTTGTTTAACCGATGCAATTTTGAGGG
TTGAATTTTGGAAAGGTTGAGAATTTGAAACTCTGGGGGATTAGATGGCGTTGCAAGATAAGCTAGACAGGTTCAAGAAACAGCAAGAACGGTGTCAGACTACCTTGACT
GGCATTGCTGCATCCAAGTCTTCCTCCACACCCAAGTTTACGCCTGCACCAGCTGCTCCCAATGGAAGACCTCCGGCTCCTGCTGTAAAGTTCTCCAATGATACCGAGAG
ACTTCAACATATTAACAGCATTAGGAAATCTCCTGTTGGGGCTCAGATCAAGCGGGTTATTGACCTGCTGCTGGAGACAAGGCTAGCCCATACACCAGAGCAAATCAATG
AAGCGTGTTATGTTGATATAAATTCCAACAAAGCTGTTTTTGATAGTCTGCGGAATAACCCAAAGGTGCACTATGATGGGAGGCGTTTCGCATACAAGTCCAAGCATGAT
TTAAAGGATAAGAGTCAACTTCTGTACTTGATACGGAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAGGATTCTTATCCAACCGTTATGGAAGACTTGCAAGCCCT
AAAAGCCTCAGGCCAGGTTTGGCTTCTCTCAAACTTTGATTCACAAGAAGATATTGCATACCCAAACGATCCTAGAATTCAAATCAAGGTAGATGACGATCTGAAGATAC
TTTTTCGGGAGATTGAGTTACCTCGTGACATGCTCGATGTTGAGAAGGATCTTCAAAAGAATGGGATGAAGCCTGCAACCAACACGGCCAAGAGGCGAGCCAACGCACAA
CATGTGGCATCCTCAAAGCCGAAGCCCAAGAAAAAGAAGCAAGAGATCAGCAAGAGGACTAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAAAAATTAGACAACCAT
TACCGTACGTTTATACGGTTATCTGTAGGGTGTGATACAACAATATACTTATGCATAGTTGATGGACTCTGTAGATAGCATTCTCCATCCCTTCTGTTTGATGTATTGTC
CTTTTCTGTTTTCTTGAGATCATCAGAGAATTAAATGCTCCTATGGTAACTTTTGTGTATGCTTTTACTTCAATTAATTGAACAATTGAAATATAAGAGATAAGCTCAAT
CTAGATATGATATATGACATGAGAAATTTATCATATATGTAAACTTTTAAATTTTATTATTTCAAGTTCATTTGGTGTTAGAAGAATTCATGTGTATTGTAAGTTATAAC
TATTCC

Protein sequence

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MALQDKLDRFKKQQERCQTTLTGIAASKSSSTPKFTPAPAAPNGRPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRLAHTPEQINEACYVDINSNKAVFD
SLRNNPKVHYDGRRFAYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDLKILFREIELPRDMLDVE
KDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

MC10g0698 (gene) of Bitter gourd (Dali-11) v1 genome