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MC10g0812 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0812
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiontranscription initiation factor TFIID subunit 14b
Genome locationMC10:6863671..6863889
RNA-Seq ExpressionMC10g0812
SyntenyMC10g0812
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR005033 - YEATS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134869.1 transcription initiation factor TFIID subunit 14b [Cucumis sativus]2.32e-1658.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

XP_008440809.1 PREDICTED: transcription initiation factor TFIID subunit 14b isoform X3 [Cucumis melo]2.32e-1658.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

XP_016899133.1 PREDICTED: transcription initiation factor TFIID subunit 14b isoform X2 [Cucumis melo]2.47e-1658.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

XP_022979048.1 transcription initiation factor TFIID subunit 14b-like isoform X1 [Cucurbita maxima]2.20e-1658.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

XP_022979050.1 transcription initiation factor TFIID subunit 14b-like isoform X2 [Cucurbita maxima]1.45e-1658.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

TrEMBL top hitse value%identityAlignment
A0A0A0KJC2 Uncharacterized protein1.12e-1658.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

A0A1S3B2R3 transcription initiation factor TFIID subunit 14b isoform X31.12e-1658.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

A0A5A7SJ54 Transcription initiation factor TFIID subunit 14b isoform X31.12e-1658.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

A0A6J1IS36 transcription initiation factor TFIID subunit 14b-like isoform X27.03e-1758.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

A0A6J1IV07 transcription initiation factor TFIID subunit 14b-like isoform X11.06e-1658.67Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN
        L FHSDV DKQL+LFHH  LYP+DE GPQT +KPVV ESYNEIVFP+PS+ F   + +  ++        FNLPN
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKPVV-ESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN

SwissProt top hitse value%identityAlignment
F4IPK2 Transcription initiation factor TFIID subunit 144.8e-0546.3Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGP---QTRKPVV-ESYNEIVFPNPSDFF
        + FH+DV +K+L L H   L P++ +GP     + PVV ESYNE+VFP+P + F
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGP---QTRKPVV-ESYNEIVFPNPSDFF

Q9FH40 Transcription initiation factor TFIID subunit 14b3.4e-1167.31Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKP-VVESYNEIVFPNPSDFF
        L FHSDV DK L+L+HH  LYP+DE GP T +KP VVESY+EIVFP+PS+ F
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKP-VVESYNEIVFPNPSDFF

Arabidopsis top hitse value%identityAlignment
AT2G18000.1 TBP-associated factor 143.4e-0646.3Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGP---QTRKPVV-ESYNEIVFPNPSDFF
        + FH+DV +K+L L H   L P++ +GP     + PVV ESYNE+VFP+P + F
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGP---QTRKPVV-ESYNEIVFPNPSDFF

AT2G18000.2 TBP-associated factor 143.4e-0646.3Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGP---QTRKPVV-ESYNEIVFPNPSDFF
        + FH+DV +K+L L H   L P++ +GP     + PVV ESYNE+VFP+P + F
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGP---QTRKPVV-ESYNEIVFPNPSDFF

AT5G45600.1 YEATS family protein2.4e-1267.31Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKP-VVESYNEIVFPNPSDFF
        L FHSDV DK L+L+HH  LYP+DE GP T +KP VVESY+EIVFP+PS+ F
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKP-VVESYNEIVFPNPSDFF

AT5G45600.2 YEATS family protein2.4e-1267.31Show/hide
Query:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKP-VVESYNEIVFPNPSDFF
        L FHSDV DK L+L+HH  LYP+DE GP T +KP VVESY+EIVFP+PS+ F
Subjt:  LLFHSDVFDKQLNLFHHFMLYPKDEFGPQT-RKP-VVESYNEIVFPNPSDFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCTTTTCCACAGTGATGTATTTGATAAACAGTTAAATCTGTTTCACCATTTCATGTTGTACCCTAAAGATGAGTTTGGTCCACAAACAAGGAAACCTGTTGTGGAATC
CTACAATGAAATTGTGTTTCCTAATCCATCAGATTTTTTCCCTTTTTGGCTCGTATCCAGAGCCTCCATCTATTGTTGTCCCAGCTTCCTTGATTTTAATTTGCCTAAT
mRNA sequenceShow/hide mRNA sequence
CTTCTTTTCCACAGTGATGTATTTGATAAACAGTTAAATCTGTTTCACCATTTCATGTTGTACCCTAAAGATGAGTTTGGTCCACAAACAAGGAAACCTGTTGTGGAATC
CTACAATGAAATTGTGTTTCCTAATCCATCAGATTTTTTCCCTTTTTGGCTCGTATCCAGAGCCTCCATCTATTGTTGTCCCAGCTTCCTTGATTTTAATTTGCCTAAT
Protein sequenceShow/hide protein sequence
LLFHSDVFDKQLNLFHHFMLYPKDEFGPQTRKPVVESYNEIVFPNPSDFFPFWLVSRASIYCCPSFLDFNLPN